EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000009919 (Gene tree)
Gene ID
101155103
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein 39
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
8990 bases
Position
chr5:19275426-19284415
Accession
101155103
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000012444RRM_1PF00076.221.9e-3912
ENSORLP00000012444RRM_1PF00076.221.9e-3922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000012445-1766XM_011475195ENSORLP00000012444503 (aa)XP_011473497H2M208
Gene Model
Click here to download ENSORLG00000009919's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009919's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000009919-6535.577ENSORLG00000028655-8443.902
ENSORLG00000009919-7339.286ENSORLG00000004217ELAVL29440.449
ENSORLG00000009919-9971.820ENSORLG00000010370rbm39b10073.964
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000009919-9975.342ENSG00000131051RBM398891.244Homo_sapiens
ENSORLG00000009919-5583.755ENSAPOG00000000306rbm39b10083.032Acanthochromis_polyacanthus
ENSORLG00000009919-10088.690ENSAPOG00000019452-10082.341Acanthochromis_polyacanthus
ENSORLG00000009919-9970.677ENSAMEG00000009940RBM397781.022Ailuropoda_melanoleuca
ENSORLG00000009919-5577.061ENSACIG00000021116rbm39b10077.778Amphilophus_citrinellus
ENSORLG00000009919-8389.286ENSACIG00000022910-8389.688Amphilophus_citrinellus
ENSORLG00000009919-9974.213ENSAOCG00000006206rbm39b10075.050Amphiprion_ocellaris
ENSORLG00000009919-10084.706ENSAOCG00000007223-10080.000Amphiprion_ocellaris
ENSORLG00000009919-9974.409ENSAPEG00000011141rbm39b10075.050Amphiprion_percula
ENSORLG00000009919-10085.545ENSAPEG00000021927-10080.792Amphiprion_percula
ENSORLG00000009919-7489.812ENSATEG00000009461-10089.812Anabas_testudineus
ENSORLG00000009919-9974.213ENSATEG00000007482rbm39b10075.740Anabas_testudineus
ENSORLG00000009919-9972.881ENSAPLG00000003477RBM397780.145Anas_platyrhynchos
ENSORLG00000009919-9971.805ENSACAG00000006436RBM397781.081Anolis_carolinensis
ENSORLG00000009919-9958.135ENSANAG00000038387-7964.573Aotus_nancymaae
ENSORLG00000009919-9975.342ENSANAG00000024610RBM3910074.314Aotus_nancymaae
ENSORLG00000009919-10085.602ENSACLG00000014339-10086.193Astatotilapia_calliptera
ENSORLG00000009919-9973.705ENSACLG00000024774rbm39b10074.059Astatotilapia_calliptera
ENSORLG00000009919-10073.221ENSAMXG00000013781rbm39a8284.521Astyanax_mexicanus
ENSORLG00000009919-9975.000ENSAMXG00000012946rbm39b10071.513Astyanax_mexicanus
ENSORLG00000009919-9975.342ENSBTAG00000003949RBM3910074.314Bos_taurus
ENSORLG00000009919-9975.342ENSCJAG00000017535RBM3910082.480Callithrix_jacchus
ENSORLG00000009919-9970.677ENSCAFG00000008327RBM397781.022Canis_familiaris
ENSORLG00000009919-9975.342ENSCAFG00020005676RBM3910074.314Canis_lupus_dingo
ENSORLG00000009919-9969.625ENSCHIG00000014731-10065.415Capra_hircus
ENSORLG00000009919-7981.141ENSCHIG00000024884RBM398081.022Capra_hircus
ENSORLG00000009919-9975.342ENSTSYG00000005605RBM3910082.480Carlito_syrichta
ENSORLG00000009919-9967.659ENSCAPG00000012702-10063.250Cavia_aperea
ENSORLG00000009919-7080.226ENSCPOG00000039333-7572.019Cavia_porcellus
ENSORLG00000009919-8175.245ENSCPOG00000014625-9375.000Cavia_porcellus
ENSORLG00000009919-9975.342ENSCCAG00000031689-10082.480Cebus_capucinus
ENSORLG00000009919-9961.373ENSCCAG00000035313-9955.556Cebus_capucinus
ENSORLG00000009919-9957.791ENSCATG00000030221-10058.268Cercocebus_atys
ENSORLG00000009919-7080.791ENSCATG00000032917-9980.000Cercocebus_atys
ENSORLG00000009919-9970.677ENSCLAG00000016940RBM397781.022Chinchilla_lanigera
ENSORLG00000009919-7973.566ENSCSAG00000010271RBM398273.350Chlorocebus_sabaeus
ENSORLG00000009919-9973.333ENSCPBG00000011600RBM397781.327Chrysemys_picta_bellii
ENSORLG00000009919-9975.342ENSCANG00000031033-10082.480Colobus_angolensis_palliatus
ENSORLG00000009919-9155.052ENSCANG00000022597-10055.052Colobus_angolensis_palliatus
ENSORLG00000009919-9970.677ENSCGRG00001013983Rbm397781.022Cricetulus_griseus_chok1gshd
ENSORLG00000009919-9971.023ENSCGRG00000015067Rbm397781.327Cricetulus_griseus_crigri
ENSORLG00000009919-9975.644ENSCSEG00000021307rbm39b10070.495Cynoglossus_semilaevis
ENSORLG00000009919-10081.961ENSCSEG00000020394-10078.627Cynoglossus_semilaevis
ENSORLG00000009919-8081.188ENSCVAG00000015985rbm39b10073.176Cyprinodon_variegatus
ENSORLG00000009919-7487.668ENSCVAG00000014408-10087.668Cyprinodon_variegatus
ENSORLG00000009919-9968.266ENSDARG00000041853rbm39b7479.602Danio_rerio
ENSORLG00000009919-7985.714ENSDARG00000011613rbm39a8084.634Danio_rerio
ENSORLG00000009919-9970.677ENSDNOG00000025219RBM397781.022Dasypus_novemcinctus
ENSORLG00000009919-9970.677ENSDORG00000000233Rbm397981.022Dipodomys_ordii
ENSORLG00000009919-6680.672ENSETEG00000016295RBM397766.423Echinops_telfairi
ENSORLG00000009919-8073.449ENSEBUG00000001337rbm39a7873.449Eptatretus_burgeri
ENSORLG00000009919-8974.839ENSEASG00005003936RBM398580.825Equus_asinus_asinus
ENSORLG00000009919-9970.677ENSECAG00000013423RBM397781.022Equus_caballus
ENSORLG00000009919-9966.353ENSEEUG00000004390RBM397775.669Erinaceus_europaeus
ENSORLG00000009919-9771.196ENSELUG00000020296rbm39a9872.101Esox_lucius
ENSORLG00000009919-9971.751ENSELUG00000001796rbm39b7682.439Esox_lucius
ENSORLG00000009919-9975.342ENSFCAG00000003233RBM3910074.314Felis_catus
ENSORLG00000009919-7981.566ENSFALG00000012498RBM397781.081Ficedula_albicollis
ENSORLG00000009919-7265.014ENSFDAG00000007943-10065.014Fukomys_damarensis
ENSORLG00000009919-7360.870ENSFDAG00000021507-9960.326Fukomys_damarensis
ENSORLG00000009919-9972.744ENSFDAG00000021510-7880.872Fukomys_damarensis
ENSORLG00000009919-9953.890ENSFDAG00000015069-8060.333Fukomys_damarensis
ENSORLG00000009919-9970.611ENSFHEG00000003421rbm39b10072.978Fundulus_heteroclitus
ENSORLG00000009919-6081.250ENSGMOG00000016584rbm39b6181.250Gadus_morhua
ENSORLG00000009919-8172.365ENSGMOG00000017567-8883.333Gadus_morhua
ENSORLG00000009919-9976.389ENSGALG00000001550RBM3910074.901Gallus_gallus
ENSORLG00000009919-7480.108ENSGAFG00000019545-10080.108Gambusia_affinis
ENSORLG00000009919-9971.230ENSGAFG00000021058rbm39b10073.176Gambusia_affinis
ENSORLG00000009919-10074.234ENSGACG00000003376-10069.189Gasterosteus_aculeatus
ENSORLG00000009919-9969.287ENSGACG00000002797rbm39b10082.749Gasterosteus_aculeatus
ENSORLG00000009919-9973.333ENSGAGG00000015140RBM397781.327Gopherus_agassizii
ENSORLG00000009919-8968.363ENSGGOG00000036253-9473.039Gorilla_gorilla
ENSORLG00000009919-9975.342ENSGGOG00000003950RBM3910082.480Gorilla_gorilla
ENSORLG00000009919-10082.970ENSHBUG00000009017-10086.535Haplochromis_burtoni
ENSORLG00000009919-9973.705ENSHBUG00000006158rbm39b10074.059Haplochromis_burtoni
ENSORLG00000009919-9061.845ENSHGLG00000001772-7666.914Heterocephalus_glaber_female
ENSORLG00000009919-9972.917ENSHGLG00000017871RBM397781.081Heterocephalus_glaber_female
ENSORLG00000009919-9954.134ENSHGLG00000006013-8655.841Heterocephalus_glaber_female
ENSORLG00000009919-9754.418ENSHGLG00000010196-7557.868Heterocephalus_glaber_female
ENSORLG00000009919-6863.930ENSHGLG00100008245-9963.636Heterocephalus_glaber_male
ENSORLG00000009919-9972.917ENSHGLG00100019327-7781.327Heterocephalus_glaber_male
ENSORLG00000009919-8054.501ENSHGLG00100000829-9053.699Heterocephalus_glaber_male
ENSORLG00000009919-9954.455ENSHGLG00100011532-8456.235Heterocephalus_glaber_male
ENSORLG00000009919-10079.537ENSHCOG00000014668-10080.116Hippocampus_comes
ENSORLG00000009919-9974.303ENSHCOG00000009222rbm39b10071.287Hippocampus_comes
ENSORLG00000009919-9972.904ENSIPUG00000024623rbm3910072.994Ictalurus_punctatus
ENSORLG00000009919-9977.470ENSIPUG00000012202rbm39b10077.579Ictalurus_punctatus
ENSORLG00000009919-7968.396ENSSTOG00000030698RBM396389.734Ictidomys_tridecemlineatus
ENSORLG00000009919-9960.359ENSJJAG00000023249-10058.964Jaculus_jaculus
ENSORLG00000009919-7476.011ENSJJAG00000016745-10075.472Jaculus_jaculus
ENSORLG00000009919-5573.852ENSKMAG00000014566-9973.852Kryptolebias_marmoratus
ENSORLG00000009919-9975.100ENSKMAG00000016811rbm39b10070.297Kryptolebias_marmoratus
ENSORLG00000009919-7382.880ENSLBEG00000009909rbm39b10082.210Labrus_bergylta
ENSORLG00000009919-7483.065ENSLBEG00000008018-10084.140Labrus_bergylta
ENSORLG00000009919-10079.702ENSLBEG00000018799-10074.302Labrus_bergylta
ENSORLG00000009919-9969.737ENSLACG00000018811RBM397680.098Latimeria_chalumnae
ENSORLG00000009919-9965.896ENSLACG00000016576-9874.114Latimeria_chalumnae
ENSORLG00000009919-7986.111ENSLOCG00000006562rbm39a7786.241Lepisosteus_oculatus
ENSORLG00000009919-9970.677ENSLAFG00000010346RBM397781.127Loxodonta_africana
ENSORLG00000009919-9975.342ENSMMUG00000031284RBM3910074.314Macaca_mulatta
ENSORLG00000009919-9975.342ENSMNEG00000040217RBM3910082.480Macaca_nemestrina
ENSORLG00000009919-7482.480ENSMLEG00000031533-10082.480Mandrillus_leucophaeus
ENSORLG00000009919-9958.185ENSMLEG00000030882-10058.071Mandrillus_leucophaeus
ENSORLG00000009919-10079.804ENSMAMG00000009683-10079.804Mastacembelus_armatus
ENSORLG00000009919-8181.818ENSMAMG00000011883rbm39b10073.281Mastacembelus_armatus
ENSORLG00000009919-10085.573ENSMZEG00005012065-10086.166Maylandia_zebra
ENSORLG00000009919-9973.465ENSMZEG00005023724rbm39b8674.059Maylandia_zebra
ENSORLG00000009919-9971.267ENSMGAG00000001509RBM397780.779Meleagris_gallopavo
ENSORLG00000009919-7980.893ENSMAUG00000014642Rbm398181.022Mesocricetus_auratus
ENSORLG00000009919-9961.089ENSMICG00000035049-10068.785Microcebus_murinus
ENSORLG00000009919-9975.342ENSMICG00000001668RBM3910082.480Microcebus_murinus
ENSORLG00000009919-9968.233ENSMOCG00000017326Rbm397777.859Microtus_ochrogaster
ENSORLG00000009919-9971.514ENSMMOG00000020616rbm39b10070.495Mola_mola
ENSORLG00000009919-7487.936ENSMMOG00000017823-10087.936Mola_mola
ENSORLG00000009919-9972.744ENSMODG00000001557RBM397780.435Monodelphis_domestica
ENSORLG00000009919-10078.304ENSMALG00000020628-8583.971Monopterus_albus
ENSORLG00000009919-9974.506ENSMALG00000021595rbm39b10074.901Monopterus_albus
ENSORLG00000009919-9972.932MGP_CAROLIEiJ_G0024554Rbm399975.375Mus_caroli
ENSORLG00000009919-9972.932ENSMUSG00000027620Rbm399975.375Mus_musculus
ENSORLG00000009919-9970.833MGP_PahariEiJ_G0025999Rbm399574.922Mus_pahari
ENSORLG00000009919-9972.932MGP_SPRETEiJ_G0025476Rbm399975.375Mus_spretus
ENSORLG00000009919-9970.677ENSMPUG00000017786RBM397781.022Mustela_putorius_furo
ENSORLG00000009919-9970.888ENSMLUG00000003000RBM397781.127Myotis_lucifugus
ENSORLG00000009919-9970.677ENSNGAG00000016684Rbm397781.022Nannospalax_galili
ENSORLG00000009919-9971.600ENSNBRG00000017035rbm39b10068.254Neolamprologus_brichardi
ENSORLG00000009919-10068.330ENSNBRG00000007057-7880.392Neolamprologus_brichardi
ENSORLG00000009919-9952.772ENSNLEG00000036235-10050.874Nomascus_leucogenys
ENSORLG00000009919-9978.878ENSNLEG00000010350-10078.878Nomascus_leucogenys
ENSORLG00000009919-8865.245ENSOPRG00000002183RBM397574.432Ochotona_princeps
ENSORLG00000009919-9969.868ENSODEG00000000850-7880.535Octodon_degus
ENSORLG00000009919-9971.645ENSODEG00000013774-7679.657Octodon_degus
ENSORLG00000009919-8181.127ENSONIG00000017310rbm39b7881.509Oreochromis_niloticus
ENSORLG00000009919-9979.331ENSONIG00000000274-10074.016Oreochromis_niloticus
ENSORLG00000009919-9968.165ENSOCUG00000007050RBM397781.022Oryctolagus_cuniculus
ENSORLG00000009919-9971.820ENSORLG00020021077rbm39b10073.964Oryzias_latipes_hni
ENSORLG00000009919-10099.205ENSORLG00020006098-10099.205Oryzias_latipes_hni
ENSORLG00000009919-9971.820ENSORLG00015016695rbm39b10073.964Oryzias_latipes_hsok
ENSORLG00000009919-10099.404ENSORLG00015002315-10099.404Oryzias_latipes_hsok
ENSORLG00000009919-9971.400ENSOMEG00000010704rbm39b10074.162Oryzias_melastigma
ENSORLG00000009919-10095.127ENSOMEG00000001685-10095.127Oryzias_melastigma
ENSORLG00000009919-9969.884ENSOGAG00000027149-7876.179Otolemur_garnettii
ENSORLG00000009919-9970.699ENSOARG00000014859RBM397780.882Ovis_aries
ENSORLG00000009919-9567.012ENSPPAG00000041179-9071.463Pan_paniscus
ENSORLG00000009919-9975.342ENSPPAG00000029710-10074.314Pan_paniscus
ENSORLG00000009919-9975.342ENSPPRG00000002157RBM3910074.314Panthera_pardus
ENSORLG00000009919-9975.147ENSPTIG00000009580RBM3910074.118Panthera_tigris_altaica
ENSORLG00000009919-8974.839ENSPTRG00000045535-10081.600Pan_troglodytes
ENSORLG00000009919-9975.342ENSPTRG00000049720-10081.600Pan_troglodytes
ENSORLG00000009919-8072.304ENSPTRG00000049437-8972.330Pan_troglodytes
ENSORLG00000009919-8072.304ENSPTRG00000046501-7872.549Pan_troglodytes
ENSORLG00000009919-9972.798ENSPANG00000021248RBM3910082.480Papio_anubis
ENSORLG00000009919-9973.048ENSPKIG00000017145rbm39a8084.171Paramormyrops_kingsleyae
ENSORLG00000009919-9974.656ENSPKIG00000007461-10077.358Paramormyrops_kingsleyae
ENSORLG00000009919-9972.795ENSPSIG00000017885RBM397780.482Pelodiscus_sinensis
ENSORLG00000009919-5575.439ENSPMGG00000023123rbm39b10075.439Periophthalmus_magnuspinnatus
ENSORLG00000009919-7481.720ENSPMGG00000021264-10081.989Periophthalmus_magnuspinnatus
ENSORLG00000009919-9970.677ENSPEMG00000021887Rbm397781.022Peromyscus_maniculatus_bairdii
ENSORLG00000009919-7874.873ENSPMAG00000005814RBM397574.092Petromyzon_marinus
ENSORLG00000009919-7774.235ENSPMAG00000004125RBM397869.476Petromyzon_marinus
ENSORLG00000009919-9973.524ENSPCIG00000027946RBM397881.572Phascolarctos_cinereus
ENSORLG00000009919-9970.238ENSPFOG00000013197rbm39b10073.176Poecilia_formosa
ENSORLG00000009919-10080.952ENSPFOG00000012350-9980.952Poecilia_formosa
ENSORLG00000009919-7489.247ENSPLAG00000013925-10089.247Poecilia_latipinna
ENSORLG00000009919-9970.238ENSPLAG00000017500rbm39b10073.176Poecilia_latipinna
ENSORLG00000009919-10080.952ENSPMEG00000002750-9980.952Poecilia_mexicana
ENSORLG00000009919-9970.238ENSPMEG00000007689rbm39b10073.176Poecilia_mexicana
ENSORLG00000009919-10082.903ENSPREG00000021088-10084.140Poecilia_reticulata
ENSORLG00000009919-9970.669ENSPREG00000015150rbm39b10072.638Poecilia_reticulata
ENSORLG00000009919-9970.677ENSPPYG00000010963RBM397781.022Pongo_abelii
ENSORLG00000009919-9969.786ENSPCAG00000008764RBM398075.912Procavia_capensis
ENSORLG00000009919-7173.743ENSPCOG00000025238-10073.464Propithecus_coquereli
ENSORLG00000009919-9975.342ENSPCOG00000027976-10082.480Propithecus_coquereli
ENSORLG00000009919-9872.328ENSPVAG00000014944RBM397781.022Pteropus_vampyrus
ENSORLG00000009919-9973.705ENSPNYG00000004315rbm39b9774.059Pundamilia_nyererei
ENSORLG00000009919-7488.831ENSPNYG00000010982-10088.831Pundamilia_nyererei
ENSORLG00000009919-7883.582ENSPNAG00000007852rbm39a10083.602Pygocentrus_nattereri
ENSORLG00000009919-9974.405ENSPNAG00000007787rbm39b10069.980Pygocentrus_nattereri
ENSORLG00000009919-9971.023ENSRNOG00000019848Rbm397781.327Rattus_norvegicus
ENSORLG00000009919-9971.023ENSRNOG00000049814LOC1009108827781.327Rattus_norvegicus
ENSORLG00000009919-9975.342ENSRBIG00000044413-10082.480Rhinopithecus_bieti
ENSORLG00000009919-8167.961ENSRBIG00000013669-10060.000Rhinopithecus_bieti
ENSORLG00000009919-9975.740ENSRROG00000037484RBM3910074.506Rhinopithecus_roxellana
ENSORLG00000009919-9958.020ENSSBOG00000031847-9955.050Saimiri_boliviensis_boliviensis
ENSORLG00000009919-9970.450ENSSBOG00000025642-10069.412Saimiri_boliviensis_boliviensis
ENSORLG00000009919-9973.524ENSSHAG00000018608RBM397781.572Sarcophilus_harrisii
ENSORLG00000009919-9972.542ENSSFOG00015003597rbm3910072.885Scleropages_formosus
ENSORLG00000009919-9975.442ENSSFOG00015017280-10075.977Scleropages_formosus
ENSORLG00000009919-9973.819ENSSMAG00000010777rbm39b10071.089Scophthalmus_maximus
ENSORLG00000009919-9980.268ENSSMAG00000006440-9973.563Scophthalmus_maximus
ENSORLG00000009919-10078.285ENSSDUG00000018191-10073.723Seriola_dumerili
ENSORLG00000009919-9974.016ENSSDUG00000014712rbm39b10074.851Seriola_dumerili
ENSORLG00000009919-10080.224ENSSLDG00000022188-10075.746Seriola_lalandi_dorsalis
ENSORLG00000009919-9974.016ENSSLDG00000006938rbm39b10074.851Seriola_lalandi_dorsalis
ENSORLG00000009919-7980.893ENSSARG00000007673RBM397781.022Sorex_araneus
ENSORLG00000009919-7278.689ENSSPUG00000012393RBM399878.320Sphenodon_punctatus
ENSORLG00000009919-9974.409ENSSPAG00000017157rbm39b10075.248Stegastes_partitus
ENSORLG00000009919-8390.670ENSSPAG00000021798-8490.602Stegastes_partitus
ENSORLG00000009919-9975.342ENSSSCG00000007309RBM3910074.314Sus_scrofa
ENSORLG00000009919-9971.347ENSTGUG00000003048RBM397781.174Taeniopygia_guttata
ENSORLG00000009919-9971.961ENSTRUG00000011352rbm39b10073.684Takifugu_rubripes
ENSORLG00000009919-8677.149ENSTNIG00000017904rbm39b9082.064Tetraodon_nigroviridis
ENSORLG00000009919-9974.291ENSTNIG00000005223-10068.053Tetraodon_nigroviridis
ENSORLG00000009919-7775.255ENSTBEG00000017320RBM397975.510Tupaia_belangeri
ENSORLG00000009919-9970.677ENSTTRG00000017039RBM397781.022Tursiops_truncatus
ENSORLG00000009919-9970.677ENSUAMG00000010443RBM398580.825Ursus_americanus
ENSORLG00000009919-9975.342ENSUMAG00000004302RBM3910074.314Ursus_maritimus
ENSORLG00000009919-9366.600ENSVPAG00000003819RBM397576.064Vicugna_pacos
ENSORLG00000009919-9975.342ENSVVUG00000001290RBM3910074.314Vulpes_vulpes
ENSORLG00000009919-8177.230ENSXETG00000007434rbm397876.291Xenopus_tropicalis
ENSORLG00000009919-7484.140ENSXCOG00000017255-10084.140Xiphophorus_couchianus
ENSORLG00000009919-9972.908ENSXCOG00000005456rbm39b10073.663Xiphophorus_couchianus
ENSORLG00000009919-9970.809ENSXMAG00000017099rbm39b10073.373Xiphophorus_maculatus
ENSORLG00000009919-7483.110ENSXMAG00000012463-10083.110Xiphophorus_maculatus

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