EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000010115 (Gene tree)
Gene ID
101155630
Gene Symbol
rab23
Alias
-
Full Name
RAB23%2C member RAS oncogene family
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
4001 bases
Position
chr15:24436344-24440344
Accession
101155630
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000034901GTP_EFTUPF00009.272.2e-0611
ENSORLP00000012683GTP_EFTUPF00009.274.3e-0611
ENSORLP00000012683MMR_HSR1PF01926.232.3e-0611
ENSORLP00000034901MMR_HSR1PF01926.232.6e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000012684-615-ENSORLP00000012683204 (aa)-H2M2N7
ENSORLT00000029519-3409XM_004077200ENSORLP00000034901235 (aa)XP_004077248UPI0000EA14DF
Gene Model
Click here to download ENSORLG00000010115's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010115's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000010115rab237336.842ENSORLG00000008345-6836.806
ENSORLG00000010115rab237337.500ENSORLG00000001850RAB39B6837.500
ENSORLG00000010115rab239531.140ENSORLG00000013432rab2a9133.679
ENSORLG00000010115rab239536.548ENSORLG00000016290rab6bb8836.216
ENSORLG00000010115rab237435.526ENSORLG00000025819-7836.111
ENSORLG00000010115rab237832.979ENSORLG00000029921-8232.955
ENSORLG00000010115rab237536.129ENSORLG00000010846rab157037.333
ENSORLG00000010115rab237935.583ENSORLG00000012158rab25a6835.417
ENSORLG00000010115rab238736.715ENSORLG00000029812rab3010036.715
ENSORLG00000010115rab237139.865ENSORLG00000030642zgc:1015597037.576
ENSORLG00000010115rab237032.414ENSORLG00000024102kras8533.333
ENSORLG00000010115rab237534.194ENSORLG00000024116RAB157435.065
ENSORLG00000010115rab237436.184ENSORLG00000003882rab5c7234.177
ENSORLG00000010115rab239434.673ENSORLG00000028885rab35b8935.754
ENSORLG00000010115rab237336.184ENSORLG00000022335rab42a6736.735
ENSORLG00000010115rab238531.373ENSORLG00000006628-8730.645
ENSORLG00000010115rab237740.994ENSORLG00000004394rab34a6836.898
ENSORLG00000010115rab238335.122ENSORLG00000027892RAB299134.211
ENSORLG00000010115rab238233.838ENSORLG00000006405rab9b8732.796
ENSORLG00000010115rab239833.168ENSORLG00000021846-9034.615
ENSORLG00000010115rab237042.177ENSORLG00000003119rab34b5538.255
ENSORLG00000010115rab237936.196ENSORLG00000015307rab11ba6637.063
ENSORLG00000010115rab237835.000ENSORLG00000001098si:dkey-16l2.167335.065
ENSORLG00000010115rab239633.981ENSORLG00000001351-7735.714
ENSORLG00000010115rab237439.623ENSORLG00000000937-7139.869
ENSORLG00000010115rab238233.721ENSORLG00000025098si:dkey-13a21.49133.871
ENSORLG00000010115rab239434.300ENSORLG00000016126rab11al8734.043
ENSORLG00000010115rab237537.013ENSORLG00000004624rab18a8436.047
ENSORLG00000010115rab237530.909ENSORLG00000026940rasl11a6030.065
ENSORLG00000010115rab237936.196ENSORLG00000013938rab11bb7934.302
ENSORLG00000010115rab238737.640ENSORLG00000000602zgc:1719277439.873
ENSORLG00000010115rab238037.195ENSORLG00000018331RAB11A8034.884
ENSORLG00000010115rab236930.909ENSORLG00000018119si:ch73-116o1.27630.909
ENSORLG00000010115rab237832.979ENSORLG00000007406rab148232.955
ENSORLG00000010115rab238837.569ENSORLG00000016135rab25b9431.892
ENSORLG00000010115rab237439.474ENSORLG00000001566rhebl17839.583
ENSORLG00000010115rab237337.013ENSORLG00000017806rab9a7335.616
ENSORLG00000010115rab239036.508ENSORLG00000025395-8836.723
ENSORLG00000010115rab237636.585ENSORLG00000002071-6335.526
ENSORLG00000010115rab237435.526ENSORLG00000012261rab5aa7433.540
ENSORLG00000010115rab237635.359ENSORLG00000024558-6834.940
ENSORLG00000010115rab239633.831ENSORLG00000029090-7835.714
ENSORLG00000010115rab237031.944ENSORLG00000018912hrasb7632.877
ENSORLG00000010115rab237031.724ENSORLG00000024443zgc:555587732.877
ENSORLG00000010115rab237834.568ENSORLG00000003902rab127732.990
ENSORLG00000010115rab237437.500ENSORLG00000003681rheb7838.194
ENSORLG00000010115rab237135.838ENSORLG00000030566rab33a5735.404
ENSORLG00000010115rab237936.585ENSORLG00000030109rab33ba6436.184
ENSORLG00000010115rab237341.333ENSORLG00000027669RAB416941.096
ENSORLG00000010115rab239032.432ENSORLG00000025519rras9132.432
ENSORLG00000010115rab239334.555ENSORLG00000028104rab1ab8436.257
ENSORLG00000010115rab239133.690ENSORLG00000016555rab3db8832.787
ENSORLG00000010115rab237536.364ENSORLG00000009609rab18b8336.047
ENSORLG00000010115rab237440.260ENSORLG00000014099si:dkey-34d22.57140.645
ENSORLG00000010115rab239535.025ENSORLG00000026197rab6a8834.595
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000010115rab239981.780ENSG00000112210RAB239981.780Homo_sapiens
ENSORLG00000010115rab2310091.489ENSAPOG00000008892rab2310091.489Acanthochromis_polyacanthus
ENSORLG00000010115rab239982.203ENSAMEG00000006825RAB239982.203Ailuropoda_melanoleuca
ENSORLG00000010115rab2310092.157ENSACIG00000020496rab2310092.157Amphilophus_citrinellus
ENSORLG00000010115rab2310092.157ENSAOCG00000004234rab2310092.157Amphiprion_ocellaris
ENSORLG00000010115rab2310092.157ENSAPEG00000019758rab2310092.157Amphiprion_percula
ENSORLG00000010115rab2310091.667ENSATEG00000020913rab2310091.667Anabas_testudineus
ENSORLG00000010115rab237890.000ENSAPLG00000003715RAB2310090.395Anas_platyrhynchos
ENSORLG00000010115rab239979.325ENSACAG00000006656RAB239979.325Anolis_carolinensis
ENSORLG00000010115rab239981.780ENSANAG00000027052-9981.780Aotus_nancymaae
ENSORLG00000010115rab2310092.766ENSACLG00000002819rab2310092.766Astatotilapia_calliptera
ENSORLG00000010115rab2310087.379ENSAMXG00000014960rab2310087.379Astyanax_mexicanus
ENSORLG00000010115rab239980.932ENSBTAG00000005362RAB239980.932Bos_taurus
ENSORLG00000010115rab239981.780ENSCJAG00000010247RAB239981.780Callithrix_jacchus
ENSORLG00000010115rab239982.627ENSCAFG00000002459RAB239982.627Canis_familiaris
ENSORLG00000010115rab239982.627ENSCAFG00020015900RAB239982.627Canis_lupus_dingo
ENSORLG00000010115rab239980.932ENSCHIG00000009815RAB239980.932Capra_hircus
ENSORLG00000010115rab2310081.857ENSTSYG00000029126RAB2310081.857Carlito_syrichta
ENSORLG00000010115rab239979.149ENSCPOG00000030218RAB239979.149Cavia_porcellus
ENSORLG00000010115rab239981.356ENSCCAG00000020364RAB239981.356Cebus_capucinus
ENSORLG00000010115rab239982.203ENSCATG00000027876RAB239982.203Cercocebus_atys
ENSORLG00000010115rab239980.085ENSCLAG00000000797RAB239980.085Chinchilla_lanigera
ENSORLG00000010115rab239981.356ENSCSAG00000013438RAB239981.356Chlorocebus_sabaeus
ENSORLG00000010115rab239982.203ENSCPBG00000022640RAB239982.203Chrysemys_picta_bellii
ENSORLG00000010115rab2310063.374ENSCING00000001155-10065.021Ciona_intestinalis
ENSORLG00000010115rab2310061.826ENSCSAVG00000001356-10062.397Ciona_savignyi
ENSORLG00000010115rab239981.356ENSCANG00000031065RAB239981.356Colobus_angolensis_palliatus
ENSORLG00000010115rab239982.627ENSCGRG00001008994Rab239982.627Cricetulus_griseus_chok1gshd
ENSORLG00000010115rab239981.702ENSCGRG00000013630Rab239981.702Cricetulus_griseus_crigri
ENSORLG00000010115rab2310091.667ENSCSEG00000010565rab2310091.667Cynoglossus_semilaevis
ENSORLG00000010115rab2310090.686ENSCVAG00000020501rab2310090.686Cyprinodon_variegatus
ENSORLG00000010115rab2310087.342ENSDARG00000004151rab2310087.342Danio_rerio
ENSORLG00000010115rab239980.508ENSDNOG00000015501RAB239980.508Dasypus_novemcinctus
ENSORLG00000010115rab2310080.169ENSDORG00000028344Rab2310080.169Dipodomys_ordii
ENSORLG00000010115rab238570.520FBgn0037364Rab238261.233Drosophila_melanogaster
ENSORLG00000010115rab239765.086ENSEBUG00000010861-9265.086Eptatretus_burgeri
ENSORLG00000010115rab239981.356ENSEASG00005003529RAB239981.356Equus_asinus_asinus
ENSORLG00000010115rab239981.356ENSECAG00000013427RAB239981.356Equus_caballus
ENSORLG00000010115rab2310081.013ENSEEUG00000015045RAB2310081.013Erinaceus_europaeus
ENSORLG00000010115rab2310086.809ENSELUG00000020788rab2310086.809Esox_lucius
ENSORLG00000010115rab239982.627ENSFCAG00000044358RAB239982.627Felis_catus
ENSORLG00000010115rab239982.203ENSFALG00000001708RAB239982.203Ficedula_albicollis
ENSORLG00000010115rab239980.508ENSFDAG00000014834RAB239980.508Fukomys_damarensis
ENSORLG00000010115rab2310090.213ENSFHEG00000023069rab2310090.213Fundulus_heteroclitus
ENSORLG00000010115rab2310087.234ENSGMOG00000005102rab2310087.234Gadus_morhua
ENSORLG00000010115rab239982.627ENSGALG00000016279RAB239982.627Gallus_gallus
ENSORLG00000010115rab2310090.213ENSGAFG00000007684rab2310090.213Gambusia_affinis
ENSORLG00000010115rab2310090.213ENSGACG00000006151rab2310090.213Gasterosteus_aculeatus
ENSORLG00000010115rab239982.627ENSGAGG00000012709RAB239982.627Gopherus_agassizii
ENSORLG00000010115rab2310093.137ENSHBUG00000007966rab2310093.137Haplochromis_burtoni
ENSORLG00000010115rab239967.500ENSHGLG00000009371-9966.667Heterocephalus_glaber_female
ENSORLG00000010115rab239981.780ENSHGLG00000013030-9981.780Heterocephalus_glaber_female
ENSORLG00000010115rab239967.500ENSHGLG00100017177-9966.667Heterocephalus_glaber_male
ENSORLG00000010115rab239981.780ENSHGLG00100005945-9981.780Heterocephalus_glaber_male
ENSORLG00000010115rab2310089.706ENSHCOG00000013919rab2310089.706Hippocampus_comes
ENSORLG00000010115rab2310086.408ENSIPUG00000016494rab2310086.408Ictalurus_punctatus
ENSORLG00000010115rab239982.203ENSSTOG00000010962RAB239982.203Ictidomys_tridecemlineatus
ENSORLG00000010115rab239980.932ENSJJAG00000020094Rab239980.932Jaculus_jaculus
ENSORLG00000010115rab2310090.638ENSKMAG00000018270rab2310090.638Kryptolebias_marmoratus
ENSORLG00000010115rab2310090.686ENSLBEG00000013176rab2310090.686Labrus_bergylta
ENSORLG00000010115rab2310085.232ENSLACG00000004025RAB2310085.232Latimeria_chalumnae
ENSORLG00000010115rab2310084.167ENSLOCG00000016999rab2310084.167Lepisosteus_oculatus
ENSORLG00000010115rab239982.203ENSLAFG00000007209RAB239982.203Loxodonta_africana
ENSORLG00000010115rab239982.203ENSMFAG00000032369RAB239982.203Macaca_fascicularis
ENSORLG00000010115rab239982.203ENSMMUG00000018003RAB239982.203Macaca_mulatta
ENSORLG00000010115rab239982.203ENSMNEG00000037012RAB239982.203Macaca_nemestrina
ENSORLG00000010115rab239982.203ENSMLEG00000042429RAB239982.203Mandrillus_leucophaeus
ENSORLG00000010115rab2310091.667ENSMAMG00000015456rab2310091.667Mastacembelus_armatus
ENSORLG00000010115rab2310093.137ENSMZEG00005005441rab2310093.137Maylandia_zebra
ENSORLG00000010115rab239983.051ENSMGAG00000013882RAB239983.051Meleagris_gallopavo
ENSORLG00000010115rab239982.627ENSMICG00000014037RAB239982.627Microcebus_murinus
ENSORLG00000010115rab239981.356ENSMOCG00000000444Rab239981.356Microtus_ochrogaster
ENSORLG00000010115rab2310091.176ENSMMOG00000007703rab2310091.176Mola_mola
ENSORLG00000010115rab239980.932ENSMODG00000018720RAB239980.932Monodelphis_domestica
ENSORLG00000010115rab2310092.157ENSMALG00000002136rab2310092.157Monopterus_albus
ENSORLG00000010115rab239980.508MGP_CAROLIEiJ_G0014015Rab239980.508Mus_caroli
ENSORLG00000010115rab239980.085ENSMUSG00000004768Rab239980.085Mus_musculus
ENSORLG00000010115rab239979.661MGP_PahariEiJ_G0027261Rab239979.661Mus_pahari
ENSORLG00000010115rab239980.085MGP_SPRETEiJ_G0014820Rab239980.085Mus_spretus
ENSORLG00000010115rab239975.105ENSMPUG00000002642RAB239975.105Mustela_putorius_furo
ENSORLG00000010115rab239981.356ENSMLUG00000004058RAB239981.356Myotis_lucifugus
ENSORLG00000010115rab239981.356ENSNGAG00000018038Rab239981.356Nannospalax_galili
ENSORLG00000010115rab2310093.137ENSNBRG00000013691rab2310093.137Neolamprologus_brichardi
ENSORLG00000010115rab239982.203ENSNLEG00000027830RAB239982.203Nomascus_leucogenys
ENSORLG00000010115rab239980.085ENSODEG00000016056RAB239980.085Octodon_degus
ENSORLG00000010115rab2310091.949ENSONIG00000009749rab2310091.949Oreochromis_niloticus
ENSORLG00000010115rab239982.203ENSOANG00000001398RAB239982.203Ornithorhynchus_anatinus
ENSORLG00000010115rab239982.203ENSOCUG00000004816RAB239982.203Oryctolagus_cuniculus
ENSORLG00000010115rab23100100.000ENSORLG00020020220rab23100100.000Oryzias_latipes_hni
ENSORLG00000010115rab2310099.149ENSORLG00015004033rab2310099.149Oryzias_latipes_hsok
ENSORLG00000010115rab2310097.549ENSOMEG00000001706rab2310097.549Oryzias_melastigma
ENSORLG00000010115rab239981.356ENSOGAG00000005675RAB239981.356Otolemur_garnettii
ENSORLG00000010115rab239980.932ENSOARG00000005749RAB239980.932Ovis_aries
ENSORLG00000010115rab239981.780ENSPPAG00000010023RAB239981.780Pan_paniscus
ENSORLG00000010115rab239982.203ENSPPRG00000012453RAB239982.203Panthera_pardus
ENSORLG00000010115rab239982.627ENSPTIG00000009435RAB239982.627Panthera_tigris_altaica
ENSORLG00000010115rab239982.203ENSPTRG00000043341RAB239982.203Pan_troglodytes
ENSORLG00000010115rab239982.203ENSPANG00000017772RAB239982.203Papio_anubis
ENSORLG00000010115rab237892.500ENSPKIG00000024310rab239982.090Paramormyrops_kingsleyae
ENSORLG00000010115rab239982.627ENSPSIG00000015579RAB239982.627Pelodiscus_sinensis
ENSORLG00000010115rab2310088.725ENSPMGG00000008577rab2310088.725Periophthalmus_magnuspinnatus
ENSORLG00000010115rab239980.508ENSPEMG00000023271Rab239980.508Peromyscus_maniculatus_bairdii
ENSORLG00000010115rab2310066.383ENSPMAG00000006835-10066.383Petromyzon_marinus
ENSORLG00000010115rab239980.932ENSPCIG00000007267RAB239980.932Phascolarctos_cinereus
ENSORLG00000010115rab2310091.064ENSPFOG00000011493rab2310091.064Poecilia_formosa
ENSORLG00000010115rab2310090.686ENSPLAG00000011697rab2310090.686Poecilia_latipinna
ENSORLG00000010115rab2310090.686ENSPMEG00000017300rab2310090.686Poecilia_mexicana
ENSORLG00000010115rab2310090.686ENSPREG00000022509rab2310090.686Poecilia_reticulata
ENSORLG00000010115rab239982.203ENSPPYG00000016739RAB239982.203Pongo_abelii
ENSORLG00000010115rab239982.203ENSPCOG00000028471RAB239982.203Propithecus_coquereli
ENSORLG00000010115rab239974.153ENSPVAG00000017693RAB239974.153Pteropus_vampyrus
ENSORLG00000010115rab2310093.137ENSPNYG00000019639rab2310093.137Pundamilia_nyererei
ENSORLG00000010115rab2310086.893ENSPNAG00000024728rab2310086.893Pygocentrus_nattereri
ENSORLG00000010115rab239980.932ENSRNOG00000012629Rab239980.932Rattus_norvegicus
ENSORLG00000010115rab239977.593ENSRBIG00000030547RAB239977.593Rhinopithecus_bieti
ENSORLG00000010115rab239982.203ENSRROG00000035920RAB239982.203Rhinopithecus_roxellana
ENSORLG00000010115rab239981.356ENSSBOG00000033237RAB239981.356Saimiri_boliviensis_boliviensis
ENSORLG00000010115rab239980.932ENSSHAG00000006379RAB239980.932Sarcophilus_harrisii
ENSORLG00000010115rab2310087.864ENSSFOG00015012604rab2310087.864Scleropages_formosus
ENSORLG00000010115rab2310090.686ENSSMAG00000006341rab2310090.686Scophthalmus_maximus
ENSORLG00000010115rab2310092.157ENSSDUG00000023508rab2310092.157Seriola_dumerili
ENSORLG00000010115rab2310092.157ENSSLDG00000000287rab2310092.157Seriola_lalandi_dorsalis
ENSORLG00000010115rab239979.661ENSSARG00000013689RAB239979.661Sorex_araneus
ENSORLG00000010115rab239983.475ENSSPUG00000006274RAB239983.475Sphenodon_punctatus
ENSORLG00000010115rab2310092.157ENSSPAG00000010373rab2310092.157Stegastes_partitus
ENSORLG00000010115rab239982.927ENSSSCG00000029539RAB239982.927Sus_scrofa
ENSORLG00000010115rab239982.627ENSTGUG00000012794RAB239982.627Taeniopygia_guttata
ENSORLG00000010115rab2310091.176ENSTRUG00000015697rab2310091.176Takifugu_rubripes
ENSORLG00000010115rab2310090.638ENSTNIG00000016575rab2310090.638Tetraodon_nigroviridis
ENSORLG00000010115rab239982.627ENSUAMG00000013367RAB239982.627Ursus_americanus
ENSORLG00000010115rab239982.627ENSUMAG00000018629RAB239982.627Ursus_maritimus
ENSORLG00000010115rab239256.021ENSVPAG00000006805RAB2310062.827Vicugna_pacos
ENSORLG00000010115rab239983.051ENSVVUG00000008535RAB239983.051Vulpes_vulpes
ENSORLG00000010115rab2310078.571ENSXETG00000004449rab2310078.571Xenopus_tropicalis
ENSORLG00000010115rab2310090.213ENSXCOG00000011864rab2310090.213Xiphophorus_couchianus
ENSORLG00000010115rab2310090.638ENSXMAG00000009387rab2310090.638Xiphophorus_maculatus

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