EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000010391 (Gene tree)
Gene ID: 101157805
Gene Symbol: -
Alias: -
Full Name: threonine--tRNA ligase%2C cytoplasmic
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 9844 bases
Position: chr16:18981886-18991729
Accession: 101157805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013022	HGTP_anticodon	PF03129.20	2.1e-16	1	1
ENSORLP00000026008	HGTP_anticodon	PF03129.20	3.6e-07	1	1
ENSORLP00000026008	tRNA-synt_2b	PF00587.25	3.7e-36	1	1
ENSORLP00000013022	tRNA-synt_2b	PF00587.25	4.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040837	-	3097	-	ENSORLP00000026008	668 (aa)	-	-
ENSORLT00000013023	-	3054	XM_004078157	ENSORLP00000013022	698 (aa)	XP_004078205	H2M3L7

Gene Model

Click here to download ENSORLG00000010391's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000010391	-	94	52.259	ENSORLG00000001603	tars	91	52.259
ENSORLG00000010391	-	93	53.474	ENSORLG00000014313	tarsl2	85	53.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010391	-	94	52.030	ENSG00000185418	TARSL2	99	45.205	Homo_sapiens
ENSORLG00000010391	-	61	78.588	ENSAPOG00000015706	-	100	78.588	Acanthochromis_polyacanthus
ENSORLG00000010391	-	93	52.417	ENSAMEG00000003074	TARSL2	85	52.187	Ailuropoda_melanoleuca
ENSORLG00000010391	-	63	88.009	ENSACIG00000007759	-	95	88.009	Amphilophus_citrinellus
ENSORLG00000010391	-	61	83.879	ENSAOCG00000012359	-	99	83.879	Amphiprion_ocellaris
ENSORLG00000010391	-	61	80.000	ENSAPEG00000007512	-	100	80.000	Amphiprion_percula
ENSORLG00000010391	-	100	80.830	ENSATEG00000023568	-	100	80.830	Anabas_testudineus
ENSORLG00000010391	-	93	53.485	ENSAPLG00000008485	TARSL2	92	53.485	Anas_platyrhynchos
ENSORLG00000010391	-	94	53.233	ENSACAG00000003076	-	98	53.233	Anolis_carolinensis
ENSORLG00000010391	-	93	40.639	ENSACAG00000000199	TARSL2	71	64.103	Anolis_carolinensis
ENSORLG00000010391	-	95	48.886	ENSANAG00000020687	TARSL2	85	49.762	Aotus_nancymaae
ENSORLG00000010391	-	100	81.339	ENSACLG00000020262	-	100	81.339	Astatotilapia_calliptera
ENSORLG00000010391	-	95	70.890	ENSAMXG00000012533	-	96	70.890	Astyanax_mexicanus
ENSORLG00000010391	-	94	51.128	ENSBTAG00000007651	TARSL2	83	51.128	Bos_taurus
ENSORLG00000010391	-	91	68.153	ENSCJAG00000017350	TARSL2	71	68.456	Callithrix_jacchus
ENSORLG00000010391	-	93	51.657	ENSCAFG00000010453	TARSL2	83	51.657	Canis_familiaris
ENSORLG00000010391	-	95	50.659	ENSCAFG00020020868	TARSL2	97	54.319	Canis_lupus_dingo
ENSORLG00000010391	-	86	51.864	ENSCHIG00000015264	TARSL2	81	51.864	Capra_hircus
ENSORLG00000010391	-	94	50.977	ENSTSYG00000004538	TARSL2	94	50.977	Carlito_syrichta
ENSORLG00000010391	-	89	46.900	ENSCAPG00000004815	TARSL2	94	46.900	Cavia_aperea
ENSORLG00000010391	-	94	51.880	ENSCPOG00000008850	TARSL2	95	51.880	Cavia_porcellus
ENSORLG00000010391	-	95	51.994	ENSCCAG00000030068	TARSL2	82	53.071	Cebus_capucinus
ENSORLG00000010391	-	94	51.647	ENSCATG00000037383	TARSL2	86	51.570	Cercocebus_atys
ENSORLG00000010391	-	93	51.506	ENSCLAG00000016873	TARSL2	87	51.429	Chinchilla_lanigera
ENSORLG00000010391	-	94	51.647	ENSCSAG00000016828	TARSL2	83	51.570	Chlorocebus_sabaeus
ENSORLG00000010391	-	91	50.641	ENSCHOG00000001319	TARSL2	95	50.722	Choloepus_hoffmanni
ENSORLG00000010391	-	94	52.338	ENSCPBG00000010792	TARSL2	84	52.338	Chrysemys_picta_bellii
ENSORLG00000010391	-	94	51.796	ENSCANG00000035438	TARSL2	94	51.719	Colobus_angolensis_palliatus
ENSORLG00000010391	-	94	51.807	ENSCGRG00001020827	Tarsl2	84	51.807	Cricetulus_griseus_chok1gshd
ENSORLG00000010391	-	94	51.807	ENSCGRG00000011398	Tarsl2	93	51.807	Cricetulus_griseus_crigri
ENSORLG00000010391	-	99	76.327	ENSCSEG00000002562	-	99	84.977	Cynoglossus_semilaevis
ENSORLG00000010391	-	61	89.019	ENSCVAG00000009253	-	99	89.019	Cyprinodon_variegatus
ENSORLG00000010391	-	57	81.217	ENSDARG00000075385	LO017852.1	99	77.910	Danio_rerio
ENSORLG00000010391	-	96	49.706	ENSDNOG00000046161	TARSL2	97	49.706	Dasypus_novemcinctus
ENSORLG00000010391	-	93	51.964	ENSDORG00000009653	Tarsl2	94	52.115	Dipodomys_ordii
ENSORLG00000010391	-	94	51.579	ENSEASG00005017718	TARSL2	83	51.579	Equus_asinus_asinus
ENSORLG00000010391	-	93	51.657	ENSECAG00000024315	TARSL2	83	51.579	Equus_caballus
ENSORLG00000010391	-	85	54.500	ENSEEUG00000014117	TARSL2	98	54.500	Erinaceus_europaeus
ENSORLG00000010391	-	100	72.222	ENSELUG00000013552	-	100	72.222	Esox_lucius
ENSORLG00000010391	-	94	52.180	ENSFCAG00000008836	TARSL2	82	53.291	Felis_catus
ENSORLG00000010391	-	93	53.858	ENSFALG00000012444	TARSL2	89	53.858	Ficedula_albicollis
ENSORLG00000010391	-	93	50.530	ENSFDAG00000002767	TARSL2	94	50.453	Fukomys_damarensis
ENSORLG00000010391	-	63	87.585	ENSFHEG00000021877	-	81	87.585	Fundulus_heteroclitus
ENSORLG00000010391	-	95	74.775	ENSGMOG00000006184	-	96	74.775	Gadus_morhua
ENSORLG00000010391	-	94	52.853	ENSGALG00000043416	-	91	64.467	Gallus_gallus
ENSORLG00000010391	-	93	53.101	ENSGALG00000003985	TARSL2	84	53.101	Gallus_gallus
ENSORLG00000010391	-	100	78.398	ENSGAFG00000012691	-	100	78.398	Gambusia_affinis
ENSORLG00000010391	-	100	79.685	ENSGACG00000011734	-	100	79.685	Gasterosteus_aculeatus
ENSORLG00000010391	-	94	52.187	ENSGAGG00000010775	TARSL2	83	52.187	Gopherus_agassizii
ENSORLG00000010391	-	94	51.880	ENSGGOG00000007839	TARSL2	86	51.880	Gorilla_gorilla
ENSORLG00000010391	-	100	81.909	ENSHBUG00000003411	-	100	81.909	Haplochromis_burtoni
ENSORLG00000010391	-	93	51.735	ENSHGLG00000011618	TARSL2	84	51.657	Heterocephalus_glaber_female
ENSORLG00000010391	-	93	51.735	ENSHGLG00100016769	TARSL2	95	51.657	Heterocephalus_glaber_male
ENSORLG00000010391	-	100	73.247	ENSHCOG00000014119	-	99	73.247	Hippocampus_comes
ENSORLG00000010391	-	61	74.588	ENSIPUG00000000099	-	100	74.588	Ictalurus_punctatus
ENSORLG00000010391	-	94	52.180	ENSSTOG00000032725	TARSL2	84	52.180	Ictidomys_tridecemlineatus
ENSORLG00000010391	-	100	80.571	ENSKMAG00000001354	-	100	80.571	Kryptolebias_marmoratus
ENSORLG00000010391	-	61	84.235	ENSLBEG00000026238	-	100	84.235	Labrus_bergylta
ENSORLG00000010391	-	93	51.657	ENSLAFG00000011941	TARSL2	98	51.657	Loxodonta_africana
ENSORLG00000010391	-	94	51.420	ENSMFAG00000001902	TARSL2	83	51.420	Macaca_fascicularis
ENSORLG00000010391	-	94	51.570	ENSMMUG00000000278	TARSL2	83	51.570	Macaca_mulatta
ENSORLG00000010391	-	94	51.497	ENSMNEG00000034952	TARSL2	83	51.420	Macaca_nemestrina
ENSORLG00000010391	-	94	51.719	ENSMLEG00000035535	TARSL2	95	51.719	Mandrillus_leucophaeus
ENSORLG00000010391	-	100	79.971	ENSMAMG00000015032	-	100	79.971	Mastacembelus_armatus
ENSORLG00000010391	-	100	81.339	ENSMZEG00005015989	-	100	81.339	Maylandia_zebra
ENSORLG00000010391	-	84	69.697	ENSMGAG00000004951	TARSL2	88	69.697	Meleagris_gallopavo
ENSORLG00000010391	-	85	60.892	ENSMAUG00000015756	Tarsl2	82	60.892	Mesocricetus_auratus
ENSORLG00000010391	-	94	51.729	ENSMICG00000013039	TARSL2	97	51.729	Microcebus_murinus
ENSORLG00000010391	-	94	51.657	ENSMOCG00000014909	Tarsl2	84	51.657	Microtus_ochrogaster
ENSORLG00000010391	-	63	83.599	ENSMMOG00000016135	-	100	83.599	Mola_mola
ENSORLG00000010391	-	93	51.662	ENSMODG00000011941	TARSL2	83	51.662	Monodelphis_domestica
ENSORLG00000010391	-	99	78.014	ENSMALG00000007340	-	99	78.014	Monopterus_albus
ENSORLG00000010391	-	94	51.054	MGP_CAROLIEiJ_G0029834	Tarsl2	84	51.054	Mus_caroli
ENSORLG00000010391	-	94	50.904	ENSMUSG00000030515	Tarsl2	84	50.904	Mus_musculus
ENSORLG00000010391	-	94	51.054	MGP_PahariEiJ_G0013059	Tarsl2	84	51.054	Mus_pahari
ENSORLG00000010391	-	94	52.481	ENSMPUG00000011032	TARSL2	85	52.481	Mustela_putorius_furo
ENSORLG00000010391	-	93	51.205	ENSMLUG00000012870	-	83	51.128	Myotis_lucifugus
ENSORLG00000010391	-	82	52.406	ENSMLUG00000024482	-	93	52.406	Myotis_lucifugus
ENSORLG00000010391	-	94	51.729	ENSNGAG00000020451	Tarsl2	84	51.729	Nannospalax_galili
ENSORLG00000010391	-	98	81.406	ENSNBRG00000003429	-	99	81.406	Neolamprologus_brichardi
ENSORLG00000010391	-	94	51.565	ENSNLEG00000000541	TARSL2	84	51.565	Nomascus_leucogenys
ENSORLG00000010391	-	80	48.582	ENSMEUG00000002935	TARSL2	70	48.582	Notamacropus_eugenii
ENSORLG00000010391	-	74	44.200	ENSOPRG00000002689	-	62	44.200	Ochotona_princeps
ENSORLG00000010391	-	94	52.331	ENSODEG00000014454	TARSL2	84	52.331	Octodon_degus
ENSORLG00000010391	-	95	82.309	ENSONIG00000006402	-	99	82.009	Oreochromis_niloticus
ENSORLG00000010391	-	93	51.891	ENSOANG00000013263	TARSL2	98	51.891	Ornithorhynchus_anatinus
ENSORLG00000010391	-	93	51.584	ENSOCUG00000010740	TARSL2	93	51.506	Oryctolagus_cuniculus
ENSORLG00000010391	-	100	97.421	ENSORLG00020008928	-	100	97.421	Oryzias_latipes_hni
ENSORLG00000010391	-	100	97.421	ENSORLG00015014897	-	100	97.421	Oryzias_latipes_hsok
ENSORLG00000010391	-	100	90.129	ENSOMEG00000009022	-	100	90.129	Oryzias_melastigma
ENSORLG00000010391	-	95	50.224	ENSOGAG00000014311	TARSL2	83	50.224	Otolemur_garnettii
ENSORLG00000010391	-	94	51.802	ENSOARG00000016573	TARSL2	94	51.802	Ovis_aries
ENSORLG00000010391	-	94	51.729	ENSPPAG00000040066	TARSL2	96	51.729	Pan_paniscus
ENSORLG00000010391	-	94	51.880	ENSPPRG00000017275	TARSL2	83	52.970	Panthera_pardus
ENSORLG00000010391	-	93	51.958	ENSPTIG00000015184	TARSL2	83	51.880	Panthera_tigris_altaica
ENSORLG00000010391	-	94	51.880	ENSPTRG00000007516	TARSL2	83	51.880	Pan_troglodytes
ENSORLG00000010391	-	94	49.779	ENSPANG00000022401	TARSL2	84	49.706	Papio_anubis
ENSORLG00000010391	-	95	67.372	ENSPKIG00000010658	-	99	75.887	Paramormyrops_kingsleyae
ENSORLG00000010391	-	82	54.530	ENSPSIG00000008419	TARSL2	99	54.530	Pelodiscus_sinensis
ENSORLG00000010391	-	62	83.641	ENSPMGG00000007785	-	99	83.641	Periophthalmus_magnuspinnatus
ENSORLG00000010391	-	95	51.005	ENSPEMG00000019852	Tarsl2	90	51.054	Peromyscus_maniculatus_bairdii
ENSORLG00000010391	-	93	51.735	ENSPCIG00000022481	TARSL2	82	51.735	Phascolarctos_cinereus
ENSORLG00000010391	-	94	81.325	ENSPFOG00000013444	-	99	81.325	Poecilia_formosa
ENSORLG00000010391	-	100	79.399	ENSPLAG00000018145	-	100	79.399	Poecilia_latipinna
ENSORLG00000010391	-	100	79.256	ENSPMEG00000023625	-	100	79.256	Poecilia_mexicana
ENSORLG00000010391	-	61	86.353	ENSPREG00000017312	-	100	86.353	Poecilia_reticulata
ENSORLG00000010391	-	83	60.499	ENSPPYG00000006830	TARSL2	80	60.499	Pongo_abelii
ENSORLG00000010391	-	86	49.834	ENSPCAG00000011132	TARSL2	75	49.834	Procavia_capensis
ENSORLG00000010391	-	85	66.010	ENSPCOG00000026095	TARSL2	81	38.981	Propithecus_coquereli
ENSORLG00000010391	-	86	51.532	ENSPVAG00000012240	TARSL2	84	39.462	Pteropus_vampyrus
ENSORLG00000010391	-	100	81.481	ENSPNYG00000004232	-	100	81.481	Pundamilia_nyererei
ENSORLG00000010391	-	94	71.689	ENSPNAG00000002308	-	95	71.689	Pygocentrus_nattereri
ENSORLG00000010391	-	62	45.024	ENSRNOG00000024460	Tarsl2	76	45.131	Rattus_norvegicus
ENSORLG00000010391	-	94	51.868	ENSRBIG00000035707	TARSL2	86	51.868	Rhinopithecus_bieti
ENSORLG00000010391	-	94	51.796	ENSRROG00000029492	TARSL2	78	63.830	Rhinopithecus_roxellana
ENSORLG00000010391	-	95	51.709	ENSSBOG00000029807	TARSL2	97	51.846	Saimiri_boliviensis_boliviensis
ENSORLG00000010391	-	93	52.711	ENSSHAG00000010266	TARSL2	88	52.711	Sarcophilus_harrisii
ENSORLG00000010391	-	94	68.741	ENSSFOG00015022086	tars2	88	75.758	Scleropages_formosus
ENSORLG00000010391	-	96	81.009	ENSSMAG00000015682	-	99	80.383	Scophthalmus_maximus
ENSORLG00000010391	-	62	87.907	ENSSDUG00000007180	-	99	87.907	Seriola_dumerili
ENSORLG00000010391	-	61	88.967	ENSSLDG00000015367	-	99	88.967	Seriola_lalandi_dorsalis
ENSORLG00000010391	-	61	65.094	ENSSPUG00000001523	TARSL2	98	65.094	Sphenodon_punctatus
ENSORLG00000010391	-	100	76.109	ENSSPAG00000018887	-	100	76.109	Stegastes_partitus
ENSORLG00000010391	-	90	50.709	ENSSSCG00000005781	TARSL2	95	50.709	Sus_scrofa
ENSORLG00000010391	-	93	53.404	ENSTGUG00000005726	TARSL2	98	53.404	Taeniopygia_guttata
ENSORLG00000010391	-	60	60.520	ENSTGUG00000004602	-	98	60.520	Taeniopygia_guttata
ENSORLG00000010391	-	61	88.028	ENSTRUG00000015004	-	99	88.028	Takifugu_rubripes
ENSORLG00000010391	-	98	73.975	ENSTNIG00000008060	-	99	73.550	Tetraodon_nigroviridis
ENSORLG00000010391	-	70	58.592	ENSTBEG00000001134	-	74	58.592	Tupaia_belangeri
ENSORLG00000010391	-	93	51.205	ENSTTRG00000016207	TARSL2	95	51.128	Tursiops_truncatus
ENSORLG00000010391	-	98	50.361	ENSUMAG00000024371	TARSL2	99	54.937	Ursus_maritimus
ENSORLG00000010391	-	93	51.584	ENSVVUG00000014742	TARSL2	96	51.506	Vulpes_vulpes
ENSORLG00000010391	-	65	85.809	ENSXCOG00000019508	-	93	87.750	Xiphophorus_couchianus
ENSORLG00000010391	-	100	78.684	ENSXMAG00000016382	-	100	78.684	Xiphophorus_maculatus