EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000010330 (Gene tree)
Gene ID: 101159943
Gene Symbol: prpf3
Alias: -
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 9348 bases
Position: chr16:18948068-18957415
Accession: 101159943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000026631	PRP3	PF08572.10	1e-76	1	1
ENSORLP00000039897	PRP3	PF08572.10	1e-76	1	1
ENSORLP00000012942	PRP3	PF08572.10	1.1e-76	1	1
ENSORLP00000026631	PWI	PF01480.17	4.1e-12	1	1
ENSORLP00000039897	PWI	PF01480.17	4.1e-12	1	1
ENSORLP00000012942	PWI	PF01480.17	4.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035172	-	3077	-	ENSORLP00000039897	656 (aa)	-	-
ENSORLT00000012943	-	2988	XM_011485324	ENSORLP00000012942	692 (aa)	XP_011483626	H2M3E0
ENSORLT00000039575	-	3460	-	ENSORLP00000026631	656 (aa)	-	-

Gene Model

Click here to download ENSORLG00000010330's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010330	prpf3	99	71.755	ENSG00000117360	PRPF3	100	72.650	Homo_sapiens
ENSORLG00000010330	prpf3	100	86.246	ENSAPOG00000015584	prpf3	100	87.249	Acanthochromis_polyacanthus
ENSORLG00000010330	prpf3	99	71.897	ENSAMEG00000001630	PRPF3	100	72.792	Ailuropoda_melanoleuca
ENSORLG00000010330	prpf3	100	85.206	ENSACIG00000007876	prpf3	100	85.491	Amphilophus_citrinellus
ENSORLG00000010330	prpf3	100	85.530	ENSAOCG00000011449	prpf3	100	86.819	Amphiprion_ocellaris
ENSORLG00000010330	prpf3	100	86.819	ENSATEG00000023583	prpf3	100	87.249	Anabas_testudineus
ENSORLG00000010330	prpf3	99	73.219	ENSAPLG00000002440	PRPF3	100	73.219	Anas_platyrhynchos
ENSORLG00000010330	prpf3	99	71.755	ENSACAG00000003176	PRPF3	100	72.624	Anolis_carolinensis
ENSORLG00000010330	prpf3	99	71.755	ENSANAG00000026138	PRPF3	100	72.650	Aotus_nancymaae
ENSORLG00000010330	prpf3	100	85.265	ENSACLG00000020127	prpf3	100	85.694	Astatotilapia_calliptera
ENSORLG00000010330	prpf3	100	80.112	ENSAMXG00000007306	prpf3	100	80.112	Astyanax_mexicanus
ENSORLG00000010330	prpf3	99	71.755	ENSBTAG00000013946	PRPF3	100	72.650	Bos_taurus
ENSORLG00000010330	prpf3	81	39.261	WBGene00010844	prp-3	96	36.632	Caenorhabditis_elegans
ENSORLG00000010330	prpf3	99	71.755	ENSCJAG00000009926	PRPF3	100	72.650	Callithrix_jacchus
ENSORLG00000010330	prpf3	99	71.755	ENSCAFG00000011820	PRPF3	100	72.650	Canis_familiaris
ENSORLG00000010330	prpf3	85	71.908	ENSCAFG00020019653	PRPF3	100	72.438	Canis_lupus_dingo
ENSORLG00000010330	prpf3	99	71.755	ENSCHIG00000015434	PRPF3	100	72.650	Capra_hircus
ENSORLG00000010330	prpf3	99	71.937	ENSTSYG00000001383	PRPF3	100	72.792	Carlito_syrichta
ENSORLG00000010330	prpf3	93	62.154	ENSCAPG00000017812	PRPF3	95	62.923	Cavia_aperea
ENSORLG00000010330	prpf3	99	71.795	ENSCPOG00000008068	PRPF3	100	72.650	Cavia_porcellus
ENSORLG00000010330	prpf3	99	71.755	ENSCCAG00000026380	PRPF3	100	72.650	Cebus_capucinus
ENSORLG00000010330	prpf3	99	59.065	ENSCATG00000041778	PRPF3	100	59.915	Cercocebus_atys
ENSORLG00000010330	prpf3	99	71.897	ENSCLAG00000015009	PRPF3	100	72.792	Chinchilla_lanigera
ENSORLG00000010330	prpf3	76	80.292	ENSCHOG00000011645	PRPF3	76	81.387	Choloepus_hoffmanni
ENSORLG00000010330	prpf3	99	72.222	ENSCPBG00000008216	PRPF3	100	73.077	Chrysemys_picta_bellii
ENSORLG00000010330	prpf3	60	58.852	ENSCING00000003312	-	99	58.852	Ciona_intestinalis
ENSORLG00000010330	prpf3	82	51.042	ENSCSAVG00000008720	-	96	51.042	Ciona_savignyi
ENSORLG00000010330	prpf3	99	71.225	ENSCANG00000036769	PRPF3	100	72.080	Colobus_angolensis_palliatus
ENSORLG00000010330	prpf3	99	71.755	ENSCGRG00001019100	Prpf3	100	72.650	Cricetulus_griseus_chok1gshd
ENSORLG00000010330	prpf3	99	71.755	ENSCGRG00000007322	Prpf3	100	72.650	Cricetulus_griseus_crigri
ENSORLG00000010330	prpf3	100	83.994	ENSCSEG00000002532	prpf3	100	83.994	Cynoglossus_semilaevis
ENSORLG00000010330	prpf3	100	86.494	ENSCVAG00000009318	prpf3	100	86.925	Cyprinodon_variegatus
ENSORLG00000010330	prpf3	100	79.943	ENSDARG00000086425	prpf3	100	79.943	Danio_rerio
ENSORLG00000010330	prpf3	99	65.805	ENSDNOG00000005904	PRPF3	100	66.904	Dasypus_novemcinctus
ENSORLG00000010330	prpf3	93	71.626	ENSDORG00000008664	Prpf3	99	72.699	Dipodomys_ordii
ENSORLG00000010330	prpf3	80	53.229	FBgn0036915	Prp3	99	53.559	Drosophila_melanogaster
ENSORLG00000010330	prpf3	99	71.041	ENSETEG00000019124	PRPF3	100	71.937	Echinops_telfairi
ENSORLG00000010330	prpf3	100	61.364	ENSEBUG00000011680	prpf3	100	61.898	Eptatretus_burgeri
ENSORLG00000010330	prpf3	99	71.612	ENSEASG00005001566	PRPF3	100	72.507	Equus_asinus_asinus
ENSORLG00000010330	prpf3	99	71.755	ENSECAG00000019840	PRPF3	100	72.650	Equus_caballus
ENSORLG00000010330	prpf3	84	71.655	ENSEEUG00000007338	PRPF3	85	72.460	Erinaceus_europaeus
ENSORLG00000010330	prpf3	100	74.148	ENSELUG00000013624	prpf3	100	74.468	Esox_lucius
ENSORLG00000010330	prpf3	99	71.755	ENSFCAG00000013940	PRPF3	100	72.650	Felis_catus
ENSORLG00000010330	prpf3	99	71.897	ENSFDAG00000010365	PRPF3	100	72.792	Fukomys_damarensis
ENSORLG00000010330	prpf3	100	85.899	ENSFHEG00000021746	prpf3	100	86.331	Fundulus_heteroclitus
ENSORLG00000010330	prpf3	100	81.508	ENSGMOG00000008535	prpf3	100	81.508	Gadus_morhua
ENSORLG00000010330	prpf3	99	73.362	ENSGALG00000028205	PRPF3	100	73.362	Gallus_gallus
ENSORLG00000010330	prpf3	100	85.755	ENSGAFG00000012671	prpf3	100	86.187	Gambusia_affinis
ENSORLG00000010330	prpf3	100	84.615	ENSGACG00000011792	prpf3	100	85.043	Gasterosteus_aculeatus
ENSORLG00000010330	prpf3	99	72.222	ENSGAGG00000013765	PRPF3	100	74.776	Gopherus_agassizii
ENSORLG00000010330	prpf3	86	75.811	ENSGGOG00000013174	PRPF3	100	76.833	Gorilla_gorilla
ENSORLG00000010330	prpf3	100	85.551	ENSHBUG00000003493	prpf3	100	85.980	Haplochromis_burtoni
ENSORLG00000010330	prpf3	99	52.068	ENSHGLG00000016033	-	96	65.455	Heterocephalus_glaber_female
ENSORLG00000010330	prpf3	99	71.612	ENSHGLG00000016569	PRPF3	100	72.507	Heterocephalus_glaber_female
ENSORLG00000010330	prpf3	90	65.455	ENSHGLG00100008951	-	96	65.455	Heterocephalus_glaber_male
ENSORLG00000010330	prpf3	99	71.612	ENSHGLG00100007590	PRPF3	100	72.507	Heterocephalus_glaber_male
ENSORLG00000010330	prpf3	100	81.571	ENSHCOG00000014058	prpf3	100	82.286	Hippocampus_comes
ENSORLG00000010330	prpf3	100	79.630	ENSIPUG00000000902	PRPF3	100	79.772	Ictalurus_punctatus
ENSORLG00000010330	prpf3	99	71.755	ENSSTOG00000001889	PRPF3	100	72.650	Ictidomys_tridecemlineatus
ENSORLG00000010330	prpf3	100	85.980	ENSKMAG00000001390	prpf3	100	86.695	Kryptolebias_marmoratus
ENSORLG00000010330	prpf3	100	86.895	ENSLBEG00000026310	prpf3	100	87.749	Labrus_bergylta
ENSORLG00000010330	prpf3	98	68.300	ENSLACG00000010541	PRPF3	100	68.760	Latimeria_chalumnae
ENSORLG00000010330	prpf3	99	71.755	ENSLAFG00000004713	PRPF3	100	72.650	Loxodonta_africana
ENSORLG00000010330	prpf3	99	71.755	ENSMFAG00000039791	PRPF3	100	72.650	Macaca_fascicularis
ENSORLG00000010330	prpf3	95	72.568	ENSMMUG00000016301	PRPF3	97	73.089	Macaca_mulatta
ENSORLG00000010330	prpf3	99	71.755	ENSMNEG00000038161	PRPF3	100	72.650	Macaca_nemestrina
ENSORLG00000010330	prpf3	86	75.811	ENSMLEG00000040609	PRPF3	100	76.833	Mandrillus_leucophaeus
ENSORLG00000010330	prpf3	98	49.353	ENSMLEG00000041065	-	97	48.921	Mandrillus_leucophaeus
ENSORLG00000010330	prpf3	100	86.752	ENSMAMG00000014968	prpf3	100	86.752	Mastacembelus_armatus
ENSORLG00000010330	prpf3	100	86.913	ENSMZEG00005015970	prpf3	100	87.340	Maylandia_zebra
ENSORLG00000010330	prpf3	99	73.362	ENSMGAG00000000707	PRPF3	100	73.362	Meleagris_gallopavo
ENSORLG00000010330	prpf3	99	71.755	ENSMAUG00000017112	Prpf3	100	72.650	Mesocricetus_auratus
ENSORLG00000010330	prpf3	99	71.612	ENSMICG00000015386	PRPF3	100	74.510	Microcebus_murinus
ENSORLG00000010330	prpf3	99	71.755	ENSMOCG00000000242	Prpf3	100	72.650	Microtus_ochrogaster
ENSORLG00000010330	prpf3	100	78.843	ENSMMOG00000016131	prpf3	100	79.408	Mola_mola
ENSORLG00000010330	prpf3	99	72.262	ENSMODG00000018774	PRPF3	100	73.115	Monodelphis_domestica
ENSORLG00000010330	prpf3	100	83.571	ENSMALG00000007257	prpf3	100	83.571	Monopterus_albus
ENSORLG00000010330	prpf3	99	71.795	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.650	Mus_caroli
ENSORLG00000010330	prpf3	99	71.795	ENSMUSG00000015748	Prpf3	100	72.650	Mus_musculus
ENSORLG00000010330	prpf3	99	71.879	MGP_PahariEiJ_G0026798	Prpf3	100	72.740	Mus_pahari
ENSORLG00000010330	prpf3	99	71.795	MGP_SPRETEiJ_G0026298	Prpf3	100	72.650	Mus_spretus
ENSORLG00000010330	prpf3	99	70.228	ENSMPUG00000005080	PRPF3	100	71.225	Mustela_putorius_furo
ENSORLG00000010330	prpf3	99	71.795	ENSMLUG00000004646	-	100	72.688	Myotis_lucifugus
ENSORLG00000010330	prpf3	99	71.755	ENSNGAG00000000910	Prpf3	100	72.650	Nannospalax_galili
ENSORLG00000010330	prpf3	100	85.935	ENSNBRG00000003462	prpf3	100	86.357	Neolamprologus_brichardi
ENSORLG00000010330	prpf3	95	72.611	ENSNLEG00000009841	PRPF3	99	73.089	Nomascus_leucogenys
ENSORLG00000010330	prpf3	83	64.344	ENSMEUG00000008733	PRPF3	89	65.574	Notamacropus_eugenii
ENSORLG00000010330	prpf3	99	71.755	ENSOPRG00000010139	PRPF3	100	72.650	Ochotona_princeps
ENSORLG00000010330	prpf3	99	72.080	ENSODEG00000011363	-	100	72.934	Octodon_degus
ENSORLG00000010330	prpf3	99	54.468	ENSODEG00000014412	-	100	55.177	Octodon_degus
ENSORLG00000010330	prpf3	100	87.055	ENSONIG00000006394	prpf3	100	87.482	Oreochromis_niloticus
ENSORLG00000010330	prpf3	99	55.461	ENSOANG00000015441	PRPF3	100	55.461	Ornithorhynchus_anatinus
ENSORLG00000010330	prpf3	99	71.755	ENSOCUG00000011760	PRPF3	100	72.650	Oryctolagus_cuniculus
ENSORLG00000010330	prpf3	100	99.855	ENSORLG00020009054	prpf3	100	99.855	Oryzias_latipes_hni
ENSORLG00000010330	prpf3	100	99.422	ENSORLG00015015016	prpf3	100	99.422	Oryzias_latipes_hsok
ENSORLG00000010330	prpf3	100	96.110	ENSOMEG00000000940	prpf3	100	96.110	Oryzias_melastigma
ENSORLG00000010330	prpf3	99	68.234	ENSOGAG00000005352	PRPF3	100	69.132	Otolemur_garnettii
ENSORLG00000010330	prpf3	99	71.755	ENSOARG00000020798	PRPF3	100	72.650	Ovis_aries
ENSORLG00000010330	prpf3	99	71.612	ENSPPAG00000030983	PRPF3	100	72.507	Pan_paniscus
ENSORLG00000010330	prpf3	98	56.041	ENSPPAG00000043769	-	99	55.959	Pan_paniscus
ENSORLG00000010330	prpf3	99	71.755	ENSPPRG00000000731	PRPF3	100	72.650	Panthera_pardus
ENSORLG00000010330	prpf3	99	71.755	ENSPTIG00000005516	PRPF3	100	72.650	Panthera_tigris_altaica
ENSORLG00000010330	prpf3	99	71.755	ENSPTRG00000001254	PRPF3	100	72.650	Pan_troglodytes
ENSORLG00000010330	prpf3	98	55.167	ENSPTRG00000047819	-	99	55.087	Pan_troglodytes
ENSORLG00000010330	prpf3	99	71.612	ENSPANG00000000499	PRPF3	100	72.507	Papio_anubis
ENSORLG00000010330	prpf3	100	80.966	ENSPKIG00000010501	prpf3	100	80.966	Paramormyrops_kingsleyae
ENSORLG00000010330	prpf3	99	72.404	ENSPSIG00000014877	PRPF3	100	72.831	Pelodiscus_sinensis
ENSORLG00000010330	prpf3	100	75.902	ENSPMGG00000007776	prpf3	100	75.902	Periophthalmus_magnuspinnatus
ENSORLG00000010330	prpf3	99	71.755	ENSPEMG00000011672	Prpf3	100	72.650	Peromyscus_maniculatus_bairdii
ENSORLG00000010330	prpf3	62	70.709	ENSPMAG00000005588	prpf3	97	70.709	Petromyzon_marinus
ENSORLG00000010330	prpf3	99	72.262	ENSPCIG00000008795	PRPF3	100	73.115	Phascolarctos_cinereus
ENSORLG00000010330	prpf3	100	84.758	ENSPFOG00000013638	prpf3	100	85.470	Poecilia_formosa
ENSORLG00000010330	prpf3	100	85.324	ENSPLAG00000018103	prpf3	100	86.043	Poecilia_latipinna
ENSORLG00000010330	prpf3	100	85.180	ENSPMEG00000023546	prpf3	100	85.899	Poecilia_mexicana
ENSORLG00000010330	prpf3	100	86.043	ENSPREG00000017216	prpf3	100	86.475	Poecilia_reticulata
ENSORLG00000010330	prpf3	98	70.732	ENSPPYG00000000900	PRPF3	99	71.865	Pongo_abelii
ENSORLG00000010330	prpf3	80	63.465	ENSPPYG00000018646	-	99	64.098	Pongo_abelii
ENSORLG00000010330	prpf3	87	72.623	ENSPCAG00000014908	PRPF3	87	73.693	Procavia_capensis
ENSORLG00000010330	prpf3	99	71.612	ENSPCOG00000013828	PRPF3	100	72.507	Propithecus_coquereli
ENSORLG00000010330	prpf3	99	71.368	ENSPVAG00000013472	PRPF3	100	72.222	Pteropus_vampyrus
ENSORLG00000010330	prpf3	100	85.935	ENSPNYG00000004279	prpf3	100	86.357	Pundamilia_nyererei
ENSORLG00000010330	prpf3	100	80.056	ENSPNAG00000001799	prpf3	100	80.056	Pygocentrus_nattereri
ENSORLG00000010330	prpf3	99	71.937	ENSRNOG00000025629	Prpf3	100	72.792	Rattus_norvegicus
ENSORLG00000010330	prpf3	83	68.794	ENSRBIG00000028854	PRPF3	98	70.922	Rhinopithecus_bieti
ENSORLG00000010330	prpf3	99	71.755	ENSRROG00000027464	PRPF3	100	72.650	Rhinopithecus_roxellana
ENSORLG00000010330	prpf3	99	65.242	ENSSBOG00000033104	PRPF3	100	66.097	Saimiri_boliviensis_boliviensis
ENSORLG00000010330	prpf3	99	71.875	ENSSHAG00000009548	PRPF3	100	72.727	Sarcophilus_harrisii
ENSORLG00000010330	prpf3	100	80.505	ENSSFOG00015022014	prpf3	100	80.505	Scleropages_formosus
ENSORLG00000010330	prpf3	100	85.493	ENSSMAG00000015739	prpf3	100	85.915	Scophthalmus_maximus
ENSORLG00000010330	prpf3	100	83.261	ENSSDUG00000006840	prpf3	100	83.405	Seriola_dumerili
ENSORLG00000010330	prpf3	100	84.669	ENSSLDG00000015423	prpf3	100	85.654	Seriola_lalandi_dorsalis
ENSORLG00000010330	prpf3	99	71.755	ENSSARG00000011064	PRPF3	100	72.650	Sorex_araneus
ENSORLG00000010330	prpf3	99	71.910	ENSSPUG00000000809	PRPF3	100	72.331	Sphenodon_punctatus
ENSORLG00000010330	prpf3	100	86.591	ENSSPAG00000018721	prpf3	100	87.874	Stegastes_partitus
ENSORLG00000010330	prpf3	99	71.755	ENSSSCG00000030119	PRPF3	100	74.688	Sus_scrofa
ENSORLG00000010330	prpf3	99	62.197	ENSTGUG00000004552	PRPF3	100	62.197	Taeniopygia_guttata
ENSORLG00000010330	prpf3	100	82.040	ENSTRUG00000014923	prpf3	100	82.471	Takifugu_rubripes
ENSORLG00000010330	prpf3	99	82.955	ENSTNIG00000008058	prpf3	100	82.955	Tetraodon_nigroviridis
ENSORLG00000010330	prpf3	81	71.202	ENSTBEG00000014072	PRPF3	88	73.243	Tupaia_belangeri
ENSORLG00000010330	prpf3	99	66.904	ENSTTRG00000010616	PRPF3	100	67.760	Tursiops_truncatus
ENSORLG00000010330	prpf3	79	74.061	ENSUAMG00000009345	PRPF3	100	74.688	Ursus_americanus
ENSORLG00000010330	prpf3	99	71.755	ENSUMAG00000003720	PRPF3	100	72.650	Ursus_maritimus
ENSORLG00000010330	prpf3	88	76.417	ENSVPAG00000005425	PRPF3	89	77.098	Vicugna_pacos
ENSORLG00000010330	prpf3	99	71.857	ENSVVUG00000007933	PRPF3	100	72.650	Vulpes_vulpes
ENSORLG00000010330	prpf3	99	69.504	ENSXETG00000018654	prpf3	100	70.496	Xenopus_tropicalis
ENSORLG00000010330	prpf3	100	85.468	ENSXMAG00000016347	prpf3	100	86.187	Xiphophorus_maculatus