EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000009899 (Gene tree)
Gene ID: 101165305
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 19131 bases
Position: chr7:16202191-16221321
Accession: 101165305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000012417	KH_1	PF00013.29	6e-40	1	2
ENSORLP00000012417	KH_1	PF00013.29	6e-40	2	2
ENSORLP00000012417	KH_2	PF07650.17	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012418	-	1332	XM_011477233	ENSORLP00000012417	443 (aa)	XP_011475535	H2M1Y2

Gene Model

Click here to download ENSORLG00000009899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000009899	-	74	58.308	ENSORLG00000005176	PCBP2	96	58.359
ENSORLG00000009899	-	51	50.000	ENSORLG00000005161	hnrnpk	54	50.000
ENSORLG00000009899	-	73	58.663	ENSORLG00000022739	-	94	58.663
ENSORLG00000009899	-	86	55.325	ENSORLG00000012872	pcbp2	98	56.395
ENSORLG00000009899	-	99	52.620	ENSORLG00000014385	-	99	52.620
ENSORLG00000009899	-	100	68.632	ENSORLG00000003061	pcbp4	96	69.263
ENSORLG00000009899	-	72	59.021	ENSORLG00000000059	pcbp3	97	59.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009899	-	98	53.556	ENSG00000090097	PCBP4	97	66.258	Homo_sapiens
ENSORLG00000009899	-	100	91.946	ENSAPOG00000009897	-	98	91.946	Acanthochromis_polyacanthus
ENSORLG00000009899	-	53	85.256	ENSAPOG00000018462	-	69	85.256	Acanthochromis_polyacanthus
ENSORLG00000009899	-	98	54.338	ENSAMEG00000009211	PCBP4	97	55.227	Ailuropoda_melanoleuca
ENSORLG00000009899	-	91	95.285	ENSACIG00000020434	-	97	95.285	Amphilophus_citrinellus
ENSORLG00000009899	-	91	73.934	ENSACIG00000015264	pcbp4	89	75.829	Amphilophus_citrinellus
ENSORLG00000009899	-	100	92.099	ENSAOCG00000021366	-	100	92.099	Amphiprion_ocellaris
ENSORLG00000009899	-	87	63.613	ENSAOCG00000006924	-	100	64.631	Amphiprion_ocellaris
ENSORLG00000009899	-	91	75.485	ENSAPEG00000023157	pcbp4	99	75.971	Amphiprion_percula
ENSORLG00000009899	-	92	67.633	ENSAPEG00000009555	-	78	87.745	Amphiprion_percula
ENSORLG00000009899	-	100	90.745	ENSATEG00000006511	-	100	90.745	Anabas_testudineus
ENSORLG00000009899	-	91	69.249	ENSATEG00000008529	pcbp4	94	68.735	Anabas_testudineus
ENSORLG00000009899	-	98	59.184	ENSACAG00000011701	PCBP4	97	58.730	Anolis_carolinensis
ENSORLG00000009899	-	98	53.587	ENSANAG00000023072	PCBP4	99	53.982	Aotus_nancymaae
ENSORLG00000009899	-	100	69.917	ENSACLG00000013348	pcbp4	96	70.124	Astatotilapia_calliptera
ENSORLG00000009899	-	100	91.946	ENSACLG00000025246	-	100	90.745	Astatotilapia_calliptera
ENSORLG00000009899	-	100	78.681	ENSAMXG00000033125	pcbp4	98	78.901	Astyanax_mexicanus
ENSORLG00000009899	-	98	54.795	ENSBTAG00000018622	PCBP4	97	55.455	Bos_taurus
ENSORLG00000009899	-	98	53.333	ENSCJAG00000005783	PCBP4	99	54.204	Callithrix_jacchus
ENSORLG00000009899	-	98	54.338	ENSCAFG00000010019	PCBP4	97	55.227	Canis_familiaris
ENSORLG00000009899	-	98	54.338	ENSCAFG00020022361	PCBP4	97	55.227	Canis_lupus_dingo
ENSORLG00000009899	-	98	54.566	ENSCHIG00000012918	PCBP4	97	55.227	Capra_hircus
ENSORLG00000009899	-	98	54.462	ENSTSYG00000008765	PCBP4	97	55.079	Carlito_syrichta
ENSORLG00000009899	-	98	53.968	ENSCAPG00000005895	PCBP4	97	54.628	Cavia_aperea
ENSORLG00000009899	-	98	54.195	ENSCPOG00000014617	PCBP4	97	54.853	Cavia_porcellus
ENSORLG00000009899	-	98	53.333	ENSCCAG00000033268	PCBP4	99	54.204	Cebus_capucinus
ENSORLG00000009899	-	98	53.778	ENSCATG00000032034	PCBP4	99	54.222	Cercocebus_atys
ENSORLG00000009899	-	98	54.442	ENSCLAG00000008356	PCBP4	97	54.875	Chinchilla_lanigera
ENSORLG00000009899	-	98	53.333	ENSCSAG00000013913	PCBP4	99	54.204	Chlorocebus_sabaeus
ENSORLG00000009899	-	98	58.957	ENSCPBG00000016554	PCBP4	95	58.957	Chrysemys_picta_bellii
ENSORLG00000009899	-	98	53.571	ENSCANG00000038865	PCBP4	99	54.222	Colobus_angolensis_palliatus
ENSORLG00000009899	-	98	54.233	ENSCGRG00001014953	Pcbp4	97	55.079	Cricetulus_griseus_chok1gshd
ENSORLG00000009899	-	98	54.233	ENSCGRG00000008617	Pcbp4	97	55.079	Cricetulus_griseus_crigri
ENSORLG00000009899	-	100	84.719	ENSCSEG00000021041	PCBP4	100	84.719	Cynoglossus_semilaevis
ENSORLG00000009899	-	100	66.318	ENSCSEG00000014487	pcbp4	95	67.573	Cynoglossus_semilaevis
ENSORLG00000009899	-	92	67.857	ENSCVAG00000003674	pcbp4	95	68.571	Cyprinodon_variegatus
ENSORLG00000009899	-	100	89.842	ENSCVAG00000013090	-	98	89.842	Cyprinodon_variegatus
ENSORLG00000009899	-	100	77.313	ENSDARG00000024276	pcbp4	100	77.201	Danio_rerio
ENSORLG00000009899	-	94	59.722	ENSDNOG00000033951	PCBP4	87	54.217	Dasypus_novemcinctus
ENSORLG00000009899	-	98	53.968	ENSDORG00000000573	Pcbp4	97	54.628	Dipodomys_ordii
ENSORLG00000009899	-	65	55.449	ENSETEG00000001778	PCBP4	96	55.449	Echinops_telfairi
ENSORLG00000009899	-	98	54.110	ENSEASG00005012889	PCBP4	97	55.000	Equus_asinus_asinus
ENSORLG00000009899	-	98	54.110	ENSECAG00000024218	PCBP4	97	55.000	Equus_caballus
ENSORLG00000009899	-	100	82.781	ENSELUG00000001870	-	98	81.678	Esox_lucius
ENSORLG00000009899	-	100	71.949	ENSELUG00000018204	pcbp4	98	72.473	Esox_lucius
ENSORLG00000009899	-	98	54.338	ENSFCAG00000009148	PCBP4	97	55.227	Felis_catus
ENSORLG00000009899	-	96	54.965	ENSFALG00000008831	PCBP4	95	55.220	Ficedula_albicollis
ENSORLG00000009899	-	98	53.864	ENSFDAG00000012692	PCBP4	97	54.525	Fukomys_damarensis
ENSORLG00000009899	-	92	70.343	ENSFHEG00000002769	-	98	70.343	Fundulus_heteroclitus
ENSORLG00000009899	-	100	83.073	ENSGMOG00000017799	-	100	83.073	Gadus_morhua
ENSORLG00000009899	-	98	54.566	ENSGALG00000027695	PCBP4	97	54.795	Gallus_gallus
ENSORLG00000009899	-	52	88.079	ENSGAFG00000018301	pcbp4	63	88.079	Gambusia_affinis
ENSORLG00000009899	-	82	88.043	ENSGAFG00000021090	-	76	90.196	Gambusia_affinis
ENSORLG00000009899	-	100	85.938	ENSGACG00000002664	-	100	86.607	Gasterosteus_aculeatus
ENSORLG00000009899	-	98	59.184	ENSGAGG00000022116	PCBP4	95	59.184	Gopherus_agassizii
ENSORLG00000009899	-	98	53.111	ENSGGOG00000012474	PCBP4	99	53.982	Gorilla_gorilla
ENSORLG00000009899	-	100	91.723	ENSHBUG00000005329	-	100	90.519	Haplochromis_burtoni
ENSORLG00000009899	-	100	69.710	ENSHBUG00000009472	pcbp4	96	69.917	Haplochromis_burtoni
ENSORLG00000009899	-	98	54.422	ENSHGLG00000012018	PCBP4	97	55.079	Heterocephalus_glaber_female
ENSORLG00000009899	-	98	54.054	ENSHGLG00100008748	PCBP4	97	54.484	Heterocephalus_glaber_male
ENSORLG00000009899	-	100	83.929	ENSHCOG00000010838	-	98	86.420	Hippocampus_comes
ENSORLG00000009899	-	100	79.065	ENSIPUG00000008212	pcbp4	98	79.065	Ictalurus_punctatus
ENSORLG00000009899	-	98	54.233	ENSSTOG00000002573	PCBP4	97	54.897	Ictidomys_tridecemlineatus
ENSORLG00000009899	-	98	54.195	ENSJJAG00000016235	Pcbp4	97	55.079	Jaculus_jaculus
ENSORLG00000009899	-	100	72.281	ENSKMAG00000014252	pcbp4	96	72.495	Kryptolebias_marmoratus
ENSORLG00000009899	-	100	90.828	ENSKMAG00000017554	-	98	90.828	Kryptolebias_marmoratus
ENSORLG00000009899	-	100	90.519	ENSLBEG00000011345	-	100	90.519	Labrus_bergylta
ENSORLG00000009899	-	99	63.596	ENSLACG00000015899	PCBP4	94	72.152	Latimeria_chalumnae
ENSORLG00000009899	-	100	76.615	ENSLOCG00000013402	pcbp4	98	77.333	Lepisosteus_oculatus
ENSORLG00000009899	-	91	54.369	ENSLAFG00000010732	PCBP4	99	54.831	Loxodonta_africana
ENSORLG00000009899	-	98	53.571	ENSMFAG00000001431	PCBP4	99	54.222	Macaca_fascicularis
ENSORLG00000009899	-	98	53.571	ENSMMUG00000022205	PCBP4	99	54.222	Macaca_mulatta
ENSORLG00000009899	-	98	53.571	ENSMNEG00000028553	PCBP4	99	54.222	Macaca_nemestrina
ENSORLG00000009899	-	98	53.571	ENSMLEG00000027083	PCBP4	99	54.222	Mandrillus_leucophaeus
ENSORLG00000009899	-	100	92.099	ENSMAMG00000011364	-	100	92.099	Mastacembelus_armatus
ENSORLG00000009899	-	100	70.650	ENSMAMG00000010163	pcbp4	95	71.069	Mastacembelus_armatus
ENSORLG00000009899	-	100	69.917	ENSMZEG00005008852	pcbp4	94	74.408	Maylandia_zebra
ENSORLG00000009899	-	100	92.099	ENSMZEG00005023631	-	100	92.099	Maylandia_zebra
ENSORLG00000009899	-	60	56.383	ENSMGAG00000003895	-	86	55.319	Meleagris_gallopavo
ENSORLG00000009899	-	59	66.129	ENSMGAG00000005091	-	85	66.129	Meleagris_gallopavo
ENSORLG00000009899	-	98	54.195	ENSMAUG00000021064	Pcbp4	97	55.079	Mesocricetus_auratus
ENSORLG00000009899	-	98	54.422	ENSMICG00000002686	PCBP4	97	55.079	Microcebus_murinus
ENSORLG00000009899	-	98	53.620	ENSMOCG00000013557	Pcbp4	97	54.505	Microtus_ochrogaster
ENSORLG00000009899	-	100	89.165	ENSMMOG00000020533	-	100	89.165	Mola_mola
ENSORLG00000009899	-	74	61.111	ENSMMOG00000017756	pcbp4	97	61.111	Mola_mola
ENSORLG00000009899	-	98	54.566	ENSMODG00000011790	PCBP4	82	54.338	Monodelphis_domestica
ENSORLG00000009899	-	91	75.121	ENSMALG00000020318	pcbp4	87	75.121	Monopterus_albus
ENSORLG00000009899	-	89	93.924	ENSMALG00000022117	-	100	93.548	Monopterus_albus
ENSORLG00000009899	-	98	54.195	MGP_CAROLIEiJ_G0032623	Pcbp4	93	67.391	Mus_caroli
ENSORLG00000009899	-	98	54.195	ENSMUSG00000023495	Pcbp4	91	70.370	Mus_musculus
ENSORLG00000009899	-	98	54.195	MGP_PahariEiJ_G0015491	Pcbp4	93	67.391	Mus_pahari
ENSORLG00000009899	-	98	54.195	MGP_SPRETEiJ_G0033768	-	93	67.391	Mus_spretus
ENSORLG00000009899	-	98	54.338	ENSMPUG00000011766	PCBP4	97	55.227	Mustela_putorius_furo
ENSORLG00000009899	-	98	54.299	ENSNGAG00000013148	Pcbp4	99	53.704	Nannospalax_galili
ENSORLG00000009899	-	100	92.325	ENSNBRG00000015885	-	100	92.325	Neolamprologus_brichardi
ENSORLG00000009899	-	97	62.806	ENSNBRG00000007475	pcbp4	99	62.806	Neolamprologus_brichardi
ENSORLG00000009899	-	98	53.571	ENSNLEG00000007064	PCBP4	99	54.222	Nomascus_leucogenys
ENSORLG00000009899	-	92	48.352	ENSMEUG00000006917	PCBP4	97	48.124	Notamacropus_eugenii
ENSORLG00000009899	-	91	50.673	ENSOPRG00000008763	PCBP4	97	51.116	Ochotona_princeps
ENSORLG00000009899	-	98	53.968	ENSODEG00000018230	PCBP4	97	54.853	Octodon_degus
ENSORLG00000009899	-	98	54.358	ENSOANG00000014110	PCBP4	94	54.566	Ornithorhynchus_anatinus
ENSORLG00000009899	-	98	54.195	ENSOCUG00000025336	PCBP4	97	55.079	Oryctolagus_cuniculus
ENSORLG00000009899	-	100	94.831	ENSORLG00020001183	-	100	94.831	Oryzias_latipes_hni
ENSORLG00000009899	-	100	95.078	ENSORLG00015017819	-	98	95.078	Oryzias_latipes_hsok
ENSORLG00000009899	-	100	67.641	ENSORLG00015019262	pcbp4	96	68.058	Oryzias_latipes_hsok
ENSORLG00000009899	-	100	94.183	ENSOMEG00000011545	-	98	94.183	Oryzias_melastigma
ENSORLG00000009899	-	100	66.525	ENSOMEG00000003516	-	100	65.533	Oryzias_melastigma
ENSORLG00000009899	-	98	53.968	ENSOGAG00000032384	PCBP4	97	54.853	Otolemur_garnettii
ENSORLG00000009899	-	91	55.309	ENSOARG00000006603	PCBP4	98	56.020	Ovis_aries
ENSORLG00000009899	-	98	53.244	ENSPPAG00000038764	PCBP4	99	54.566	Pan_paniscus
ENSORLG00000009899	-	98	54.338	ENSPPRG00000006165	PCBP4	97	55.227	Panthera_pardus
ENSORLG00000009899	-	98	54.338	ENSPTIG00000005401	PCBP4	93	55.227	Panthera_tigris_altaica
ENSORLG00000009899	-	98	53.556	ENSPTRG00000014983	PCBP4	99	53.982	Pan_troglodytes
ENSORLG00000009899	-	98	53.571	ENSPANG00000026222	PCBP4	99	54.222	Papio_anubis
ENSORLG00000009899	-	100	78.795	ENSPKIG00000010244	pcbp4	100	79.215	Paramormyrops_kingsleyae
ENSORLG00000009899	-	100	70.419	ENSPKIG00000005487	-	98	70.419	Paramormyrops_kingsleyae
ENSORLG00000009899	-	81	56.354	ENSPSIG00000011286	PCBP4	96	55.488	Pelodiscus_sinensis
ENSORLG00000009899	-	91	72.794	ENSPMGG00000000063	pcbp4	96	72.794	Periophthalmus_magnuspinnatus
ENSORLG00000009899	-	100	83.333	ENSPMGG00000022732	-	100	83.559	Periophthalmus_magnuspinnatus
ENSORLG00000009899	-	98	54.318	ENSPEMG00000009276	Pcbp4	97	55.079	Peromyscus_maniculatus_bairdii
ENSORLG00000009899	-	98	55.251	ENSPCIG00000018151	PCBP4	93	55.023	Phascolarctos_cinereus
ENSORLG00000009899	-	98	66.295	ENSPFOG00000014474	pcbp4	96	80.632	Poecilia_formosa
ENSORLG00000009899	-	100	90.380	ENSPFOG00000002989	-	98	90.380	Poecilia_formosa
ENSORLG00000009899	-	91	64.762	ENSPLAG00000011438	-	97	64.762	Poecilia_latipinna
ENSORLG00000009899	-	83	68.490	ENSPLAG00000023316	pcbp4	89	69.792	Poecilia_latipinna
ENSORLG00000009899	-	62	60.133	ENSPMEG00000012990	pcbp4	100	61.794	Poecilia_mexicana
ENSORLG00000009899	-	52	91.071	ENSPREG00000021498	-	71	91.071	Poecilia_reticulata
ENSORLG00000009899	-	100	86.230	ENSPREG00000017370	-	100	86.230	Poecilia_reticulata
ENSORLG00000009899	-	98	53.333	ENSPPYG00000013822	PCBP4	99	54.204	Pongo_abelii
ENSORLG00000009899	-	93	50.893	ENSPCAG00000009515	PCBP4	99	51.116	Procavia_capensis
ENSORLG00000009899	-	98	54.195	ENSPCOG00000027535	PCBP4	97	55.079	Propithecus_coquereli
ENSORLG00000009899	-	92	48.077	ENSPVAG00000012474	PCBP4	99	47.872	Pteropus_vampyrus
ENSORLG00000009899	-	91	73.995	ENSPNYG00000019234	pcbp4	95	74.232	Pundamilia_nyererei
ENSORLG00000009899	-	100	91.874	ENSPNYG00000003098	-	100	91.874	Pundamilia_nyererei
ENSORLG00000009899	-	100	78.855	ENSPNAG00000025434	pcbp4	98	79.295	Pygocentrus_nattereri
ENSORLG00000009899	-	98	54.195	ENSRNOG00000012406	Pcbp4	97	55.079	Rattus_norvegicus
ENSORLG00000009899	-	98	53.571	ENSRBIG00000043793	PCBP4	99	54.222	Rhinopithecus_bieti
ENSORLG00000009899	-	98	53.571	ENSRROG00000034589	PCBP4	99	54.222	Rhinopithecus_roxellana
ENSORLG00000009899	-	98	53.761	ENSSBOG00000027029	PCBP4	99	54.204	Saimiri_boliviensis_boliviensis
ENSORLG00000009899	-	73	52.672	ENSSHAG00000007362	PCBP4	100	52.672	Sarcophilus_harrisii
ENSORLG00000009899	-	73	80.583	ENSSFOG00015008221	pcbp4	60	80.583	Scleropages_formosus
ENSORLG00000009899	-	100	71.269	ENSSFOG00015012075	PCBP4	98	71.269	Scleropages_formosus
ENSORLG00000009899	-	100	71.579	ENSSMAG00000005827	pcbp4	94	72.421	Scophthalmus_maximus
ENSORLG00000009899	-	100	89.640	ENSSMAG00000009392	-	100	89.640	Scophthalmus_maximus
ENSORLG00000009899	-	100	92.325	ENSSDUG00000015540	-	100	92.325	Seriola_dumerili
ENSORLG00000009899	-	94	74.413	ENSSDUG00000017719	pcbp4	99	74.941	Seriola_dumerili
ENSORLG00000009899	-	100	92.325	ENSSLDG00000007851	-	100	92.325	Seriola_lalandi_dorsalis
ENSORLG00000009899	-	53	84.713	ENSSLDG00000024847	-	69	84.713	Seriola_lalandi_dorsalis
ENSORLG00000009899	-	98	54.713	ENSSPUG00000000194	PCBP4	97	54.943	Sphenodon_punctatus
ENSORLG00000009899	-	83	63.472	ENSSPAG00000019058	-	92	63.472	Stegastes_partitus
ENSORLG00000009899	-	100	91.499	ENSSPAG00000003033	-	98	91.499	Stegastes_partitus
ENSORLG00000009899	-	98	54.338	ENSSSCG00000028446	PCBP4	97	55.227	Sus_scrofa
ENSORLG00000009899	-	72	53.086	ENSTGUG00000006393	PCBP4	96	53.086	Taeniopygia_guttata
ENSORLG00000009899	-	100	88.036	ENSTRUG00000007426	-	100	88.036	Takifugu_rubripes
ENSORLG00000009899	-	100	81.208	ENSTNIG00000017887	-	99	81.208	Tetraodon_nigroviridis
ENSORLG00000009899	-	82	38.084	ENSTBEG00000015770	PCBP4	100	38.875	Tupaia_belangeri
ENSORLG00000009899	-	72	53.968	ENSTTRG00000001443	PCBP4	84	54.450	Tursiops_truncatus
ENSORLG00000009899	-	98	50.000	ENSUAMG00000020871	PCBP4	100	54.255	Ursus_americanus
ENSORLG00000009899	-	88	55.419	ENSUMAG00000021609	PCBP4	93	54.785	Ursus_maritimus
ENSORLG00000009899	-	98	54.338	ENSVVUG00000026857	PCBP4	97	55.227	Vulpes_vulpes
ENSORLG00000009899	-	52	87.333	ENSXCOG00000017325	pcbp4	63	87.333	Xiphophorus_couchianus
ENSORLG00000009899	-	84	83.602	ENSXCOG00000000111	-	100	83.602	Xiphophorus_couchianus
ENSORLG00000009899	-	100	89.933	ENSXMAG00000024530	-	98	89.933	Xiphophorus_maculatus
ENSORLG00000009899	-	87	66.585	ENSXMAG00000022188	-	90	67.813	Xiphophorus_maculatus
ENSORLG00000009899	-	80	77.778	ENSXMAG00000015709	pcbp4	75	77.778	Xiphophorus_maculatus