EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000009739 (Gene tree)
Gene ID
101163899
Gene Symbol
YTHDF1 (1 of many)
Alias
-
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
6277 bases
Position
chr7:15835551-15841827
Accession
101163899
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000027227YTHPF04146.155.8e-4111
ENSORLP00000012218YTHPF04146.156.6e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000012219YTHDF1 (1 of many)-2011839XM_004070509ENSORLP00000012218612 (aa)XP_004070557H2M1D5
ENSORLT00000038600YTHDF1 (1 of many)-2021671-ENSORLP00000027227556 (aa)--
Gene Model
Click here to download ENSORLG00000009739's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009739's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000009739YTHDF19975.684ENSORLG00000014665YTHDF19973.975
ENSORLG00000009739YTHDF19959.113ENSORLG00000008640ythdf39959.612
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000009739YTHDF19973.016ENSG00000149658YTHDF19773.477Homo_sapiens
ENSORLG00000009739YTHDF19976.358ENSAPOG00000004358ythdf19976.984Acanthochromis_polyacanthus
ENSORLG00000009739YTHDF110093.042ENSAPOG00000010796YTHDF110091.572Acanthochromis_polyacanthus
ENSORLG00000009739YTHDF19974.686ENSAMEG00000017323YTHDF19672.775Ailuropoda_melanoleuca
ENSORLG00000009739YTHDF19991.863ENSACIG00000020083YTHDF19791.682Amphilophus_citrinellus
ENSORLG00000009739YTHDF19677.717ENSACIG00000011264ythdf19477.818Amphilophus_citrinellus
ENSORLG00000009739YTHDF110092.880ENSAOCG00000012567YTHDF110091.410Amphiprion_ocellaris
ENSORLG00000009739YTHDF19976.228ENSAOCG00000022251ythdf19977.759Amphiprion_ocellaris
ENSORLG00000009739YTHDF19976.228ENSAPEG00000021878ythdf19976.960Amphiprion_percula
ENSORLG00000009739YTHDF110093.042ENSAPEG00000008750YTHDF110091.572Amphiprion_percula
ENSORLG00000009739YTHDF19975.923ENSATEG00000023840ythdf19976.190Anabas_testudineus
ENSORLG00000009739YTHDF110092.395ENSATEG00000005996YTHDF110092.395Anabas_testudineus
ENSORLG00000009739YTHDF19975.801ENSAPLG00000005985YTHDF19776.165Anas_platyrhynchos
ENSORLG00000009739YTHDF19975.850ENSACAG00000005560YTHDF19775.806Anolis_carolinensis
ENSORLG00000009739YTHDF19961.580ENSANAG00000021022-10058.929Aotus_nancymaae
ENSORLG00000009739YTHDF19974.061ENSANAG00000034786-10073.524Aotus_nancymaae
ENSORLG00000009739YTHDF110091.586ENSACLG00000025518YTHDF110091.424Astatotilapia_calliptera
ENSORLG00000009739YTHDF19973.975ENSBTAG00000010383YTHDF110072.710Bos_taurus
ENSORLG00000009739YTHDF19971.552ENSCJAG00000010056YTHDF19773.656Callithrix_jacchus
ENSORLG00000009739YTHDF19374.379ENSCAFG00000012772YTHDF19974.187Canis_familiaris
ENSORLG00000009739YTHDF19374.379ENSCAFG00020001214YTHDF19974.187Canis_lupus_dingo
ENSORLG00000009739YTHDF19974.061ENSCHIG00000026494YTHDF19872.809Capra_hircus
ENSORLG00000009739YTHDF19973.227ENSTSYG00000033436YTHDF19773.788Carlito_syrichta
ENSORLG00000009739YTHDF19972.193ENSCAPG00000002544YTHDF19372.531Cavia_aperea
ENSORLG00000009739YTHDF19972.727ENSCPOG00000010202YTHDF19773.070Cavia_porcellus
ENSORLG00000009739YTHDF19973.477ENSCCAG00000024650YTHDF19773.477Cebus_capucinus
ENSORLG00000009739YTHDF19974.464ENSCATG00000033272YTHDF19774.373Cercocebus_atys
ENSORLG00000009739YTHDF19973.750ENSCLAG00000005989YTHDF19873.393Chinchilla_lanigera
ENSORLG00000009739YTHDF19974.464ENSCSAG00000016266YTHDF19774.373Chlorocebus_sabaeus
ENSORLG00000009739YTHDF19975.000ENSCPBG00000027183YTHDF19775.719Chrysemys_picta_bellii
ENSORLG00000009739YTHDF19974.286ENSCANG00000029082YTHDF19774.194Colobus_angolensis_palliatus
ENSORLG00000009739YTHDF19974.910ENSCGRG00001016568Ythdf19774.506Cricetulus_griseus_chok1gshd
ENSORLG00000009739YTHDF19974.910ENSCGRG00000009207Ythdf19974.506Cricetulus_griseus_crigri
ENSORLG00000009739YTHDF19678.598ENSCSEG00000020623YTHDF19976.174Cynoglossus_semilaevis
ENSORLG00000009739YTHDF19878.022ENSCVAG00000017940ythdf19975.240Cyprinodon_variegatus
ENSORLG00000009739YTHDF110091.734ENSCVAG00000014378YTHDF110091.248Cyprinodon_variegatus
ENSORLG00000009739YTHDF110080.096ENSDARG00000016447ythdf110080.937Danio_rerio
ENSORLG00000009739YTHDF19974.250ENSDNOG00000043590YTHDF19775.269Dasypus_novemcinctus
ENSORLG00000009739YTHDF110072.014ENSDORG00000002879Ythdf19571.836Dipodomys_ordii
ENSORLG00000009739YTHDF19554.266ENSETEG00000017860-9555.477Echinops_telfairi
ENSORLG00000009739YTHDF19974.821ENSEASG00005023186YTHDF19775.360Equus_asinus_asinus
ENSORLG00000009739YTHDF19774.229ENSECAG00000019475YTHDF110075.000Equus_caballus
ENSORLG00000009739YTHDF19474.813ENSEEUG00000007461YTHDF110074.528Erinaceus_europaeus
ENSORLG00000009739YTHDF19979.621ENSELUG00000022768ythdf19978.989Esox_lucius
ENSORLG00000009739YTHDF19979.109ENSELUG00000001906YTHDF19982.931Esox_lucius
ENSORLG00000009739YTHDF19975.045ENSFCAG00000008917YTHDF19775.045Felis_catus
ENSORLG00000009739YTHDF19975.850ENSFALG00000010463YTHDF19776.079Ficedula_albicollis
ENSORLG00000009739YTHDF19972.630ENSFDAG00000019602YTHDF19772.760Fukomys_damarensis
ENSORLG00000009739YTHDF19978.766ENSFHEG00000023218ythdf19679.444Fundulus_heteroclitus
ENSORLG00000009739YTHDF110092.071ENSFHEG00000002540YTHDF110091.748Fundulus_heteroclitus
ENSORLG00000009739YTHDF18395.312ENSGMOG00000019610ythdf18390.654Gadus_morhua
ENSORLG00000009739YTHDF19975.623ENSGALG00000005745YTHDF110076.000Gallus_gallus
ENSORLG00000009739YTHDF110092.718ENSGAFG00000021100YTHDF110091.086Gambusia_affinis
ENSORLG00000009739YTHDF19975.968ENSGACG00000012014ythdf19975.602Gasterosteus_aculeatus
ENSORLG00000009739YTHDF19986.609ENSGACG00000002613YTHDF19985.691Gasterosteus_aculeatus
ENSORLG00000009739YTHDF19975.398ENSGAGG00000003007YTHDF19775.627Gopherus_agassizii
ENSORLG00000009739YTHDF19973.369ENSGGOG00000008340YTHDF19773.835Gorilla_gorilla
ENSORLG00000009739YTHDF110092.071ENSHBUG00000004875YTHDF110091.909Haplochromis_burtoni
ENSORLG00000009739YTHDF19977.023ENSHBUG00000011284ythdf19976.198Haplochromis_burtoni
ENSORLG00000009739YTHDF19972.920ENSHGLG00000006585YTHDF19773.118Heterocephalus_glaber_female
ENSORLG00000009739YTHDF19972.920ENSHGLG00100004683YTHDF19773.118Heterocephalus_glaber_male
ENSORLG00000009739YTHDF19975.130ENSHCOG00000008866ythdf19975.042Hippocampus_comes
ENSORLG00000009739YTHDF110087.987ENSHCOG00000011303YTHDF110087.290Hippocampus_comes
ENSORLG00000009739YTHDF19982.194ENSIPUG00000000425Ythdf110079.194Ictalurus_punctatus
ENSORLG00000009739YTHDF19973.835ENSSTOG00000023001YTHDF19874.373Ictidomys_tridecemlineatus
ENSORLG00000009739YTHDF19974.107ENSJJAG00000013589Ythdf19973.968Jaculus_jaculus
ENSORLG00000009739YTHDF19680.261ENSKMAG00000005595ythdf19975.923Kryptolebias_marmoratus
ENSORLG00000009739YTHDF110093.008ENSKMAG00000017472YTHDF110092.358Kryptolebias_marmoratus
ENSORLG00000009739YTHDF110090.615ENSLBEG00000012068YTHDF110089.448Labrus_bergylta
ENSORLG00000009739YTHDF19976.661ENSLBEG00000014105ythdf19976.032Labrus_bergylta
ENSORLG00000009739YTHDF19874.101ENSLACG00000014195YTHDF19871.672Latimeria_chalumnae
ENSORLG00000009739YTHDF110078.571ENSLOCG00000005020ythdf110077.273Lepisosteus_oculatus
ENSORLG00000009739YTHDF19974.332ENSLAFG00000008884YTHDF19773.619Loxodonta_africana
ENSORLG00000009739YTHDF19974.464ENSMFAG00000042868YTHDF19774.373Macaca_fascicularis
ENSORLG00000009739YTHDF19974.464ENSMMUG00000009227YTHDF19774.373Macaca_mulatta
ENSORLG00000009739YTHDF19974.464ENSMNEG00000030851YTHDF19774.373Macaca_nemestrina
ENSORLG00000009739YTHDF19974.464ENSMLEG00000009252YTHDF19974.373Mandrillus_leucophaeus
ENSORLG00000009739YTHDF19975.160ENSMAMG00000024255ythdf19974.286Mastacembelus_armatus
ENSORLG00000009739YTHDF110092.233ENSMAMG00000011072YTHDF110092.233Mastacembelus_armatus
ENSORLG00000009739YTHDF110092.071ENSMZEG00005023596YTHDF110091.909Maylandia_zebra
ENSORLG00000009739YTHDF19977.221ENSMZEG00005026397ythdf19977.010Maylandia_zebra
ENSORLG00000009739YTHDF19975.623ENSMGAG00000006139YTHDF19775.986Meleagris_gallopavo
ENSORLG00000009739YTHDF19974.731ENSMAUG00000017660Ythdf19774.327Mesocricetus_auratus
ENSORLG00000009739YTHDF19974.067ENSMICG00000032266YTHDF19773.703Microcebus_murinus
ENSORLG00000009739YTHDF19974.552ENSMOCG00000013573Ythdf19774.686Microtus_ochrogaster
ENSORLG00000009739YTHDF19991.176ENSMMOG00000020467YTHDF19991.176Mola_mola
ENSORLG00000009739YTHDF19675.524ENSMMOG00000017500ythdf19776.214Mola_mola
ENSORLG00000009739YTHDF19375.660ENSMODG00000016842YTHDF110075.095Monodelphis_domestica
ENSORLG00000009739YTHDF110091.220ENSMALG00000022209YTHDF110091.220Monopterus_albus
ENSORLG00000009739YTHDF19678.860ENSMALG00000015672ythdf19975.484Monopterus_albus
ENSORLG00000009739YTHDF19974.731MGP_CAROLIEiJ_G0024790Ythdf19774.147Mus_caroli
ENSORLG00000009739YTHDF19974.731ENSMUSG00000038848Ythdf19774.147Mus_musculus
ENSORLG00000009739YTHDF19974.731MGP_PahariEiJ_G0026237Ythdf19774.147Mus_pahari
ENSORLG00000009739YTHDF19974.731MGP_SPRETEiJ_G0025715Ythdf19774.147Mus_spretus
ENSORLG00000009739YTHDF19371.591ENSMPUG00000008111YTHDF110072.519Mustela_putorius_furo
ENSORLG00000009739YTHDF19974.731ENSMLUG00000002241YTHDF19673.835Myotis_lucifugus
ENSORLG00000009739YTHDF19974.910ENSNGAG00000000334Ythdf19774.327Nannospalax_galili
ENSORLG00000009739YTHDF19975.965ENSNBRG00000008213ythdf19583.544Neolamprologus_brichardi
ENSORLG00000009739YTHDF19989.531ENSNBRG00000015321YTHDF19991.946Neolamprologus_brichardi
ENSORLG00000009739YTHDF19768.315ENSOPRG00000001758-9867.416Ochotona_princeps
ENSORLG00000009739YTHDF19961.032ENSODEG00000000074-9761.032Octodon_degus
ENSORLG00000009739YTHDF19973.345ENSODEG00000004380-9773.477Octodon_degus
ENSORLG00000009739YTHDF19676.801ENSONIG00000016799ythdf19976.821Oreochromis_niloticus
ENSORLG00000009739YTHDF19975.801ENSOANG00000003723YTHDF19775.357Ornithorhynchus_anatinus
ENSORLG00000009739YTHDF19975.806ENSORLG00020000307ythdf19974.092Oryzias_latipes_hni
ENSORLG00000009739YTHDF110098.529ENSORLG00020001332YTHDF110098.529Oryzias_latipes_hni
ENSORLG00000009739YTHDF19975.645ENSORLG00015006302ythdf19973.934Oryzias_latipes_hsok
ENSORLG00000009739YTHDF110099.510ENSORLG00015018321YTHDF110099.510Oryzias_latipes_hsok
ENSORLG00000009739YTHDF19976.252ENSOMEG00000002941YTHDF19976.613Oryzias_melastigma
ENSORLG00000009739YTHDF110097.712ENSOMEG00000011843YTHDF110097.712Oryzias_melastigma
ENSORLG00000009739YTHDF19973.262ENSOGAG00000000480YTHDF19772.939Otolemur_garnettii
ENSORLG00000009739YTHDF19973.369ENSPPAG00000023277YTHDF19873.835Pan_paniscus
ENSORLG00000009739YTHDF19975.404ENSPPRG00000020805YTHDF19775.269Panthera_pardus
ENSORLG00000009739YTHDF19969.730ENSPTIG00000017355YTHDF19777.165Panthera_tigris_altaica
ENSORLG00000009739YTHDF19973.369ENSPTRG00000013730YTHDF19773.835Pan_troglodytes
ENSORLG00000009739YTHDF19974.464ENSPANG00000021472YTHDF19774.373Papio_anubis
ENSORLG00000009739YTHDF19973.477ENSPKIG00000005427ythdf19874.643Paramormyrops_kingsleyae
ENSORLG00000009739YTHDF19875.179ENSPKIG00000005026YTHDF19973.490Paramormyrops_kingsleyae
ENSORLG00000009739YTHDF19875.090ENSPSIG00000005529YTHDF19872.959Pelodiscus_sinensis
ENSORLG00000009739YTHDF19677.168ENSPMGG00000015328ythdf19776.199Periophthalmus_magnuspinnatus
ENSORLG00000009739YTHDF110086.565ENSPMGG00000009101YTHDF19985.050Periophthalmus_magnuspinnatus
ENSORLG00000009739YTHDF19974.731ENSPEMG00000020199Ythdf19974.506Peromyscus_maniculatus_bairdii
ENSORLG00000009739YTHDF19876.044ENSPCIG00000017170YTHDF110075.285Phascolarctos_cinereus
ENSORLG00000009739YTHDF19976.298ENSPFOG00000005405ythdf19976.175Poecilia_formosa
ENSORLG00000009739YTHDF19879.174ENSPLAG00000006653ythdf19580.297Poecilia_latipinna
ENSORLG00000009739YTHDF110092.880ENSPLAG00000006298YTHDF110091.086Poecilia_latipinna
ENSORLG00000009739YTHDF19878.843ENSPMEG00000023753ythdf19976.500Poecilia_mexicana
ENSORLG00000009739YTHDF110092.718ENSPMEG00000020969-10090.924Poecilia_mexicana
ENSORLG00000009739YTHDF19792.180ENSPREG00000017662YTHDF19891.653Poecilia_reticulata
ENSORLG00000009739YTHDF19880.072ENSPREG00000002173ythdf19975.947Poecilia_reticulata
ENSORLG00000009739YTHDF18491.371ENSPPYG00000011226YTHDF19891.371Pongo_abelii
ENSORLG00000009739YTHDF19170.769ENSPCAG00000002452YTHDF19871.094Procavia_capensis
ENSORLG00000009739YTHDF19974.332ENSPCOG00000025969YTHDF19774.061Propithecus_coquereli
ENSORLG00000009739YTHDF19870.128ENSPVAG00000017568YTHDF19967.851Pteropus_vampyrus
ENSORLG00000009739YTHDF110092.071ENSPNYG00000002266YTHDF110091.909Pundamilia_nyererei
ENSORLG00000009739YTHDF19977.023ENSPNYG00000014007ythdf19976.884Pundamilia_nyererei
ENSORLG00000009739YTHDF110079.712ENSPNAG00000012447ythdf110080.968Pygocentrus_nattereri
ENSORLG00000009739YTHDF19974.731ENSRNOG00000027015Ythdf19774.147Rattus_norvegicus
ENSORLG00000009739YTHDF19973.619ENSRBIG00000044959YTHDF19773.656Rhinopithecus_bieti
ENSORLG00000009739YTHDF19973.619ENSRROG00000033014YTHDF19773.656Rhinopithecus_roxellana
ENSORLG00000009739YTHDF110071.858ENSSBOG00000027278YTHDF110071.863Saimiri_boliviensis_boliviensis
ENSORLG00000009739YTHDF19975.986ENSSHAG00000010430YTHDF18775.492Sarcophilus_harrisii
ENSORLG00000009739YTHDF110078.140ENSSFOG00015000284ythdf110077.977Scleropages_formosus
ENSORLG00000009739YTHDF19891.870ENSSMAG00000007635YTHDF110084.356Scophthalmus_maximus
ENSORLG00000009739YTHDF17491.720ENSSMAG00000013715ythdf19186.592Scophthalmus_maximus
ENSORLG00000009739YTHDF19679.558ENSSDUG00000000435ythdf19976.603Seriola_dumerili
ENSORLG00000009739YTHDF110088.959ENSSDUG00000015823YTHDF110088.959Seriola_dumerili
ENSORLG00000009739YTHDF19976.083ENSSLDG00000024948ythdf19977.147Seriola_lalandi_dorsalis
ENSORLG00000009739YTHDF110089.809ENSSLDG00000001054YTHDF110089.968Seriola_lalandi_dorsalis
ENSORLG00000009739YTHDF19376.181ENSSPUG00000015143YTHDF110076.426Sphenodon_punctatus
ENSORLG00000009739YTHDF110092.395ENSSPAG00000003666YTHDF110092.395Stegastes_partitus
ENSORLG00000009739YTHDF19975.118ENSSPAG00000014989ythdf19976.752Stegastes_partitus
ENSORLG00000009739YTHDF19972.172ENSSSCG00000040086YTHDF19772.760Sus_scrofa
ENSORLG00000009739YTHDF19975.445ENSTGUG00000007565YTHDF19876.344Taeniopygia_guttata
ENSORLG00000009739YTHDF19976.950ENSTRUG00000004288ythdf19975.205Takifugu_rubripes
ENSORLG00000009739YTHDF19489.060ENSTRUG00000005049YTHDF110088.372Takifugu_rubripes
ENSORLG00000009739YTHDF19983.662ENSTNIG00000003975YTHDF19781.317Tetraodon_nigroviridis
ENSORLG00000009739YTHDF19977.076ENSTNIG00000012490ythdf19974.411Tetraodon_nigroviridis
ENSORLG00000009739YTHDF19873.224ENSTTRG00000001804YTHDF19969.347Tursiops_truncatus
ENSORLG00000009739YTHDF110073.975ENSUAMG00000011021YTHDF110074.237Ursus_americanus
ENSORLG00000009739YTHDF19374.427ENSUMAG00000022290YTHDF110072.222Ursus_maritimus
ENSORLG00000009739YTHDF19374.187ENSVVUG00000015275YTHDF19974.379Vulpes_vulpes
ENSORLG00000009739YTHDF19875.666ENSXETG00000027086ythdf19873.122Xenopus_tropicalis
ENSORLG00000009739YTHDF19879.529ENSXCOG00000002490ythdf19279.963Xiphophorus_couchianus
ENSORLG00000009739YTHDF19891.556ENSXCOG00000008115YTHDF19989.884Xiphophorus_couchianus
ENSORLG00000009739YTHDF19978.966ENSXMAG00000008525ythdf19976.013Xiphophorus_maculatus
ENSORLG00000009739YTHDF110092.395ENSXMAG00000015644YTHDF110091.741Xiphophorus_maculatus

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