EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000009962 (Gene tree)
Gene ID: 101156904
Gene Symbol: rbm18
Alias: -
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 46195 bases
Position: chr12:15173668-15219862
Accession: 101156904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038682	RRM_1	PF00076.22	2.6e-14	1	1
ENSORLP00000012497	RRM_1	PF00076.22	2.7e-14	1	1
ENSORLP00000032107	RRM_1	PF00076.22	3.4e-14	1	1
ENSORLP00000040731	RRM_1	PF00076.22	8.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000044304	-	1987	-	ENSORLP00000032107	230 (aa)	-	-
ENSORLT00000012498	-	2488	XM_011481873	ENSORLP00000012497	202 (aa)	XP_011480175	H2M258
ENSORLT00000045777	-	2378	XM_011481874	ENSORLP00000038682	200 (aa)	XP_011480176	UPI0000E9C069
ENSORLT00000037424	-	2569	-	ENSORLP00000040731	229 (aa)	-	-

Gene Model

Click here to download ENSORLG00000009962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000009962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000009962	rbm18	90	67.956	ENSG00000119446	RBM18	92	63.536	Homo_sapiens
ENSORLG00000009962	rbm18	100	87.624	ENSAPOG00000001987	rbm18	100	87.624	Acanthochromis_polyacanthus
ENSORLG00000009962	rbm18	90	67.956	ENSAMEG00000000772	RBM18	92	63.536	Ailuropoda_melanoleuca
ENSORLG00000009962	rbm18	93	81.818	ENSACIG00000005001	rbm18	99	83.838	Amphilophus_citrinellus
ENSORLG00000009962	rbm18	100	88.000	ENSAOCG00000006762	rbm18	100	88.000	Amphiprion_ocellaris
ENSORLG00000009962	rbm18	100	88.000	ENSAPEG00000007972	rbm18	100	88.000	Amphiprion_percula
ENSORLG00000009962	rbm18	100	86.000	ENSATEG00000019164	rbm18	100	86.000	Anabas_testudineus
ENSORLG00000009962	rbm18	90	67.956	ENSANAG00000035441	RBM18	92	63.536	Aotus_nancymaae
ENSORLG00000009962	rbm18	100	90.594	ENSACLG00000019848	rbm18	100	90.594	Astatotilapia_calliptera
ENSORLG00000009962	rbm18	100	72.277	ENSAMXG00000035574	rbm18	100	70.297	Astyanax_mexicanus
ENSORLG00000009962	rbm18	90	66.851	ENSBTAG00000016367	RBM18	92	62.431	Bos_taurus
ENSORLG00000009962	rbm18	90	67.956	ENSCJAG00000046355	RBM18	92	63.536	Callithrix_jacchus
ENSORLG00000009962	rbm18	90	67.956	ENSCAFG00000030041	RBM18	92	63.536	Canis_familiaris
ENSORLG00000009962	rbm18	90	67.956	ENSCAFG00020015174	RBM18	92	63.536	Canis_lupus_dingo
ENSORLG00000009962	rbm18	90	66.851	ENSCHIG00000026444	RBM18	92	62.431	Capra_hircus
ENSORLG00000009962	rbm18	90	67.956	ENSTSYG00000030353	RBM18	92	63.536	Carlito_syrichta
ENSORLG00000009962	rbm18	90	67.403	ENSCPOG00000038004	RBM18	92	62.983	Cavia_porcellus
ENSORLG00000009962	rbm18	90	67.956	ENSCCAG00000035467	RBM18	92	63.536	Cebus_capucinus
ENSORLG00000009962	rbm18	90	67.956	ENSCATG00000035634	RBM18	92	63.536	Cercocebus_atys
ENSORLG00000009962	rbm18	90	67.956	ENSCLAG00000010773	RBM18	92	63.536	Chinchilla_lanigera
ENSORLG00000009962	rbm18	59	76.667	ENSCSAG00000013373	RBM18	77	75.893	Chlorocebus_sabaeus
ENSORLG00000009962	rbm18	75	67.763	ENSCHOG00000001341	RBM18	96	62.500	Choloepus_hoffmanni
ENSORLG00000009962	rbm18	90	69.061	ENSCPBG00000009885	RBM18	91	64.641	Chrysemys_picta_bellii
ENSORLG00000009962	rbm18	53	39.623	ENSCSAVG00000000409	-	80	39.623	Ciona_savignyi
ENSORLG00000009962	rbm18	90	68.508	ENSCANG00000029590	RBM18	92	64.088	Colobus_angolensis_palliatus
ENSORLG00000009962	rbm18	90	67.956	ENSCGRG00001014593	Rbm18	92	63.536	Cricetulus_griseus_chok1gshd
ENSORLG00000009962	rbm18	82	69.277	ENSCGRG00000012247	Rbm18	90	64.458	Cricetulus_griseus_crigri
ENSORLG00000009962	rbm18	100	84.500	ENSCSEG00000017587	rbm18	100	84.500	Cynoglossus_semilaevis
ENSORLG00000009962	rbm18	100	89.500	ENSCVAG00000012436	rbm18	89	88.293	Cyprinodon_variegatus
ENSORLG00000009962	rbm18	100	74.752	ENSDARG00000044255	rbm18	84	87.850	Danio_rerio
ENSORLG00000009962	rbm18	90	67.403	ENSDNOG00000031658	RBM18	92	62.983	Dasypus_novemcinctus
ENSORLG00000009962	rbm18	90	67.956	ENSDORG00000028540	Rbm18	92	63.536	Dipodomys_ordii
ENSORLG00000009962	rbm18	88	35.106	FBgn0030571	CG14414	99	33.023	Drosophila_melanogaster
ENSORLG00000009962	rbm18	90	58.659	ENSETEG00000009832	RBM18	92	58.659	Echinops_telfairi
ENSORLG00000009962	rbm18	77	59.355	ENSEBUG00000009127	rbm18	78	56.209	Eptatretus_burgeri
ENSORLG00000009962	rbm18	90	67.956	ENSEASG00005021084	RBM18	92	63.536	Equus_asinus_asinus
ENSORLG00000009962	rbm18	90	67.956	ENSECAG00000024639	RBM18	92	63.536	Equus_caballus
ENSORLG00000009962	rbm18	90	52.486	ENSEEUG00000002828	RBM18	92	49.724	Erinaceus_europaeus
ENSORLG00000009962	rbm18	99	75.127	ENSELUG00000005876	rbm18	96	73.057	Esox_lucius
ENSORLG00000009962	rbm18	90	67.956	ENSFCAG00000037774	RBM18	92	63.536	Felis_catus
ENSORLG00000009962	rbm18	75	65.789	ENSFALG00000001940	RBM18	92	61.935	Ficedula_albicollis
ENSORLG00000009962	rbm18	90	67.403	ENSFDAG00000012679	RBM18	92	62.983	Fukomys_damarensis
ENSORLG00000009962	rbm18	99	89.000	ENSFHEG00000012457	rbm18	99	89.000	Fundulus_heteroclitus
ENSORLG00000009962	rbm18	100	75.369	ENSGMOG00000019735	rbm18	100	75.369	Gadus_morhua
ENSORLG00000009962	rbm18	91	66.304	ENSGALG00000028167	RBM18	94	63.043	Gallus_gallus
ENSORLG00000009962	rbm18	100	89.000	ENSGAFG00000007767	rbm18	100	89.000	Gambusia_affinis
ENSORLG00000009962	rbm18	100	85.149	ENSGACG00000017348	rbm18	99	85.149	Gasterosteus_aculeatus
ENSORLG00000009962	rbm18	90	67.956	ENSGAGG00000018318	RBM18	91	63.536	Gopherus_agassizii
ENSORLG00000009962	rbm18	90	67.956	ENSGGOG00000011052	RBM18	92	63.536	Gorilla_gorilla
ENSORLG00000009962	rbm18	100	90.594	ENSHBUG00000015237	rbm18	100	90.594	Haplochromis_burtoni
ENSORLG00000009962	rbm18	90	67.403	ENSHGLG00000011073	RBM18	92	62.983	Heterocephalus_glaber_female
ENSORLG00000009962	rbm18	90	54.696	ENSHGLG00100006247	-	91	50.829	Heterocephalus_glaber_male
ENSORLG00000009962	rbm18	90	67.403	ENSHGLG00100005536	RBM18	92	62.983	Heterocephalus_glaber_male
ENSORLG00000009962	rbm18	100	85.644	ENSHCOG00000003148	rbm18	100	85.644	Hippocampus_comes
ENSORLG00000009962	rbm18	100	69.802	ENSIPUG00000021512	rbm18	84	66.990	Ictalurus_punctatus
ENSORLG00000009962	rbm18	90	67.956	ENSSTOG00000022388	-	92	63.536	Ictidomys_tridecemlineatus
ENSORLG00000009962	rbm18	76	67.742	ENSSTOG00000032266	-	81	62.987	Ictidomys_tridecemlineatus
ENSORLG00000009962	rbm18	90	65.193	ENSJJAG00000010974	-	92	60.773	Jaculus_jaculus
ENSORLG00000009962	rbm18	59	76.667	ENSJJAG00000009581	-	70	75.893	Jaculus_jaculus
ENSORLG00000009962	rbm18	100	91.089	ENSKMAG00000010679	rbm18	94	85.455	Kryptolebias_marmoratus
ENSORLG00000009962	rbm18	100	84.653	ENSLBEG00000023896	rbm18	100	84.653	Labrus_bergylta
ENSORLG00000009962	rbm18	67	72.263	ENSLACG00000009920	RBM18	88	76.033	Latimeria_chalumnae
ENSORLG00000009962	rbm18	90	67.403	ENSLAFG00000012134	RBM18	92	62.983	Loxodonta_africana
ENSORLG00000009962	rbm18	90	67.956	ENSMFAG00000000443	RBM18	92	63.536	Macaca_fascicularis
ENSORLG00000009962	rbm18	90	67.956	ENSMMUG00000011455	RBM18	92	63.536	Macaca_mulatta
ENSORLG00000009962	rbm18	90	67.956	ENSMNEG00000035374	RBM18	92	63.536	Macaca_nemestrina
ENSORLG00000009962	rbm18	90	67.956	ENSMLEG00000043105	RBM18	92	63.536	Mandrillus_leucophaeus
ENSORLG00000009962	rbm18	100	86.500	ENSMAMG00000009239	rbm18	100	86.500	Mastacembelus_armatus
ENSORLG00000009962	rbm18	100	90.500	ENSMZEG00005017921	rbm18	100	90.500	Maylandia_zebra
ENSORLG00000009962	rbm18	88	60.674	ENSMGAG00000016888	RBM18	97	57.459	Meleagris_gallopavo
ENSORLG00000009962	rbm18	90	67.403	ENSMAUG00000021365	Rbm18	92	62.983	Mesocricetus_auratus
ENSORLG00000009962	rbm18	90	68.508	ENSMICG00000046793	RBM18	92	64.088	Microcebus_murinus
ENSORLG00000009962	rbm18	90	67.403	ENSMOCG00000000613	Rbm18	92	62.983	Microtus_ochrogaster
ENSORLG00000009962	rbm18	100	74.146	ENSMMOG00000021319	rbm18	100	74.752	Mola_mola
ENSORLG00000009962	rbm18	75	68.421	ENSMODG00000019688	RBM18	96	63.158	Monodelphis_domestica
ENSORLG00000009962	rbm18	100	87.129	ENSMALG00000017766	rbm18	100	87.129	Monopterus_albus
ENSORLG00000009962	rbm18	90	67.403	MGP_CAROLIEiJ_G0023488	Rbm18	92	62.983	Mus_caroli
ENSORLG00000009962	rbm18	90	67.403	ENSMUSG00000026889	Rbm18	92	62.983	Mus_musculus
ENSORLG00000009962	rbm18	90	66.851	MGP_PahariEiJ_G0024945	Rbm18	92	62.431	Mus_pahari
ENSORLG00000009962	rbm18	90	67.403	MGP_SPRETEiJ_G0024405	Rbm18	92	62.983	Mus_spretus
ENSORLG00000009962	rbm18	90	67.956	ENSMPUG00000007246	RBM18	92	63.536	Mustela_putorius_furo
ENSORLG00000009962	rbm18	90	67.956	ENSMLUG00000013224	-	92	63.536	Myotis_lucifugus
ENSORLG00000009962	rbm18	90	67.956	ENSMLUG00000004794	-	92	63.536	Myotis_lucifugus
ENSORLG00000009962	rbm18	90	67.956	ENSNGAG00000000041	Rbm18	92	63.536	Nannospalax_galili
ENSORLG00000009962	rbm18	100	90.594	ENSNBRG00000021128	rbm18	100	90.594	Neolamprologus_brichardi
ENSORLG00000009962	rbm18	90	67.956	ENSNLEG00000017174	RBM18	92	63.536	Nomascus_leucogenys
ENSORLG00000009962	rbm18	90	54.144	ENSMEUG00000015704	RBM18	93	49.724	Notamacropus_eugenii
ENSORLG00000009962	rbm18	90	67.403	ENSOPRG00000010381	RBM18	92	62.983	Ochotona_princeps
ENSORLG00000009962	rbm18	90	67.403	ENSODEG00000002055	RBM18	92	62.983	Octodon_degus
ENSORLG00000009962	rbm18	100	90.500	ENSONIG00000003723	rbm18	100	90.500	Oreochromis_niloticus
ENSORLG00000009962	rbm18	90	67.403	ENSOANG00000008200	RBM18	92	62.983	Ornithorhynchus_anatinus
ENSORLG00000009962	rbm18	90	68.508	ENSOCUG00000008527	RBM18	92	64.088	Oryctolagus_cuniculus
ENSORLG00000009962	rbm18	100	100.000	ENSORLG00020013452	rbm18	100	100.000	Oryzias_latipes_hni
ENSORLG00000009962	rbm18	100	100.000	ENSORLG00015001711	rbm18	97	93.299	Oryzias_latipes_hsok
ENSORLG00000009962	rbm18	100	98.515	ENSOMEG00000001492	rbm18	100	98.515	Oryzias_melastigma
ENSORLG00000009962	rbm18	90	67.956	ENSOGAG00000015104	RBM18	92	63.536	Otolemur_garnettii
ENSORLG00000009962	rbm18	90	66.851	ENSOARG00000014228	RBM18	92	62.431	Ovis_aries
ENSORLG00000009962	rbm18	90	67.956	ENSPPAG00000023355	RBM18	92	63.536	Pan_paniscus
ENSORLG00000009962	rbm18	90	67.956	ENSPPRG00000011360	RBM18	92	63.536	Panthera_pardus
ENSORLG00000009962	rbm18	90	67.956	ENSPTIG00000007126	RBM18	92	63.536	Panthera_tigris_altaica
ENSORLG00000009962	rbm18	90	67.956	ENSPTRG00000021323	RBM18	92	63.536	Pan_troglodytes
ENSORLG00000009962	rbm18	90	67.956	ENSPANG00000025845	RBM18	92	63.536	Papio_anubis
ENSORLG00000009962	rbm18	63	82.540	ENSPKIG00000005430	rbm18	67	82.906	Paramormyrops_kingsleyae
ENSORLG00000009962	rbm18	90	69.061	ENSPSIG00000013631	RBM18	92	64.641	Pelodiscus_sinensis
ENSORLG00000009962	rbm18	98	81.218	ENSPMGG00000023951	rbm18	96	81.218	Periophthalmus_magnuspinnatus
ENSORLG00000009962	rbm18	78	60.377	ENSPMAG00000000630	rbm18	92	57.051	Petromyzon_marinus
ENSORLG00000009962	rbm18	90	69.061	ENSPCIG00000025526	RBM18	92	64.641	Phascolarctos_cinereus
ENSORLG00000009962	rbm18	100	89.000	ENSPFOG00000019706	rbm18	100	89.000	Poecilia_formosa
ENSORLG00000009962	rbm18	100	89.000	ENSPLAG00000005571	rbm18	100	89.000	Poecilia_latipinna
ENSORLG00000009962	rbm18	100	89.000	ENSPMEG00000013977	rbm18	100	89.000	Poecilia_mexicana
ENSORLG00000009962	rbm18	100	89.000	ENSPREG00000009157	rbm18	100	89.000	Poecilia_reticulata
ENSORLG00000009962	rbm18	90	67.956	ENSPPYG00000019569	RBM18	92	63.536	Pongo_abelii
ENSORLG00000009962	rbm18	59	76.667	ENSPCAG00000011245	RBM18	82	75.893	Procavia_capensis
ENSORLG00000009962	rbm18	90	67.956	ENSPCOG00000024474	RBM18	92	63.536	Propithecus_coquereli
ENSORLG00000009962	rbm18	90	67.956	ENSPVAG00000000863	RBM18	92	63.536	Pteropus_vampyrus
ENSORLG00000009962	rbm18	100	90.594	ENSPNYG00000012421	rbm18	100	90.594	Pundamilia_nyererei
ENSORLG00000009962	rbm18	100	73.267	ENSPNAG00000017660	rbm18	100	70.297	Pygocentrus_nattereri
ENSORLG00000009962	rbm18	90	69.061	ENSRNOG00000006763	Rbm18	92	66.298	Rattus_norvegicus
ENSORLG00000009962	rbm18	90	68.508	ENSRBIG00000040177	RBM18	92	64.088	Rhinopithecus_bieti
ENSORLG00000009962	rbm18	90	68.508	ENSRROG00000031364	RBM18	92	64.088	Rhinopithecus_roxellana
ENSORLG00000009962	rbm18	90	67.956	ENSSBOG00000024806	RBM18	92	63.536	Saimiri_boliviensis_boliviensis
ENSORLG00000009962	rbm18	90	69.061	ENSSHAG00000012257	RBM18	92	64.641	Sarcophilus_harrisii
ENSORLG00000009962	rbm18	93	73.797	ENSSFOG00015001100	rbm18	96	72.727	Scleropages_formosus
ENSORLG00000009962	rbm18	100	85.644	ENSSMAG00000020138	rbm18	100	85.644	Scophthalmus_maximus
ENSORLG00000009962	rbm18	100	87.000	ENSSDUG00000016203	rbm18	98	87.065	Seriola_dumerili
ENSORLG00000009962	rbm18	100	87.000	ENSSLDG00000016329	rbm18	100	87.000	Seriola_lalandi_dorsalis
ENSORLG00000009962	rbm18	75	65.789	ENSSPUG00000001601	RBM18	84	63.158	Sphenodon_punctatus
ENSORLG00000009962	rbm18	100	88.000	ENSSPAG00000005394	rbm18	100	88.000	Stegastes_partitus
ENSORLG00000009962	rbm18	90	66.851	ENSSSCG00000030089	RBM18	92	62.431	Sus_scrofa
ENSORLG00000009962	rbm18	75	65.132	ENSTGUG00000006802	RBM18	95	61.935	Taeniopygia_guttata
ENSORLG00000009962	rbm18	100	81.500	ENSTRUG00000005812	rbm18	100	81.500	Takifugu_rubripes
ENSORLG00000009962	rbm18	96	82.383	ENSTNIG00000009141	rbm18	98	82.383	Tetraodon_nigroviridis
ENSORLG00000009962	rbm18	75	67.763	ENSTBEG00000016520	RBM18	96	62.500	Tupaia_belangeri
ENSORLG00000009962	rbm18	90	67.956	ENSUAMG00000014431	RBM18	92	63.536	Ursus_americanus
ENSORLG00000009962	rbm18	90	67.956	ENSUMAG00000003445	RBM18	92	63.536	Ursus_maritimus
ENSORLG00000009962	rbm18	90	67.956	ENSVPAG00000008618	RBM18	92	63.536	Vicugna_pacos
ENSORLG00000009962	rbm18	90	67.956	ENSVVUG00000009442	RBM18	92	63.536	Vulpes_vulpes
ENSORLG00000009962	rbm18	90	62.431	ENSXETG00000016328	rbm18	92	60.221	Xenopus_tropicalis
ENSORLG00000009962	rbm18	100	89.109	ENSXMAG00000003538	rbm18	100	89.109	Xiphophorus_maculatus