EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000010018 (Gene tree)
Gene ID: 101170530
Gene Symbol: rc3h2
Alias: -
Full Name: roquin-2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 21944 bases
Position: chr12:15305950-15327893
Accession: 101170530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000012569	zf-CCCH	PF00642.24	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012570	-	7681	XM_023960698	ENSORLP00000012569	1143 (aa)	XP_023816466	H2M2C7

Gene Model

Click here to download ENSORLG00000010018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010018	rc3h2	92	56.156	ENSG00000056586	RC3H2	94	87.528	Homo_sapiens
ENSORLG00000010018	rc3h2	100	84.097	ENSAPOG00000002117	rc3h2	100	84.183	Acanthochromis_polyacanthus
ENSORLG00000010018	rc3h2	92	56.256	ENSAMEG00000006498	RC3H2	91	56.256	Ailuropoda_melanoleuca
ENSORLG00000010018	rc3h2	100	84.183	ENSAPEG00000007757	rc3h2	100	84.270	Amphiprion_percula
ENSORLG00000010018	rc3h2	100	81.629	ENSATEG00000019414	rc3h2	100	81.629	Anabas_testudineus
ENSORLG00000010018	rc3h2	92	56.394	ENSAPLG00000013920	RC3H2	91	56.472	Anas_platyrhynchos
ENSORLG00000010018	rc3h2	92	56.622	ENSANAG00000030862	RC3H2	94	87.528	Aotus_nancymaae
ENSORLG00000010018	rc3h2	100	80.463	ENSACLG00000023136	rc3h2	100	80.463	Astatotilapia_calliptera
ENSORLG00000010018	rc3h2	95	65.749	ENSAMXG00000006778	rc3h2	100	66.667	Astyanax_mexicanus
ENSORLG00000010018	rc3h2	92	56.228	ENSBTAG00000023867	RC3H2	91	56.356	Bos_taurus
ENSORLG00000010018	rc3h2	92	56.622	ENSCJAG00000020050	RC3H2	94	87.528	Callithrix_jacchus
ENSORLG00000010018	rc3h2	92	56.128	ENSCAFG00020015288	RC3H2	94	87.528	Canis_lupus_dingo
ENSORLG00000010018	rc3h2	92	55.911	ENSCHIG00000019319	RC3H2	91	56.128	Capra_hircus
ENSORLG00000010018	rc3h2	84	50.888	ENSCAPG00000017086	RC3H2	93	50.392	Cavia_aperea
ENSORLG00000010018	rc3h2	92	56.050	ENSCPOG00000008511	RC3H2	91	55.961	Cavia_porcellus
ENSORLG00000010018	rc3h2	92	56.723	ENSCCAG00000001404	RC3H2	94	87.528	Cebus_capucinus
ENSORLG00000010018	rc3h2	92	56.156	ENSCATG00000036655	RC3H2	94	87.528	Cercocebus_atys
ENSORLG00000010018	rc3h2	92	56.128	ENSCLAG00000013261	RC3H2	91	55.950	Chinchilla_lanigera
ENSORLG00000010018	rc3h2	80	53.200	ENSCSAG00000013416	RC3H2	90	53.100	Chlorocebus_sabaeus
ENSORLG00000010018	rc3h2	92	55.833	ENSCPBG00000009811	RC3H2	91	56.000	Chrysemys_picta_bellii
ENSORLG00000010018	rc3h2	92	56.156	ENSCANG00000043140	RC3H2	94	87.528	Colobus_angolensis_palliatus
ENSORLG00000010018	rc3h2	93	55.673	ENSCGRG00001010006	Rc3h2	92	55.595	Cricetulus_griseus_chok1gshd
ENSORLG00000010018	rc3h2	71	62.382	ENSCGRG00000009255	Rc3h2	77	62.411	Cricetulus_griseus_crigri
ENSORLG00000010018	rc3h2	100	77.455	ENSCSEG00000017460	rc3h2	100	77.455	Cynoglossus_semilaevis
ENSORLG00000010018	rc3h2	99	76.348	ENSCVAG00000012202	rc3h2	100	76.609	Cyprinodon_variegatus
ENSORLG00000010018	rc3h2	99	61.417	ENSDARG00000063050	rc3h2	100	61.399	Danio_rerio
ENSORLG00000010018	rc3h2	92	55.861	ENSDNOG00000014557	RC3H2	91	55.950	Dasypus_novemcinctus
ENSORLG00000010018	rc3h2	93	56.074	ENSDORG00000006398	Rc3h2	92	55.986	Dipodomys_ordii
ENSORLG00000010018	rc3h2	92	56.410	ENSEASG00005020897	RC3H2	94	82.851	Equus_asinus_asinus
ENSORLG00000010018	rc3h2	92	56.622	ENSECAG00000022176	RC3H2	91	56.267	Equus_caballus
ENSORLG00000010018	rc3h2	100	68.131	ENSELUG00000006105	rc3h2	100	68.217	Esox_lucius
ENSORLG00000010018	rc3h2	92	56.267	ENSFCAG00000007375	RC3H2	91	56.267	Felis_catus
ENSORLG00000010018	rc3h2	92	56.161	ENSFALG00000002011	RC3H2	91	56.239	Ficedula_albicollis
ENSORLG00000010018	rc3h2	92	56.495	ENSFDAG00000012477	RC3H2	91	56.050	Fukomys_damarensis
ENSORLG00000010018	rc3h2	99	77.210	ENSFHEG00000012272	rc3h2	100	77.249	Fundulus_heteroclitus
ENSORLG00000010018	rc3h2	68	68.130	ENSGMOG00000016709	-	99	68.632	Gadus_morhua
ENSORLG00000010018	rc3h2	92	56.039	ENSGALG00000001253	RC3H2	91	56.117	Gallus_gallus
ENSORLG00000010018	rc3h2	96	77.627	ENSGAFG00000007679	rc3h2	100	77.627	Gambusia_affinis
ENSORLG00000010018	rc3h2	74	77.662	ENSGACG00000017369	rc3h2	100	95.249	Gasterosteus_aculeatus
ENSORLG00000010018	rc3h2	92	56.184	ENSGAGG00000018295	RC3H2	98	56.634	Gopherus_agassizii
ENSORLG00000010018	rc3h2	92	56.156	ENSGGOG00000017062	RC3H2	94	87.528	Gorilla_gorilla
ENSORLG00000010018	rc3h2	100	81.629	ENSHBUG00000003976	rc3h2	100	81.629	Haplochromis_burtoni
ENSORLG00000010018	rc3h2	92	56.178	ENSHGLG00100018015	RC3H2	91	56.000	Heterocephalus_glaber_male
ENSORLG00000010018	rc3h2	100	72.147	ENSHCOG00000003006	rc3h2	100	71.976	Hippocampus_comes
ENSORLG00000010018	rc3h2	100	56.727	ENSIPUG00000021433	rc3h2	100	57.966	Ictalurus_punctatus
ENSORLG00000010018	rc3h2	92	56.317	ENSSTOG00000010655	RC3H2	91	56.139	Ictidomys_tridecemlineatus
ENSORLG00000010018	rc3h2	92	56.406	ENSJJAG00000022376	Rc3h2	91	56.139	Jaculus_jaculus
ENSORLG00000010018	rc3h2	100	76.903	ENSKMAG00000010936	rc3h2	100	77.163	Kryptolebias_marmoratus
ENSORLG00000010018	rc3h2	99	55.556	ENSLOCG00000002894	rc3h2	96	56.399	Lepisosteus_oculatus
ENSORLG00000010018	rc3h2	92	56.145	ENSLAFG00000003521	RC3H2	91	55.880	Loxodonta_africana
ENSORLG00000010018	rc3h2	87	87.330	ENSMFAG00000035621	RC3H2	94	87.528	Macaca_fascicularis
ENSORLG00000010018	rc3h2	92	56.256	ENSMMUG00000021134	RC3H2	94	87.528	Macaca_mulatta
ENSORLG00000010018	rc3h2	92	56.156	ENSMNEG00000031599	RC3H2	94	85.301	Macaca_nemestrina
ENSORLG00000010018	rc3h2	92	56.256	ENSMLEG00000033809	RC3H2	94	87.528	Mandrillus_leucophaeus
ENSORLG00000010018	rc3h2	100	81.629	ENSMZEG00005017019	rc3h2	100	81.629	Maylandia_zebra
ENSORLG00000010018	rc3h2	92	56.206	ENSMGAG00000007984	RC3H2	91	56.283	Meleagris_gallopavo
ENSORLG00000010018	rc3h2	74	61.477	ENSMAUG00000003117	Rc3h2	83	61.093	Mesocricetus_auratus
ENSORLG00000010018	rc3h2	92	55.516	ENSMICG00000003227	RC3H2	94	87.305	Microcebus_murinus
ENSORLG00000010018	rc3h2	92	56.328	ENSMOCG00000009592	Rc3h2	91	56.150	Microtus_ochrogaster
ENSORLG00000010018	rc3h2	84	93.418	ENSMMOG00000021305	rc3h2	99	93.418	Mola_mola
ENSORLG00000010018	rc3h2	92	56.117	ENSMODG00000019725	RC3H2	76	56.244	Monodelphis_domestica
ENSORLG00000010018	rc3h2	92	56.947	MGP_CAROLIEiJ_G0023516	Rc3h2	94	87.361	Mus_caroli
ENSORLG00000010018	rc3h2	92	56.050	ENSMUSG00000075376	Rc3h2	94	87.361	Mus_musculus
ENSORLG00000010018	rc3h2	92	56.050	MGP_PahariEiJ_G0024969	Rc3h2	94	87.361	Mus_pahari
ENSORLG00000010018	rc3h2	92	55.961	MGP_SPRETEiJ_G0024436	Rc3h2	94	87.361	Mus_spretus
ENSORLG00000010018	rc3h2	92	56.356	ENSMPUG00000014141	RC3H2	91	56.356	Mustela_putorius_furo
ENSORLG00000010018	rc3h2	92	56.406	ENSMLUG00000013992	RC3H2	91	56.356	Myotis_lucifugus
ENSORLG00000010018	rc3h2	100	81.629	ENSNBRG00000009276	rc3h2	100	81.629	Neolamprologus_brichardi
ENSORLG00000010018	rc3h2	92	55.732	ENSNLEG00000017204	RC3H2	94	87.528	Nomascus_leucogenys
ENSORLG00000010018	rc3h2	54	87.747	ENSMEUG00000001299	-	55	87.747	Notamacropus_eugenii
ENSORLG00000010018	rc3h2	68	57.090	ENSOPRG00000000135	RC3H2	74	57.516	Ochotona_princeps
ENSORLG00000010018	rc3h2	100	80.805	ENSONIG00000003945	rc3h2	100	80.805	Oreochromis_niloticus
ENSORLG00000010018	rc3h2	91	56.530	ENSOANG00000008194	RC3H2	99	56.658	Ornithorhynchus_anatinus
ENSORLG00000010018	rc3h2	93	56.151	ENSOCUG00000008804	RC3H2	92	56.277	Oryctolagus_cuniculus
ENSORLG00000010018	rc3h2	100	98.775	ENSORLG00020013257	rc3h2	100	98.775	Oryzias_latipes_hni
ENSORLG00000010018	rc3h2	100	98.863	ENSORLG00015001525	rc3h2	100	98.863	Oryzias_latipes_hsok
ENSORLG00000010018	rc3h2	100	94.410	ENSOMEG00000023540	rc3h2	100	94.410	Oryzias_melastigma
ENSORLG00000010018	rc3h2	92	55.950	ENSOGAG00000010678	RC3H2	91	55.989	Otolemur_garnettii
ENSORLG00000010018	rc3h2	92	56.039	ENSOARG00000013965	RC3H2	91	56.256	Ovis_aries
ENSORLG00000010018	rc3h2	92	56.156	ENSPPAG00000036013	RC3H2	94	87.528	Pan_paniscus
ENSORLG00000010018	rc3h2	92	56.256	ENSPPRG00000008698	RC3H2	97	57.646	Panthera_pardus
ENSORLG00000010018	rc3h2	92	56.256	ENSPTIG00000014257	RC3H2	97	57.646	Panthera_tigris_altaica
ENSORLG00000010018	rc3h2	92	56.156	ENSPTRG00000021339	RC3H2	94	87.528	Pan_troglodytes
ENSORLG00000010018	rc3h2	92	54.739	ENSPANG00000025840	RC3H2	94	83.964	Papio_anubis
ENSORLG00000010018	rc3h2	99	63.057	ENSPKIG00000021910	rc3h2	96	62.795	Paramormyrops_kingsleyae
ENSORLG00000010018	rc3h2	92	56.078	ENSPSIG00000005393	RC3H2	91	56.244	Pelodiscus_sinensis
ENSORLG00000010018	rc3h2	85	93.905	ENSPMGG00000023963	rc3h2	95	93.905	Periophthalmus_magnuspinnatus
ENSORLG00000010018	rc3h2	92	56.762	ENSPEMG00000023441	Rc3h2	91	56.317	Peromyscus_maniculatus_bairdii
ENSORLG00000010018	rc3h2	87	87.557	ENSPCIG00000025559	RC3H2	90	87.557	Phascolarctos_cinereus
ENSORLG00000010018	rc3h2	97	77.748	ENSPFOG00000019699	rc3h2	100	75.575	Poecilia_formosa
ENSORLG00000010018	rc3h2	91	68.959	ENSPLAG00000005799	rc3h2	97	69.150	Poecilia_latipinna
ENSORLG00000010018	rc3h2	97	77.520	ENSPMEG00000014187	rc3h2	97	77.728	Poecilia_mexicana
ENSORLG00000010018	rc3h2	99	77.720	ENSPREG00000008979	rc3h2	100	77.720	Poecilia_reticulata
ENSORLG00000010018	rc3h2	78	75.099	ENSPCAG00000010154	RC3H2	77	75.099	Procavia_capensis
ENSORLG00000010018	rc3h2	100	80.720	ENSPNYG00000012063	rc3h2	100	80.720	Pundamilia_nyererei
ENSORLG00000010018	rc3h2	96	62.466	ENSPNAG00000017502	rc3h2	96	62.422	Pygocentrus_nattereri
ENSORLG00000010018	rc3h2	92	56.178	ENSRNOG00000009196	Rc3h2	94	56.217	Rattus_norvegicus
ENSORLG00000010018	rc3h2	92	56.433	ENSRBIG00000032579	RC3H2	94	87.528	Rhinopithecus_bieti
ENSORLG00000010018	rc3h2	92	56.344	ENSRROG00000043784	RC3H2	94	87.528	Rhinopithecus_roxellana
ENSORLG00000010018	rc3h2	92	56.356	ENSSBOG00000029100	RC3H2	94	87.528	Saimiri_boliviensis_boliviensis
ENSORLG00000010018	rc3h2	92	55.830	ENSSHAG00000007498	RC3H2	91	56.145	Sarcophilus_harrisii
ENSORLG00000010018	rc3h2	100	81.186	ENSSMAG00000020048	rc3h2	100	81.529	Scophthalmus_maximus
ENSORLG00000010018	rc3h2	100	83.333	ENSSDUG00000016022	rc3h2	100	83.420	Seriola_dumerili
ENSORLG00000010018	rc3h2	100	83.161	ENSSLDG00000016070	rc3h2	100	83.247	Seriola_lalandi_dorsalis
ENSORLG00000010018	rc3h2	92	56.344	ENSSARG00000012329	RC3H2	91	56.217	Sorex_araneus
ENSORLG00000010018	rc3h2	92	55.989	ENSSPUG00000001457	RC3H2	91	55.802	Sphenodon_punctatus
ENSORLG00000010018	rc3h2	100	84.456	ENSSPAG00000005233	rc3h2	100	84.542	Stegastes_partitus
ENSORLG00000010018	rc3h2	92	56.394	ENSSSCG00000005575	RC3H2	92	87.305	Sus_scrofa
ENSORLG00000010018	rc3h2	92	56.417	ENSTGUG00000006889	-	91	56.495	Taeniopygia_guttata
ENSORLG00000010018	rc3h2	85	73.124	ENSTNIG00000004942	rc3h2	98	72.812	Tetraodon_nigroviridis
ENSORLG00000010018	rc3h2	70	62.470	ENSTBEG00000009622	RC3H2	78	62.159	Tupaia_belangeri
ENSORLG00000010018	rc3h2	85	66.710	ENSTTRG00000016954	RC3H2	84	66.970	Tursiops_truncatus
ENSORLG00000010018	rc3h2	92	56.267	ENSUAMG00000015355	RC3H2	91	56.267	Ursus_americanus
ENSORLG00000010018	rc3h2	92	56.267	ENSUMAG00000003161	RC3H2	94	87.528	Ursus_maritimus
ENSORLG00000010018	rc3h2	92	56.306	ENSVPAG00000005994	RC3H2	91	56.217	Vicugna_pacos
ENSORLG00000010018	rc3h2	92	56.128	ENSVVUG00000009519	RC3H2	94	56.089	Vulpes_vulpes
ENSORLG00000010018	rc3h2	99	68.541	ENSXCOG00000005002	rc3h2	94	95.238	Xiphophorus_couchianus
ENSORLG00000010018	rc3h2	99	77.217	ENSXMAG00000001724	rc3h2	100	77.304	Xiphophorus_maculatus