EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000010006 (Gene tree)
Gene ID: 101173426
Gene Symbol: -
Alias: -
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4239 bases
Position: chr24:2538795-2543033
Accession: 101173426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000012556	zf-C2H2	PF00096.26	5.5e-37	1	7
ENSORLP00000012556	zf-C2H2	PF00096.26	5.5e-37	2	7
ENSORLP00000012556	zf-C2H2	PF00096.26	5.5e-37	3	7
ENSORLP00000012556	zf-C2H2	PF00096.26	5.5e-37	4	7
ENSORLP00000012556	zf-C2H2	PF00096.26	5.5e-37	5	7
ENSORLP00000012556	zf-C2H2	PF00096.26	5.5e-37	6	7
ENSORLP00000012556	zf-C2H2	PF00096.26	5.5e-37	7	7
ENSORLP00000012556	zf-met	PF12874.7	7.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012557	-	3131	XM_004083386	ENSORLP00000012556	812 (aa)	XP_004083434	H2M2B5

Gene Model

Click here to download ENSORLG00000010006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000010006	-	52	43.307	ENSORLG00000024174	-	84	37.674
ENSORLG00000010006	-	53	38.571	ENSORLG00000023497	-	57	38.571
ENSORLG00000010006	-	53	39.357	ENSORLG00000030630	-	97	39.676
ENSORLG00000010006	-	54	41.129	ENSORLG00000029172	-	64	41.129
ENSORLG00000010006	-	52	37.269	ENSORLG00000002268	-	94	37.269
ENSORLG00000010006	-	71	41.538	ENSORLG00000019731	ZBTB14	69	41.538
ENSORLG00000010006	-	61	30.942	ENSORLG00000012533	PRDM15	50	31.944
ENSORLG00000010006	-	51	32.381	ENSORLG00000024255	si:dkey-89b17.4	69	32.381
ENSORLG00000010006	-	55	46.154	ENSORLG00000023828	-	53	46.154
ENSORLG00000010006	-	50	42.079	ENSORLG00000024399	-	87	39.286
ENSORLG00000010006	-	53	39.631	ENSORLG00000027366	-	50	39.631
ENSORLG00000010006	-	70	50.467	ENSORLG00000006659	bcl6b	54	50.467

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010006	-	70	67.065	ENSAPOG00000012930	GZF1	94	66.667	Acanthochromis_polyacanthus
ENSORLG00000010006	-	98	62.972	ENSACIG00000004753	-	99	62.424	Amphilophus_citrinellus
ENSORLG00000010006	-	68	67.250	ENSAOCG00000024275	GZF1	92	66.667	Amphiprion_ocellaris
ENSORLG00000010006	-	99	64.650	ENSAPEG00000017195	GZF1	98	64.413	Amphiprion_percula
ENSORLG00000010006	-	85	56.088	ENSATEG00000018374	GZF1	88	77.273	Anabas_testudineus
ENSORLG00000010006	-	74	44.977	ENSANAG00000028240	GZF1	88	44.204	Aotus_nancymaae
ENSORLG00000010006	-	99	63.012	ENSACLG00000025866	GZF1	99	62.169	Astatotilapia_calliptera
ENSORLG00000010006	-	92	49.327	ENSAMXG00000017178	GZF1	91	49.383	Astyanax_mexicanus
ENSORLG00000010006	-	54	65.397	ENSCJAG00000000733	GZF1	63	64.110	Callithrix_jacchus
ENSORLG00000010006	-	55	63.609	ENSTSYG00000028054	GZF1	62	63.609	Carlito_syrichta
ENSORLG00000010006	-	76	44.461	ENSCAPG00000002173	GZF1	89	43.969	Cavia_aperea
ENSORLG00000010006	-	76	44.225	ENSCPOG00000010790	GZF1	89	43.969	Cavia_porcellus
ENSORLG00000010006	-	80	43.099	ENSCCAG00000035601	GZF1	63	64.110	Cebus_capucinus
ENSORLG00000010006	-	80	42.755	ENSCLAG00000014714	GZF1	59	66.234	Chinchilla_lanigera
ENSORLG00000010006	-	85	42.355	ENSCPBG00000023415	GZF1	86	45.120	Chrysemys_picta_bellii
ENSORLG00000010006	-	72	44.817	ENSCGRG00001003944	Gzf1	87	45.787	Cricetulus_griseus_chok1gshd
ENSORLG00000010006	-	72	44.817	ENSCGRG00000012721	Gzf1	87	45.787	Cricetulus_griseus_crigri
ENSORLG00000010006	-	99	57.295	ENSCSEG00000002270	GZF1	98	56.821	Cynoglossus_semilaevis
ENSORLG00000010006	-	99	56.848	ENSCVAG00000013068	-	98	57.716	Cyprinodon_variegatus
ENSORLG00000010006	-	70	48.479	ENSELUG00000013581	GZF1	75	53.667	Esox_lucius
ENSORLG00000010006	-	98	59.556	ENSFHEG00000020498	GZF1	99	59.803	Fundulus_heteroclitus
ENSORLG00000010006	-	72	57.380	ENSGMOG00000011017	GZF1	53	77.097	Gadus_morhua
ENSORLG00000010006	-	76	46.586	ENSGALG00000053640	GZF1	86	46.080	Gallus_gallus
ENSORLG00000010006	-	99	60.577	ENSGAFG00000008725	GZF1	98	59.312	Gambusia_affinis
ENSORLG00000010006	-	72	66.833	ENSGACG00000012415	GZF1	99	85.204	Gasterosteus_aculeatus
ENSORLG00000010006	-	99	62.954	ENSHBUG00000016502	-	99	62.424	Haplochromis_burtoni
ENSORLG00000010006	-	79	43.885	ENSHGLG00000008891	GZF1	62	62.426	Heterocephalus_glaber_female
ENSORLG00000010006	-	79	43.885	ENSHGLG00100015117	GZF1	62	62.426	Heterocephalus_glaber_male
ENSORLG00000010006	-	92	48.800	ENSHCOG00000004326	GZF1	59	58.225	Hippocampus_comes
ENSORLG00000010006	-	70	77.551	ENSKMAG00000001453	-	99	77.551	Kryptolebias_marmoratus
ENSORLG00000010006	-	100	57.857	ENSLBEG00000025803	-	99	57.688	Labrus_bergylta
ENSORLG00000010006	-	99	59.636	ENSMAMG00000011931	-	97	59.636	Mastacembelus_armatus
ENSORLG00000010006	-	99	63.196	ENSMZEG00005010711	-	99	62.545	Maylandia_zebra
ENSORLG00000010006	-	72	45.411	ENSMAUG00000019656	Gzf1	100	46.305	Mesocricetus_auratus
ENSORLG00000010006	-	76	43.373	ENSMOCG00000017816	Gzf1	89	43.969	Microtus_ochrogaster
ENSORLG00000010006	-	95	60.503	ENSMMOG00000004395	-	99	60.526	Mola_mola
ENSORLG00000010006	-	72	45.946	ENSMODG00000006238	GZF1	100	62.308	Monodelphis_domestica
ENSORLG00000010006	-	76	44.817	ENSMUSG00000027439	Gzf1	89	46.401	Mus_musculus
ENSORLG00000010006	-	76	39.697	ENSMLUG00000002194	GZF1	90	41.846	Myotis_lucifugus
ENSORLG00000010006	-	71	63.590	ENSNBRG00000019987	GZF1	97	63.590	Neolamprologus_brichardi
ENSORLG00000010006	-	72	67.822	ENSONIG00000000989	GZF1	100	67.327	Oreochromis_niloticus
ENSORLG00000010006	-	100	98.524	ENSORLG00020001395	-	100	98.524	Oryzias_latipes_hni
ENSORLG00000010006	-	100	98.030	ENSORLG00015015364	GZF1	100	98.030	Oryzias_latipes_hsok
ENSORLG00000010006	-	74	45.568	ENSPPAG00000028487	GZF1	88	45.412	Pan_paniscus
ENSORLG00000010006	-	91	46.727	ENSPKIG00000003781	GZF1	91	45.327	Paramormyrops_kingsleyae
ENSORLG00000010006	-	55	49.533	ENSPSIG00000014208	-	62	50.654	Pelodiscus_sinensis
ENSORLG00000010006	-	93	46.535	ENSPMGG00000003778	-	51	67.105	Periophthalmus_magnuspinnatus
ENSORLG00000010006	-	75	46.142	ENSPCIG00000013803	GZF1	88	45.315	Phascolarctos_cinereus
ENSORLG00000010006	-	99	60.339	ENSPFOG00000002393	GZF1	100	66.332	Poecilia_formosa
ENSORLG00000010006	-	99	58.212	ENSPLAG00000005232	GZF1	94	66.118	Poecilia_latipinna
ENSORLG00000010006	-	99	58.455	ENSPMEG00000020017	-	98	56.667	Poecilia_mexicana
ENSORLG00000010006	-	99	51.861	ENSPREG00000016398	GZF1	98	53.930	Poecilia_reticulata
ENSORLG00000010006	-	54	65.506	ENSPPYG00000010766	GZF1	71	63.804	Pongo_abelii
ENSORLG00000010006	-	62	63.401	ENSPNYG00000000788	-	82	61.850	Pundamilia_nyererei
ENSORLG00000010006	-	76	46.190	ENSRNOG00000004735	Gzf1	89	45.098	Rattus_norvegicus
ENSORLG00000010006	-	91	46.641	ENSSFOG00015008631	gzf1	51	59.121	Scleropages_formosus
ENSORLG00000010006	-	99	62.813	ENSSDUG00000008186	GZF1	98	61.859	Seriola_dumerili
ENSORLG00000010006	-	99	62.959	ENSSLDG00000002382	GZF1	98	61.905	Seriola_lalandi_dorsalis
ENSORLG00000010006	-	55	66.887	ENSSARG00000010285	GZF1	59	66.887	Sorex_araneus
ENSORLG00000010006	-	84	38.360	ENSSPUG00000004147	GZF1	86	41.693	Sphenodon_punctatus
ENSORLG00000010006	-	99	64.618	ENSSPAG00000011759	GZF1	97	65.363	Stegastes_partitus
ENSORLG00000010006	-	99	55.833	ENSTRUG00000006128	-	98	54.958	Takifugu_rubripes
ENSORLG00000010006	-	72	61.706	ENSTNIG00000010722	GZF1	100	61.706	Tetraodon_nigroviridis
ENSORLG00000010006	-	74	45.692	ENSTTRG00000011345	GZF1	88	44.462	Tursiops_truncatus
ENSORLG00000010006	-	60	63.830	ENSVVUG00000012086	GZF1	63	64.024	Vulpes_vulpes
ENSORLG00000010006	-	80	42.442	ENSXETG00000004510	gzf1	69	63.750	Xenopus_tropicalis
ENSORLG00000010006	-	99	60.314	ENSXMAG00000023249	GZF1	99	60.434	Xiphophorus_maculatus