EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000009682 (Gene tree)
Gene ID: 101172890
Gene Symbol: swt1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 17481 bases
Position: chr4:15239487-15256967
Accession: 101172890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000012145	PIN_4	PF13638.6	7.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012146	-	2892	XM_011474081	ENSORLP00000012145	963 (aa)	XP_011472383	H2M164

Gene Model

Click here to download ENSORLG00000009682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009682	swt1	58	33.621	ENSG00000116668	SWT1	59	33.621	Homo_sapiens
ENSORLG00000009682	swt1	97	50.051	ENSAPOG00000014897	-	99	50.151	Acanthochromis_polyacanthus
ENSORLG00000009682	swt1	58	33.333	ENSAMEG00000013585	SWT1	60	33.333	Ailuropoda_melanoleuca
ENSORLG00000009682	swt1	97	50.304	ENSAOCG00000013932	swt1	99	50.399	Amphiprion_ocellaris
ENSORLG00000009682	swt1	97	50.407	ENSAPEG00000009613	-	99	50.500	Amphiprion_percula
ENSORLG00000009682	swt1	97	50.868	ENSATEG00000018946	swt1	98	50.868	Anabas_testudineus
ENSORLG00000009682	swt1	58	37.306	ENSAPLG00000008607	SWT1	74	37.306	Anas_platyrhynchos
ENSORLG00000009682	swt1	58	34.729	ENSACAG00000002276	SWT1	62	34.790	Anolis_carolinensis
ENSORLG00000009682	swt1	58	33.390	ENSANAG00000027068	SWT1	59	33.390	Aotus_nancymaae
ENSORLG00000009682	swt1	80	61.581	ENSACLG00000009742	swt1	93	62.247	Astatotilapia_calliptera
ENSORLG00000009682	swt1	65	44.828	ENSAMXG00000010971	swt1	70	41.643	Astyanax_mexicanus
ENSORLG00000009682	swt1	58	32.818	ENSCJAG00000005544	SWT1	59	32.818	Callithrix_jacchus
ENSORLG00000009682	swt1	58	33.162	ENSCAFG00000013543	SWT1	60	32.920	Canis_familiaris
ENSORLG00000009682	swt1	58	33.162	ENSCAFG00020015648	SWT1	63	33.162	Canis_lupus_dingo
ENSORLG00000009682	swt1	59	33.844	ENSCHIG00000023511	SWT1	93	33.844	Capra_hircus
ENSORLG00000009682	swt1	58	33.162	ENSTSYG00000010470	SWT1	60	33.162	Carlito_syrichta
ENSORLG00000009682	swt1	54	33.517	ENSCPOG00000014251	SWT1	62	33.517	Cavia_porcellus
ENSORLG00000009682	swt1	58	33.562	ENSCCAG00000033926	SWT1	59	33.562	Cebus_capucinus
ENSORLG00000009682	swt1	59	34.247	ENSCATG00000042210	SWT1	92	34.247	Cercocebus_atys
ENSORLG00000009682	swt1	58	34.075	ENSCLAG00000013959	SWT1	61	34.075	Chinchilla_lanigera
ENSORLG00000009682	swt1	58	34.021	ENSCSAG00000012895	SWT1	60	34.021	Chlorocebus_sabaeus
ENSORLG00000009682	swt1	58	36.644	ENSCPBG00000015691	SWT1	60	36.473	Chrysemys_picta_bellii
ENSORLG00000009682	swt1	58	33.448	ENSCANG00000032207	SWT1	92	33.276	Colobus_angolensis_palliatus
ENSORLG00000009682	swt1	62	33.981	ENSCGRG00001022955	Swt1	66	33.981	Cricetulus_griseus_chok1gshd
ENSORLG00000009682	swt1	62	33.981	ENSCGRG00000010224	Swt1	64	33.981	Cricetulus_griseus_crigri
ENSORLG00000009682	swt1	64	57.166	ENSCSEG00000017352	swt1	92	52.566	Cynoglossus_semilaevis
ENSORLG00000009682	swt1	59	46.341	ENSDARG00000094010	swt1	56	46.341	Danio_rerio
ENSORLG00000009682	swt1	50	33.600	ENSDNOG00000005254	SWT1	57	33.600	Dasypus_novemcinctus
ENSORLG00000009682	swt1	58	33.564	ENSDORG00000010531	Swt1	64	33.737	Dipodomys_ordii
ENSORLG00000009682	swt1	58	33.333	ENSEASG00005005530	SWT1	63	33.333	Equus_asinus_asinus
ENSORLG00000009682	swt1	58	32.358	ENSECAG00000012085	SWT1	63	32.358	Equus_caballus
ENSORLG00000009682	swt1	65	47.582	ENSELUG00000020565	swt1	61	48.062	Esox_lucius
ENSORLG00000009682	swt1	58	32.474	ENSFCAG00000011286	SWT1	60	32.474	Felis_catus
ENSORLG00000009682	swt1	59	35.605	ENSFALG00000003206	SWT1	61	35.605	Ficedula_albicollis
ENSORLG00000009682	swt1	58	33.791	ENSFDAG00000007569	SWT1	61	33.791	Fukomys_damarensis
ENSORLG00000009682	swt1	58	35.112	ENSGALG00000034230	SWT1	62	35.628	Gallus_gallus
ENSORLG00000009682	swt1	93	48.353	ENSGAFG00000007803	-	96	48.033	Gambusia_affinis
ENSORLG00000009682	swt1	62	36.020	ENSGAGG00000025050	SWT1	93	36.602	Gopherus_agassizii
ENSORLG00000009682	swt1	53	33.396	ENSGGOG00000041167	-	89	33.396	Gorilla_gorilla
ENSORLG00000009682	swt1	84	61.458	ENSHBUG00000006188	swt1	94	62.087	Haplochromis_burtoni
ENSORLG00000009682	swt1	58	34.251	ENSHGLG00000006542	SWT1	63	34.251	Heterocephalus_glaber_female
ENSORLG00000009682	swt1	58	34.251	ENSHGLG00100014408	SWT1	61	34.251	Heterocephalus_glaber_male
ENSORLG00000009682	swt1	84	38.160	ENSIPUG00000009113	-	79	38.358	Ictalurus_punctatus
ENSORLG00000009682	swt1	58	33.562	ENSSTOG00000010356	SWT1	61	33.562	Ictidomys_tridecemlineatus
ENSORLG00000009682	swt1	58	34.364	ENSJJAG00000015927	Swt1	63	34.364	Jaculus_jaculus
ENSORLG00000009682	swt1	99	49.448	ENSKMAG00000012533	swt1	98	49.437	Kryptolebias_marmoratus
ENSORLG00000009682	swt1	93	48.247	ENSLBEG00000020663	-	97	47.347	Labrus_bergylta
ENSORLG00000009682	swt1	59	36.897	ENSLACG00000009194	SWT1	79	36.897	Latimeria_chalumnae
ENSORLG00000009682	swt1	97	32.628	ENSLOCG00000001749	swt1	97	40.459	Lepisosteus_oculatus
ENSORLG00000009682	swt1	58	33.220	ENSLAFG00000004346	-	93	33.220	Loxodonta_africana
ENSORLG00000009682	swt1	59	33.562	ENSMFAG00000031793	SWT1	93	33.562	Macaca_fascicularis
ENSORLG00000009682	swt1	58	33.276	ENSMMUG00000013882	SWT1	92	33.276	Macaca_mulatta
ENSORLG00000009682	swt1	59	33.904	ENSMNEG00000035502	SWT1	93	33.904	Macaca_nemestrina
ENSORLG00000009682	swt1	59	33.904	ENSMLEG00000038692	SWT1	92	33.904	Mandrillus_leucophaeus
ENSORLG00000009682	swt1	84	61.458	ENSMZEG00005018489	swt1	93	62.087	Maylandia_zebra
ENSORLG00000009682	swt1	58	36.134	ENSMGAG00000000973	SWT1	93	36.134	Meleagris_gallopavo
ENSORLG00000009682	swt1	62	31.466	ENSMAUG00000007996	Swt1	60	31.466	Mesocricetus_auratus
ENSORLG00000009682	swt1	58	33.793	ENSMICG00000014975	SWT1	60	33.793	Microcebus_murinus
ENSORLG00000009682	swt1	62	34.142	ENSMOCG00000009776	Swt1	63	34.142	Microtus_ochrogaster
ENSORLG00000009682	swt1	64	31.638	ENSMODG00000007472	SWT1	64	31.638	Monodelphis_domestica
ENSORLG00000009682	swt1	98	47.143	ENSMALG00000019308	swt1	94	48.291	Monopterus_albus
ENSORLG00000009682	swt1	58	34.708	MGP_CAROLIEiJ_G0014692	Swt1	62	46.497	Mus_caroli
ENSORLG00000009682	swt1	58	34.423	ENSMUSG00000052748	Swt1	62	45.223	Mus_musculus
ENSORLG00000009682	swt1	58	34.991	MGP_PahariEiJ_G0027928	Swt1	63	45.283	Mus_pahari
ENSORLG00000009682	swt1	58	35.000	MGP_SPRETEiJ_G0015499	Swt1	62	45.860	Mus_spretus
ENSORLG00000009682	swt1	58	33.505	ENSMPUG00000011913	SWT1	60	33.505	Mustela_putorius_furo
ENSORLG00000009682	swt1	62	32.432	ENSMLUG00000001142	SWT1	63	32.432	Myotis_lucifugus
ENSORLG00000009682	swt1	62	33.819	ENSNGAG00000021080	Swt1	63	33.549	Nannospalax_galili
ENSORLG00000009682	swt1	58	32.988	ENSNLEG00000018031	SWT1	59	32.988	Nomascus_leucogenys
ENSORLG00000009682	swt1	87	60.702	ENSONIG00000009994	swt1	96	60.702	Oreochromis_niloticus
ENSORLG00000009682	swt1	58	33.562	ENSOANG00000001013	-	69	33.562	Ornithorhynchus_anatinus
ENSORLG00000009682	swt1	61	32.790	ENSOCUG00000004901	SWT1	64	32.790	Oryctolagus_cuniculus
ENSORLG00000009682	swt1	100	96.781	ENSORLG00020011654	swt1	100	96.781	Oryzias_latipes_hni
ENSORLG00000009682	swt1	99	97.604	ENSORLG00015007734	swt1	100	97.604	Oryzias_latipes_hsok
ENSORLG00000009682	swt1	98	71.575	ENSOMEG00000006607	swt1	99	71.643	Oryzias_melastigma
ENSORLG00000009682	swt1	58	33.907	ENSOGAG00000016195	SWT1	60	33.907	Otolemur_garnettii
ENSORLG00000009682	swt1	58	33.621	ENSOARG00000004156	SWT1	59	33.621	Ovis_aries
ENSORLG00000009682	swt1	58	33.621	ENSPPAG00000021400	SWT1	59	33.621	Pan_paniscus
ENSORLG00000009682	swt1	58	32.646	ENSPPRG00000023754	SWT1	60	32.646	Panthera_pardus
ENSORLG00000009682	swt1	58	32.646	ENSPTIG00000021889	SWT1	60	32.646	Panthera_tigris_altaica
ENSORLG00000009682	swt1	58	33.966	ENSPTRG00000001777	SWT1	59	33.966	Pan_troglodytes
ENSORLG00000009682	swt1	59	33.733	ENSPANG00000005099	SWT1	92	33.733	Papio_anubis
ENSORLG00000009682	swt1	60	46.564	ENSPKIG00000005979	swt1	58	46.392	Paramormyrops_kingsleyae
ENSORLG00000009682	swt1	58	36.519	ENSPSIG00000008961	SWT1	60	36.519	Pelodiscus_sinensis
ENSORLG00000009682	swt1	58	34.483	ENSPEMG00000008208	Swt1	59	34.483	Peromyscus_maniculatus_bairdii
ENSORLG00000009682	swt1	64	32.615	ENSPCIG00000002443	SWT1	65	32.615	Phascolarctos_cinereus
ENSORLG00000009682	swt1	99	47.752	ENSPFOG00000010988	-	96	48.201	Poecilia_formosa
ENSORLG00000009682	swt1	99	47.752	ENSPLAG00000022908	-	96	48.201	Poecilia_latipinna
ENSORLG00000009682	swt1	99	47.557	ENSPMEG00000006943	-	96	48.000	Poecilia_mexicana
ENSORLG00000009682	swt1	65	42.534	ENSPREG00000014723	-	86	42.992	Poecilia_reticulata
ENSORLG00000009682	swt1	58	33.621	ENSPPYG00000000415	SWT1	59	33.621	Pongo_abelii
ENSORLG00000009682	swt1	58	30.637	ENSPVAG00000005968	SWT1	60	30.637	Pteropus_vampyrus
ENSORLG00000009682	swt1	84	61.458	ENSPNYG00000012934	swt1	93	62.087	Pundamilia_nyererei
ENSORLG00000009682	swt1	59	47.735	ENSPNAG00000017795	swt1	57	47.735	Pygocentrus_nattereri
ENSORLG00000009682	swt1	68	32.900	ENSRNOG00000032258	Swt1	73	32.900	Rattus_norvegicus
ENSORLG00000009682	swt1	58	33.333	ENSRBIG00000040630	SWT1	92	33.161	Rhinopithecus_bieti
ENSORLG00000009682	swt1	68	31.384	ENSSBOG00000028825	SWT1	73	31.294	Saimiri_boliviensis_boliviensis
ENSORLG00000009682	swt1	58	34.576	ENSSHAG00000009241	SWT1	60	34.576	Sarcophilus_harrisii
ENSORLG00000009682	swt1	59	47.049	ENSSFOG00015004895	swt1	56	47.049	Scleropages_formosus
ENSORLG00000009682	swt1	97	50.612	ENSSDUG00000012345	swt1	99	50.451	Seriola_dumerili
ENSORLG00000009682	swt1	96	50.562	ENSSLDG00000003821	swt1	99	50.406	Seriola_lalandi_dorsalis
ENSORLG00000009682	swt1	58	35.385	ENSSPUG00000003899	SWT1	59	35.385	Sphenodon_punctatus
ENSORLG00000009682	swt1	98	51.172	ENSSPAG00000001030	swt1	99	51.205	Stegastes_partitus
ENSORLG00000009682	swt1	59	33.390	ENSSSCG00000015569	SWT1	62	33.733	Sus_scrofa
ENSORLG00000009682	swt1	58	36.159	ENSTGUG00000003718	-	97	36.159	Taeniopygia_guttata
ENSORLG00000009682	swt1	99	42.427	ENSTRUG00000006420	swt1	96	42.560	Takifugu_rubripes
ENSORLG00000009682	swt1	58	33.103	ENSTTRG00000005914	SWT1	60	33.103	Tursiops_truncatus
ENSORLG00000009682	swt1	58	33.448	ENSUAMG00000020937	SWT1	65	32.931	Ursus_americanus
ENSORLG00000009682	swt1	58	33.448	ENSUMAG00000021918	SWT1	61	33.215	Ursus_maritimus
ENSORLG00000009682	swt1	58	33.333	ENSVVUG00000009182	SWT1	62	33.333	Vulpes_vulpes
ENSORLG00000009682	swt1	99	47.538	ENSXMAG00000023472	-	96	48.087	Xiphophorus_maculatus