EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000010257 (Gene tree)
Gene ID: 101162457
Gene Symbol: polr1d
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11445 bases
Position: chr10:26866385-26877829
Accession: 101162457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000027377	RNA_pol_L_2	PF13656.6	5.8e-30	1	1
ENSORLP00000012857	RNA_pol_L_2	PF13656.6	1.2e-29	1	1
ENSORLP00000027377	RNA_pol_L	PF01193.24	1.6e-12	1	1
ENSORLP00000012857	RNA_pol_L	PF01193.24	3.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012858	-	481	-	ENSORLP00000012857	153 (aa)	-	H2M356
ENSORLT00000040761	-	2795	XM_023959374	ENSORLP00000027377	114 (aa)	XP_023815142	UPI0009D948BE

Gene Model

Click here to download ENSORLG00000010257's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03020	RNA polymerase	KEGG
ola04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000010257	polr1d	91	31.731	ENSORLG00000029046	polr2j	72	31.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010257	polr1d	94	68.224	ENSG00000186184	POLR1D	92	68.224	Homo_sapiens
ENSORLG00000010257	polr1d	89	80.392	ENSAPOG00000021882	polr1d	100	80.189	Acanthochromis_polyacanthus
ENSORLG00000010257	polr1d	94	69.159	ENSAMEG00000019095	POLR1D	86	69.159	Ailuropoda_melanoleuca
ENSORLG00000010257	polr1d	100	81.739	ENSACIG00000013328	polr1d	100	81.739	Amphilophus_citrinellus
ENSORLG00000010257	polr1d	100	78.947	ENSAOCG00000018500	polr1d	100	78.947	Amphiprion_ocellaris
ENSORLG00000010257	polr1d	100	79.825	ENSAPEG00000009489	polr1d	100	79.825	Amphiprion_percula
ENSORLG00000010257	polr1d	100	82.456	ENSATEG00000019322	polr1d	100	82.456	Anabas_testudineus
ENSORLG00000010257	polr1d	95	67.593	ENSACAG00000015753	POLR1D	93	67.593	Anolis_carolinensis
ENSORLG00000010257	polr1d	94	68.224	ENSANAG00000024486	POLR1D	80	68.224	Aotus_nancymaae
ENSORLG00000010257	polr1d	100	82.456	ENSACLG00000023805	polr1d	100	82.456	Astatotilapia_calliptera
ENSORLG00000010257	polr1d	99	71.681	ENSAMXG00000036118	polr1d	98	71.681	Astyanax_mexicanus
ENSORLG00000010257	polr1d	94	70.093	ENSBTAG00000033252	-	80	70.093	Bos_taurus
ENSORLG00000010257	polr1d	94	70.093	ENSBTAG00000008642	POLR1D	80	70.093	Bos_taurus
ENSORLG00000010257	polr1d	81	36.170	WBGene00010230	rpac-19	65	36.170	Caenorhabditis_elegans
ENSORLG00000010257	polr1d	93	69.811	ENSCJAG00000044669	POLR1D	80	69.811	Callithrix_jacchus
ENSORLG00000010257	polr1d	93	69.811	ENSCAFG00000006755	POLR1D	80	69.811	Canis_familiaris
ENSORLG00000010257	polr1d	93	69.811	ENSCHIG00000021910	POLR1D	80	69.811	Capra_hircus
ENSORLG00000010257	polr1d	93	69.811	ENSTSYG00000026817	-	80	69.811	Carlito_syrichta
ENSORLG00000010257	polr1d	93	58.333	ENSTSYG00000034852	-	89	58.333	Carlito_syrichta
ENSORLG00000010257	polr1d	57	61.538	ENSCAPG00000006058	-	66	61.538	Cavia_aperea
ENSORLG00000010257	polr1d	58	60.606	ENSCPOG00000030450	-	67	60.606	Cavia_porcellus
ENSORLG00000010257	polr1d	94	68.224	ENSCCAG00000021349	-	80	68.224	Cebus_capucinus
ENSORLG00000010257	polr1d	94	53.271	ENSCCAG00000020191	-	78	53.271	Cebus_capucinus
ENSORLG00000010257	polr1d	94	68.224	ENSCATG00000030710	-	80	68.224	Cercocebus_atys
ENSORLG00000010257	polr1d	93	58.491	ENSCATG00000022900	-	79	58.491	Cercocebus_atys
ENSORLG00000010257	polr1d	94	70.093	ENSCLAG00000017623	POLR1D	86	70.093	Chinchilla_lanigera
ENSORLG00000010257	polr1d	89	70.297	ENSCPBG00000004719	POLR1D	99	72.000	Chrysemys_picta_bellii
ENSORLG00000010257	polr1d	94	68.224	ENSCANG00000028632	-	80	68.224	Colobus_angolensis_palliatus
ENSORLG00000010257	polr1d	93	67.925	ENSCANG00000037694	-	80	67.925	Colobus_angolensis_palliatus
ENSORLG00000010257	polr1d	94	69.159	ENSCGRG00001021251	Polr1d	80	69.159	Cricetulus_griseus_chok1gshd
ENSORLG00000010257	polr1d	94	69.159	ENSCGRG00000011639	Polr1d	80	69.159	Cricetulus_griseus_crigri
ENSORLG00000010257	polr1d	93	79.245	ENSCSEG00000018268	polr1d	100	75.214	Cynoglossus_semilaevis
ENSORLG00000010257	polr1d	100	84.211	ENSCVAG00000018527	polr1d	100	84.211	Cyprinodon_variegatus
ENSORLG00000010257	polr1d	91	71.154	ENSDARG00000037570	polr1d	93	71.154	Danio_rerio
ENSORLG00000010257	polr1d	98	64.286	ENSDNOG00000046247	-	84	64.286	Dasypus_novemcinctus
ENSORLG00000010257	polr1d	98	65.179	ENSDNOG00000043676	-	84	65.179	Dasypus_novemcinctus
ENSORLG00000010257	polr1d	91	71.154	ENSDORG00000029155	Polr1d	78	71.154	Dipodomys_ordii
ENSORLG00000010257	polr1d	75	48.235	FBgn0086447	l(2)37Cg	80	48.235	Drosophila_melanogaster
ENSORLG00000010257	polr1d	93	72.642	ENSETEG00000012797	POLR1D	85	72.642	Echinops_telfairi
ENSORLG00000010257	polr1d	82	62.366	ENSEBUG00000011748	polr1d	65	62.366	Eptatretus_burgeri
ENSORLG00000010257	polr1d	96	68.807	ENSEASG00005022487	POLR1D	84	68.807	Equus_asinus_asinus
ENSORLG00000010257	polr1d	93	69.811	ENSEEUG00000013144	POLR1D	85	69.811	Erinaceus_europaeus
ENSORLG00000010257	polr1d	97	75.893	ENSELUG00000005105	rpac2	98	75.893	Esox_lucius
ENSORLG00000010257	polr1d	93	69.811	ENSFCAG00000030162	POLR1D	80	69.811	Felis_catus
ENSORLG00000010257	polr1d	88	74.000	ENSFALG00000011463	POLR1D	99	74.000	Ficedula_albicollis
ENSORLG00000010257	polr1d	93	69.811	ENSFDAG00000004463	POLR1D	80	69.811	Fukomys_damarensis
ENSORLG00000010257	polr1d	100	85.088	ENSFHEG00000015410	polr1d	99	85.088	Fundulus_heteroclitus
ENSORLG00000010257	polr1d	61	65.217	ENSGALG00000007470	POLR1D	68	65.217	Gallus_gallus
ENSORLG00000010257	polr1d	100	84.211	ENSGAFG00000001693	polr1d	100	84.211	Gambusia_affinis
ENSORLG00000010257	polr1d	96	81.651	ENSGACG00000018585	polr1d	92	81.651	Gasterosteus_aculeatus
ENSORLG00000010257	polr1d	100	71.930	ENSGAGG00000008503	POLR1D	100	71.930	Gopherus_agassizii
ENSORLG00000010257	polr1d	94	68.224	ENSGGOG00000004235	POLR1D	80	68.224	Gorilla_gorilla
ENSORLG00000010257	polr1d	100	82.456	ENSHBUG00000002111	polr1d	100	82.456	Haplochromis_burtoni
ENSORLG00000010257	polr1d	93	68.868	ENSHGLG00000003202	POLR1D	80	68.868	Heterocephalus_glaber_female
ENSORLG00000010257	polr1d	93	68.868	ENSHGLG00100009393	POLR1D	80	68.868	Heterocephalus_glaber_male
ENSORLG00000010257	polr1d	100	74.561	ENSHCOG00000003258	polr1d	100	74.561	Hippocampus_comes
ENSORLG00000010257	polr1d	100	73.043	ENSIPUG00000014810	polr1d	100	73.043	Ictalurus_punctatus
ENSORLG00000010257	polr1d	94	68.224	ENSSTOG00000013877	POLR1D	80	68.224	Ictidomys_tridecemlineatus
ENSORLG00000010257	polr1d	94	68.224	ENSJJAG00000022671	-	89	68.224	Jaculus_jaculus
ENSORLG00000010257	polr1d	94	53.271	ENSJJAG00000021667	-	63	53.271	Jaculus_jaculus
ENSORLG00000010257	polr1d	100	84.211	ENSKMAG00000015256	polr1d	100	84.211	Kryptolebias_marmoratus
ENSORLG00000010257	polr1d	100	81.579	ENSLBEG00000015919	polr1d	100	81.579	Labrus_bergylta
ENSORLG00000010257	polr1d	96	69.725	ENSLACG00000006810	POLR1D	90	69.725	Latimeria_chalumnae
ENSORLG00000010257	polr1d	62	77.465	ENSLOCG00000014976	polr1d	96	77.465	Lepisosteus_oculatus
ENSORLG00000010257	polr1d	95	67.593	ENSLAFG00000032290	POLR1D	81	67.593	Loxodonta_africana
ENSORLG00000010257	polr1d	94	68.224	ENSMFAG00000045264	POLR1D	83	68.224	Macaca_fascicularis
ENSORLG00000010257	polr1d	71	66.667	ENSMMUG00000041570	-	73	66.667	Macaca_mulatta
ENSORLG00000010257	polr1d	94	68.224	ENSMMUG00000020386	POLR1D	92	68.224	Macaca_mulatta
ENSORLG00000010257	polr1d	94	68.224	ENSMNEG00000008630	-	80	68.224	Macaca_nemestrina
ENSORLG00000010257	polr1d	87	55.556	ENSMNEG00000038120	-	88	52.830	Macaca_nemestrina
ENSORLG00000010257	polr1d	94	68.224	ENSMLEG00000041048	-	80	68.224	Mandrillus_leucophaeus
ENSORLG00000010257	polr1d	93	59.434	ENSMLEG00000032251	-	79	59.434	Mandrillus_leucophaeus
ENSORLG00000010257	polr1d	89	83.333	ENSMAMG00000014834	polr1d	94	85.149	Mastacembelus_armatus
ENSORLG00000010257	polr1d	89	81.373	ENSMZEG00005006638	polr1d	89	83.168	Maylandia_zebra
ENSORLG00000010257	polr1d	81	76.087	ENSMGAG00000005322	POLR1D	83	78.889	Meleagris_gallopavo
ENSORLG00000010257	polr1d	94	69.159	ENSMAUG00000001946	Polr1d	80	69.159	Mesocricetus_auratus
ENSORLG00000010257	polr1d	92	54.286	ENSMICG00000007349	-	78	54.286	Microcebus_murinus
ENSORLG00000010257	polr1d	94	68.224	ENSMICG00000016883	-	80	68.224	Microcebus_murinus
ENSORLG00000010257	polr1d	94	68.224	ENSMOCG00000021288	Polr1d	80	68.224	Microtus_ochrogaster
ENSORLG00000010257	polr1d	100	84.211	ENSMMOG00000009605	polr1d	100	84.211	Mola_mola
ENSORLG00000010257	polr1d	100	69.298	ENSMODG00000023881	POLR1D	100	69.298	Monodelphis_domestica
ENSORLG00000010257	polr1d	100	77.193	ENSMALG00000010652	polr1d	100	77.193	Monopterus_albus
ENSORLG00000010257	polr1d	91	69.231	MGP_CAROLIEiJ_G0028034	Polr1d	78	69.231	Mus_caroli
ENSORLG00000010257	polr1d	94	67.290	ENSMUSG00000029642	Polr1d	80	67.290	Mus_musculus
ENSORLG00000010257	polr1d	94	67.290	MGP_PahariEiJ_G0024600	Polr1d	80	67.290	Mus_pahari
ENSORLG00000010257	polr1d	98	64.286	MGP_SPRETEiJ_G0029032	Polr1d	84	64.286	Mus_spretus
ENSORLG00000010257	polr1d	94	68.224	ENSMLUG00000027169	-	80	68.224	Myotis_lucifugus
ENSORLG00000010257	polr1d	94	65.421	ENSMLUG00000004118	-	80	65.421	Myotis_lucifugus
ENSORLG00000010257	polr1d	95	69.444	ENSNGAG00000006014	Polr1d	93	69.444	Nannospalax_galili
ENSORLG00000010257	polr1d	100	82.456	ENSNBRG00000020327	polr1d	100	82.456	Neolamprologus_brichardi
ENSORLG00000010257	polr1d	94	68.224	ENSNLEG00000000358	POLR1D	80	68.224	Nomascus_leucogenys
ENSORLG00000010257	polr1d	93	60.377	ENSODEG00000014801	-	77	60.377	Octodon_degus
ENSORLG00000010257	polr1d	93	70.755	ENSODEG00000005294	-	80	70.755	Octodon_degus
ENSORLG00000010257	polr1d	93	73.585	ENSOANG00000008708	-	98	73.585	Ornithorhynchus_anatinus
ENSORLG00000010257	polr1d	94	68.224	ENSOCUG00000015706	POLR1D	66	68.224	Oryctolagus_cuniculus
ENSORLG00000010257	polr1d	100	100.000	ENSORLG00020000533	polr1d	77	100.000	Oryzias_latipes_hni
ENSORLG00000010257	polr1d	100	99.123	ENSORLG00015013267	polr1d	75	99.123	Oryzias_latipes_hsok
ENSORLG00000010257	polr1d	100	93.860	ENSOMEG00000014912	polr1d	76	93.860	Oryzias_melastigma
ENSORLG00000010257	polr1d	98	66.964	ENSOGAG00000014601	POLR1D	84	66.964	Otolemur_garnettii
ENSORLG00000010257	polr1d	94	69.159	ENSOARG00000017005	POLR1D	82	69.159	Ovis_aries
ENSORLG00000010257	polr1d	98	66.071	ENSPPAG00000028138	POLR1D	84	66.071	Pan_paniscus
ENSORLG00000010257	polr1d	93	69.811	ENSPPRG00000003381	POLR1D	80	69.811	Panthera_pardus
ENSORLG00000010257	polr1d	94	69.159	ENSPTIG00000018137	POLR1D	80	69.159	Panthera_tigris_altaica
ENSORLG00000010257	polr1d	94	68.224	ENSPTRG00000005734	POLR1D	80	68.224	Pan_troglodytes
ENSORLG00000010257	polr1d	94	68.224	ENSPANG00000020259	-	80	68.224	Papio_anubis
ENSORLG00000010257	polr1d	93	59.434	ENSPANG00000035051	-	79	59.434	Papio_anubis
ENSORLG00000010257	polr1d	85	76.289	ENSPKIG00000021891	polr1d	98	57.724	Paramormyrops_kingsleyae
ENSORLG00000010257	polr1d	100	70.175	ENSPSIG00000011822	POLR1D	88	70.175	Pelodiscus_sinensis
ENSORLG00000010257	polr1d	100	68.421	ENSPMGG00000012998	POLR1D	84	68.421	Periophthalmus_magnuspinnatus
ENSORLG00000010257	polr1d	100	76.316	ENSPMGG00000010359	polr1d	99	76.316	Periophthalmus_magnuspinnatus
ENSORLG00000010257	polr1d	94	68.224	ENSPEMG00000006336	-	82	68.224	Peromyscus_maniculatus_bairdii
ENSORLG00000010257	polr1d	94	59.259	ENSPMAG00000004228	polr1d	91	59.259	Petromyzon_marinus
ENSORLG00000010257	polr1d	100	68.421	ENSPCIG00000001673	POLR1D	100	68.421	Phascolarctos_cinereus
ENSORLG00000010257	polr1d	100	85.088	ENSPFOG00000023343	polr1d	100	86.207	Poecilia_formosa
ENSORLG00000010257	polr1d	100	85.088	ENSPLAG00000009675	polr1d	100	85.088	Poecilia_latipinna
ENSORLG00000010257	polr1d	100	85.088	ENSPMEG00000004628	polr1d	100	85.088	Poecilia_mexicana
ENSORLG00000010257	polr1d	100	85.088	ENSPREG00000022032	polr1d	100	85.088	Poecilia_reticulata
ENSORLG00000010257	polr1d	94	67.290	ENSPCOG00000028175	POLR1D	80	67.290	Propithecus_coquereli
ENSORLG00000010257	polr1d	100	82.456	ENSPNYG00000000107	polr1d	100	82.456	Pundamilia_nyererei
ENSORLG00000010257	polr1d	96	69.725	ENSPNAG00000001512	polr1d	100	67.227	Pygocentrus_nattereri
ENSORLG00000010257	polr1d	94	68.224	ENSRBIG00000036378	-	80	68.224	Rhinopithecus_bieti
ENSORLG00000010257	polr1d	93	66.038	ENSRBIG00000000336	-	80	66.038	Rhinopithecus_bieti
ENSORLG00000010257	polr1d	93	66.981	ENSRROG00000026751	-	80	66.981	Rhinopithecus_roxellana
ENSORLG00000010257	polr1d	94	68.224	ENSRROG00000042232	-	80	68.224	Rhinopithecus_roxellana
ENSORLG00000010257	polr1d	79	53.333	YNL113W	RPC19	76	50.459	Saccharomyces_cerevisiae
ENSORLG00000010257	polr1d	94	68.224	ENSSBOG00000028482	-	80	68.224	Saimiri_boliviensis_boliviensis
ENSORLG00000010257	polr1d	87	66.667	ENSSBOG00000030146	-	79	62.617	Saimiri_boliviensis_boliviensis
ENSORLG00000010257	polr1d	96	67.273	ENSSHAG00000001190	POLR1D	85	67.273	Sarcophilus_harrisii
ENSORLG00000010257	polr1d	96	75.455	ENSSFOG00015011375	polr1d	96	75.455	Scleropages_formosus
ENSORLG00000010257	polr1d	100	83.333	ENSSMAG00000011861	polr1d	100	83.333	Scophthalmus_maximus
ENSORLG00000010257	polr1d	100	82.456	ENSSDUG00000011930	polr1d	100	82.456	Seriola_dumerili
ENSORLG00000010257	polr1d	92	79.048	ENSSLDG00000023871	polr1d	93	80.000	Seriola_lalandi_dorsalis
ENSORLG00000010257	polr1d	94	69.159	ENSSARG00000007840	POLR1D	80	69.159	Sorex_araneus
ENSORLG00000010257	polr1d	91	74.038	ENSSPUG00000005786	POLR1D	89	74.038	Sphenodon_punctatus
ENSORLG00000010257	polr1d	100	83.333	ENSSPAG00000011764	polr1d	100	83.333	Stegastes_partitus
ENSORLG00000010257	polr1d	92	69.524	ENSSSCG00000009310	POLR1D	79	69.524	Sus_scrofa
ENSORLG00000010257	polr1d	84	72.917	ENSTGUG00000005450	POLR1D	100	72.917	Taeniopygia_guttata
ENSORLG00000010257	polr1d	100	79.825	ENSTRUG00000019741	polr1d	100	79.825	Takifugu_rubripes
ENSORLG00000010257	polr1d	98	66.071	ENSTBEG00000007006	POLR1D	90	66.071	Tupaia_belangeri
ENSORLG00000010257	polr1d	93	69.811	ENSUAMG00000011413	POLR1D	80	69.811	Ursus_americanus
ENSORLG00000010257	polr1d	94	69.159	ENSUMAG00000016968	POLR1D	84	69.159	Ursus_maritimus
ENSORLG00000010257	polr1d	93	69.811	ENSVVUG00000009216	POLR1D	80	69.811	Vulpes_vulpes
ENSORLG00000010257	polr1d	89	87.129	ENSXCOG00000011731	polr1d	85	83.636	Xiphophorus_couchianus
ENSORLG00000010257	polr1d	89	86.139	ENSXMAG00000017538	polr1d	85	82.727	Xiphophorus_maculatus