EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000010428 (Gene tree)
Gene ID: 101171093
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 8987 bases
Position: chr11:21341149-21350135
Accession: 101171093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013068	RRM_1	PF00076.22	1.2e-27	1	2
ENSORLP00000013068	RRM_1	PF00076.22	1.2e-27	2	2
ENSORLP00000013065	RRM_1	PF00076.22	1.6e-27	1	2
ENSORLP00000013065	RRM_1	PF00076.22	1.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013069	-	846	-	ENSORLP00000013068	281 (aa)	-	H2M3R0
ENSORLT00000013066	-	4588	XM_004074162	ENSORLP00000013065	305 (aa)	XP_004074210	H2M3Q7

Gene Model

Click here to download ENSORLG00000010428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000010428	trnau1apa	61	31.461	ENSORLG00000015642	tia1	59	32.000
ENSORLG00000010428	trnau1apa	70	52.764	ENSORLG00000013265	trnau1apb	96	42.042
ENSORLG00000010428	trnau1apa	62	30.435	ENSORLG00000017479	pabpc4	58	30.435
ENSORLG00000010428	trnau1apa	62	30.075	ENSORLG00000002691	pabpc1a	65	30.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010428	trnau1apa	95	57.042	ENSG00000180098	TRNAU1AP	98	58.865	Homo_sapiens
ENSORLG00000010428	trnau1apa	100	80.583	ENSAPOG00000007148	TRNAU1AP	100	81.553	Acanthochromis_polyacanthus
ENSORLG00000010428	trnau1apa	95	57.394	ENSAMEG00000011367	TRNAU1AP	98	59.220	Ailuropoda_melanoleuca
ENSORLG00000010428	trnau1apa	91	94.382	ENSACIG00000004161	trnau1apa	93	94.382	Amphilophus_citrinellus
ENSORLG00000010428	trnau1apa	100	81.759	ENSAOCG00000008056	trnau1apa	100	81.759	Amphiprion_ocellaris
ENSORLG00000010428	trnau1apa	100	81.759	ENSAPEG00000008868	trnau1apa	100	81.759	Amphiprion_percula
ENSORLG00000010428	trnau1apa	100	79.114	ENSATEG00000012140	trnau1apa	100	77.215	Anabas_testudineus
ENSORLG00000010428	trnau1apa	92	57.295	ENSAPLG00000002606	TRNAU1AP	98	59.431	Anas_platyrhynchos
ENSORLG00000010428	trnau1apa	94	47.440	ENSACAG00000003995	-	97	48.805	Anolis_carolinensis
ENSORLG00000010428	trnau1apa	71	37.900	ENSACAG00000004205	-	86	40.171	Anolis_carolinensis
ENSORLG00000010428	trnau1apa	95	57.042	ENSANAG00000018976	TRNAU1AP	98	58.865	Aotus_nancymaae
ENSORLG00000010428	trnau1apa	100	83.062	ENSACLG00000018515	trnau1apa	100	83.062	Astatotilapia_calliptera
ENSORLG00000010428	trnau1apa	99	55.195	ENSAMXG00000013750	trnau1apa	97	55.195	Astyanax_mexicanus
ENSORLG00000010428	trnau1apa	94	68.889	ENSAMXG00000029240	-	97	68.889	Astyanax_mexicanus
ENSORLG00000010428	trnau1apa	95	57.042	ENSBTAG00000010393	TRNAU1AP	98	58.865	Bos_taurus
ENSORLG00000010428	trnau1apa	95	57.042	ENSCJAG00000009717	TRNAU1AP	98	58.865	Callithrix_jacchus
ENSORLG00000010428	trnau1apa	95	57.042	ENSCAFG00000011735	TRNAU1AP	98	58.865	Canis_familiaris
ENSORLG00000010428	trnau1apa	95	57.042	ENSCAFG00020023584	TRNAU1AP	98	58.865	Canis_lupus_dingo
ENSORLG00000010428	trnau1apa	95	57.042	ENSCHIG00000023215	TRNAU1AP	98	58.865	Capra_hircus
ENSORLG00000010428	trnau1apa	95	58.363	ENSTSYG00000003506	TRNAU1AP	98	60.215	Carlito_syrichta
ENSORLG00000010428	trnau1apa	95	57.042	ENSCPOG00000001925	TRNAU1AP	98	58.865	Cavia_porcellus
ENSORLG00000010428	trnau1apa	95	57.042	ENSCCAG00000037506	TRNAU1AP	98	58.865	Cebus_capucinus
ENSORLG00000010428	trnau1apa	95	56.690	ENSCATG00000044617	TRNAU1AP	98	58.511	Cercocebus_atys
ENSORLG00000010428	trnau1apa	95	57.042	ENSCLAG00000008223	TRNAU1AP	98	58.865	Chinchilla_lanigera
ENSORLG00000010428	trnau1apa	95	56.690	ENSCSAG00000001014	TRNAU1AP	98	58.511	Chlorocebus_sabaeus
ENSORLG00000010428	trnau1apa	92	55.986	ENSCPBG00000000121	TRNAU1AP	98	58.303	Chrysemys_picta_bellii
ENSORLG00000010428	trnau1apa	57	50.625	ENSCSAVG00000011781	-	84	50.625	Ciona_savignyi
ENSORLG00000010428	trnau1apa	95	48.630	ENSCANG00000041949	TRNAU1AP	97	53.448	Colobus_angolensis_palliatus
ENSORLG00000010428	trnau1apa	95	57.042	ENSCGRG00001004713	Trnau1ap	98	58.865	Cricetulus_griseus_chok1gshd
ENSORLG00000010428	trnau1apa	95	57.042	ENSCGRG00000014532	Trnau1ap	98	58.865	Cricetulus_griseus_crigri
ENSORLG00000010428	trnau1apa	100	71.975	ENSCSEG00000006663	trnau1apa	100	73.482	Cynoglossus_semilaevis
ENSORLG00000010428	trnau1apa	99	82.026	ENSCVAG00000018069	trnau1apa	99	84.314	Cyprinodon_variegatus
ENSORLG00000010428	trnau1apa	99	49.032	ENSDARG00000101323	trnau1apa	95	48.505	Danio_rerio
ENSORLG00000010428	trnau1apa	61	59.538	ENSDNOG00000047959	-	90	59.538	Dasypus_novemcinctus
ENSORLG00000010428	trnau1apa	95	57.042	ENSDNOG00000033009	TRNAU1AP	98	58.865	Dasypus_novemcinctus
ENSORLG00000010428	trnau1apa	94	58.242	ENSDORG00000006349	Trnau1ap	99	64.069	Dipodomys_ordii
ENSORLG00000010428	trnau1apa	92	34.891	FBgn0031607	CG15440	50	47.904	Drosophila_melanogaster
ENSORLG00000010428	trnau1apa	80	56.432	ENSETEG00000012594	TRNAU1AP	97	58.577	Echinops_telfairi
ENSORLG00000010428	trnau1apa	69	47.727	ENSEBUG00000006349	-	61	47.727	Eptatretus_burgeri
ENSORLG00000010428	trnau1apa	95	57.042	ENSEASG00005010062	TRNAU1AP	90	67.123	Equus_asinus_asinus
ENSORLG00000010428	trnau1apa	95	57.042	ENSECAG00000012980	TRNAU1AP	90	67.123	Equus_caballus
ENSORLG00000010428	trnau1apa	100	68.710	ENSELUG00000017686	trnau1apa	100	68.489	Esox_lucius
ENSORLG00000010428	trnau1apa	92	79.545	ENSELUG00000022790	-	93	79.545	Esox_lucius
ENSORLG00000010428	trnau1apa	95	57.042	ENSFCAG00000013401	TRNAU1AP	98	58.865	Felis_catus
ENSORLG00000010428	trnau1apa	91	56.877	ENSFALG00000001371	TRNAU1AP	98	58.148	Ficedula_albicollis
ENSORLG00000010428	trnau1apa	95	57.042	ENSFDAG00000018599	TRNAU1AP	98	58.865	Fukomys_damarensis
ENSORLG00000010428	trnau1apa	78	86.122	ENSFHEG00000018232	trnau1apa	82	86.122	Fundulus_heteroclitus
ENSORLG00000010428	trnau1apa	100	60.714	ENSGMOG00000016508	trnau1apa	99	63.107	Gadus_morhua
ENSORLG00000010428	trnau1apa	70	36.199	ENSGALG00000012721	C2H6orf52	90	36.842	Gallus_gallus
ENSORLG00000010428	trnau1apa	95	56.429	ENSGALG00000001310	-	98	57.651	Gallus_gallus
ENSORLG00000010428	trnau1apa	79	89.796	ENSGAFG00000004928	trnau1apa	91	90.417	Gambusia_affinis
ENSORLG00000010428	trnau1apa	100	81.759	ENSGACG00000001443	trnau1apa	100	80.456	Gasterosteus_aculeatus
ENSORLG00000010428	trnau1apa	92	56.584	ENSGAGG00000004940	TRNAU1AP	98	58.303	Gopherus_agassizii
ENSORLG00000010428	trnau1apa	95	57.042	ENSGGOG00000003511	TRNAU1AP	98	58.865	Gorilla_gorilla
ENSORLG00000010428	trnau1apa	100	93.333	ENSHBUG00000002510	trnau1apa	100	81.410	Haplochromis_burtoni
ENSORLG00000010428	trnau1apa	95	57.042	ENSHGLG00000010380	TRNAU1AP	98	58.865	Heterocephalus_glaber_female
ENSORLG00000010428	trnau1apa	95	55.282	ENSHGLG00100012699	TRNAU1AP	98	57.092	Heterocephalus_glaber_male
ENSORLG00000010428	trnau1apa	99	73.955	ENSHCOG00000014770	trnau1apa	99	73.312	Hippocampus_comes
ENSORLG00000010428	trnau1apa	95	57.042	ENSSTOG00000000079	TRNAU1AP	98	58.865	Ictidomys_tridecemlineatus
ENSORLG00000010428	trnau1apa	95	57.042	ENSJJAG00000010128	Trnau1ap	98	58.020	Jaculus_jaculus
ENSORLG00000010428	trnau1apa	100	82.468	ENSKMAG00000001230	trnau1apa	100	84.416	Kryptolebias_marmoratus
ENSORLG00000010428	trnau1apa	100	76.899	ENSLBEG00000011683	trnau1apa	100	77.215	Labrus_bergylta
ENSORLG00000010428	trnau1apa	94	51.071	ENSLACG00000005541	TRNAU1AP	96	51.903	Latimeria_chalumnae
ENSORLG00000010428	trnau1apa	94	58.865	ENSLOCG00000004041	trnau1apa	97	59.375	Lepisosteus_oculatus
ENSORLG00000010428	trnau1apa	95	57.394	ENSLAFG00000007628	TRNAU1AP	98	59.220	Loxodonta_africana
ENSORLG00000010428	trnau1apa	95	69.630	ENSMFAG00000043751	TRNAU1AP	98	58.511	Macaca_fascicularis
ENSORLG00000010428	trnau1apa	95	56.690	ENSMMUG00000006561	TRNAU1AP	98	58.511	Macaca_mulatta
ENSORLG00000010428	trnau1apa	95	69.630	ENSMNEG00000044201	TRNAU1AP	98	58.511	Macaca_nemestrina
ENSORLG00000010428	trnau1apa	95	69.630	ENSMLEG00000015649	TRNAU1AP	98	60.000	Mandrillus_leucophaeus
ENSORLG00000010428	trnau1apa	99	80.000	ENSMAMG00000001247	trnau1apa	99	80.000	Mastacembelus_armatus
ENSORLG00000010428	trnau1apa	100	83.062	ENSMZEG00005017722	trnau1apa	100	83.062	Maylandia_zebra
ENSORLG00000010428	trnau1apa	93	56.410	ENSMGAG00000002105	TRNAU1AP	98	58.182	Meleagris_gallopavo
ENSORLG00000010428	trnau1apa	95	57.042	ENSMICG00000008386	TRNAU1AP	98	58.865	Microcebus_murinus
ENSORLG00000010428	trnau1apa	95	57.042	ENSMOCG00000011189	Trnau1ap	98	58.865	Microtus_ochrogaster
ENSORLG00000010428	trnau1apa	100	72.509	ENSMMOG00000012107	trnau1apa	99	74.570	Mola_mola
ENSORLG00000010428	trnau1apa	95	57.534	ENSMODG00000010927	TRNAU1AP	98	57.801	Monodelphis_domestica
ENSORLG00000010428	trnau1apa	100	79.421	ENSMALG00000016778	trnau1apa	100	78.778	Monopterus_albus
ENSORLG00000010428	trnau1apa	95	56.690	MGP_CAROLIEiJ_G0026563	Trnau1ap	97	67.816	Mus_caroli
ENSORLG00000010428	trnau1apa	95	56.690	ENSMUSG00000028898	Trnau1ap	97	67.816	Mus_musculus
ENSORLG00000010428	trnau1apa	95	56.690	MGP_PahariEiJ_G0028896	Trnau1ap	97	67.816	Mus_pahari
ENSORLG00000010428	trnau1apa	95	56.690	MGP_SPRETEiJ_G0027544	Trnau1ap	97	67.816	Mus_spretus
ENSORLG00000010428	trnau1apa	95	57.394	ENSMPUG00000015511	TRNAU1AP	98	59.220	Mustela_putorius_furo
ENSORLG00000010428	trnau1apa	95	57.042	ENSMLUG00000012586	TRNAU1AP	98	58.865	Myotis_lucifugus
ENSORLG00000010428	trnau1apa	95	57.042	ENSNGAG00000015881	Trnau1ap	98	59.247	Nannospalax_galili
ENSORLG00000010428	trnau1apa	100	72.054	ENSNBRG00000001758	trnau1apa	99	72.054	Neolamprologus_brichardi
ENSORLG00000010428	trnau1apa	95	58.719	ENSNLEG00000009822	TRNAU1AP	98	60.573	Nomascus_leucogenys
ENSORLG00000010428	trnau1apa	93	57.193	ENSMEUG00000006117	TRNAU1AP	98	57.455	Notamacropus_eugenii
ENSORLG00000010428	trnau1apa	55	62.069	ENSOPRG00000007084	-	62	62.069	Ochotona_princeps
ENSORLG00000010428	trnau1apa	95	57.042	ENSODEG00000002970	TRNAU1AP	98	58.865	Octodon_degus
ENSORLG00000010428	trnau1apa	80	85.772	ENSONIG00000004715	trnau1apa	91	87.013	Oreochromis_niloticus
ENSORLG00000010428	trnau1apa	94	44.330	ENSOANG00000005325	-	96	45.683	Ornithorhynchus_anatinus
ENSORLG00000010428	trnau1apa	95	55.634	ENSOCUG00000011704	-	98	57.447	Oryctolagus_cuniculus
ENSORLG00000010428	trnau1apa	95	48.805	ENSOCUG00000002353	-	98	48.123	Oryctolagus_cuniculus
ENSORLG00000010428	trnau1apa	82	49.200	ENSOCUG00000006834	-	88	50.218	Oryctolagus_cuniculus
ENSORLG00000010428	trnau1apa	100	100.000	ENSORLG00020000926	trnau1ap	100	100.000	Oryzias_latipes_hni
ENSORLG00000010428	trnau1apa	100	100.000	ENSORLG00015009858	trnau1ap	100	100.000	Oryzias_latipes_hsok
ENSORLG00000010428	trnau1apa	100	96.066	ENSOMEG00000007873	trnau1apa	100	96.066	Oryzias_melastigma
ENSORLG00000010428	trnau1apa	95	57.042	ENSOGAG00000002274	TRNAU1AP	98	58.865	Otolemur_garnettii
ENSORLG00000010428	trnau1apa	95	57.042	ENSOARG00000002843	TRNAU1AP	98	58.865	Ovis_aries
ENSORLG00000010428	trnau1apa	95	57.042	ENSPPAG00000033927	TRNAU1AP	98	58.865	Pan_paniscus
ENSORLG00000010428	trnau1apa	95	57.042	ENSPPRG00000004416	TRNAU1AP	98	58.865	Panthera_pardus
ENSORLG00000010428	trnau1apa	95	57.042	ENSPTIG00000016677	TRNAU1AP	98	58.865	Panthera_tigris_altaica
ENSORLG00000010428	trnau1apa	87	53.036	ENSPTRG00000000434	-	93	52.416	Pan_troglodytes
ENSORLG00000010428	trnau1apa	95	56.690	ENSPANG00000016019	TRNAU1AP	98	58.511	Papio_anubis
ENSORLG00000010428	trnau1apa	97	56.811	ENSPKIG00000015511	trnau1apa	96	56.333	Paramormyrops_kingsleyae
ENSORLG00000010428	trnau1apa	92	79.545	ENSPKIG00000022205	-	95	79.545	Paramormyrops_kingsleyae
ENSORLG00000010428	trnau1apa	92	57.394	ENSPSIG00000006864	TRNAU1AP	98	58.672	Pelodiscus_sinensis
ENSORLG00000010428	trnau1apa	99	69.097	ENSPMGG00000023893	trnau1apa	98	69.097	Periophthalmus_magnuspinnatus
ENSORLG00000010428	trnau1apa	95	56.690	ENSPEMG00000007877	Trnau1ap	98	58.511	Peromyscus_maniculatus_bairdii
ENSORLG00000010428	trnau1apa	75	56.364	ENSPMAG00000005934	trnau1apa	96	56.364	Petromyzon_marinus
ENSORLG00000010428	trnau1apa	60	53.448	ENSPMAG00000000592	trnau1apa	96	53.448	Petromyzon_marinus
ENSORLG00000010428	trnau1apa	99	82.353	ENSPFOG00000008100	trnau1apa	99	82.353	Poecilia_formosa
ENSORLG00000010428	trnau1apa	95	82.313	ENSPLAG00000010236	trnau1apa	99	82.313	Poecilia_latipinna
ENSORLG00000010428	trnau1apa	99	80.328	ENSPMEG00000016387	trnau1apa	97	80.328	Poecilia_mexicana
ENSORLG00000010428	trnau1apa	88	85.870	ENSPREG00000019821	trnau1apa	98	85.870	Poecilia_reticulata
ENSORLG00000010428	trnau1apa	86	48.679	ENSPPYG00000001639	-	98	50.588	Pongo_abelii
ENSORLG00000010428	trnau1apa	95	57.042	ENSPCOG00000027712	-	98	58.865	Propithecus_coquereli
ENSORLG00000010428	trnau1apa	94	46.520	ENSPCOG00000023470	-	98	48.540	Propithecus_coquereli
ENSORLG00000010428	trnau1apa	95	57.042	ENSPVAG00000017214	TRNAU1AP	98	58.865	Pteropus_vampyrus
ENSORLG00000010428	trnau1apa	100	82.222	ENSPNYG00000010130	trnau1apa	100	81.731	Pundamilia_nyererei
ENSORLG00000010428	trnau1apa	99	54.064	ENSPNAG00000024905	trnau1apa	97	54.064	Pygocentrus_nattereri
ENSORLG00000010428	trnau1apa	88	57.812	ENSRNOG00000055344	Trnau1ap	86	59.843	Rattus_norvegicus
ENSORLG00000010428	trnau1apa	95	57.042	ENSRBIG00000029083	TRNAU1AP	98	58.865	Rhinopithecus_bieti
ENSORLG00000010428	trnau1apa	95	57.042	ENSRROG00000029128	TRNAU1AP	98	58.865	Rhinopithecus_roxellana
ENSORLG00000010428	trnau1apa	95	57.042	ENSSBOG00000021299	TRNAU1AP	98	58.865	Saimiri_boliviensis_boliviensis
ENSORLG00000010428	trnau1apa	95	57.192	ENSSHAG00000008108	TRNAU1AP	98	57.447	Sarcophilus_harrisii
ENSORLG00000010428	trnau1apa	100	77.492	ENSSMAG00000020851	trnau1apa	100	78.457	Scophthalmus_maximus
ENSORLG00000010428	trnau1apa	100	81.410	ENSSDUG00000011734	trnau1apa	100	82.051	Seriola_dumerili
ENSORLG00000010428	trnau1apa	100	70.979	ENSSLDG00000012101	trnau1apa	99	70.979	Seriola_lalandi_dorsalis
ENSORLG00000010428	trnau1apa	93	57.040	ENSSARG00000007536	TRNAU1AP	98	58.909	Sorex_araneus
ENSORLG00000010428	trnau1apa	63	50.521	ENSSPUG00000010415	-	99	48.438	Sphenodon_punctatus
ENSORLG00000010428	trnau1apa	95	53.512	ENSSPUG00000010400	-	99	54.667	Sphenodon_punctatus
ENSORLG00000010428	trnau1apa	100	81.759	ENSSPAG00000005029	trnau1apa	100	82.085	Stegastes_partitus
ENSORLG00000010428	trnau1apa	95	57.042	ENSSSCG00000030284	TRNAU1AP	98	58.865	Sus_scrofa
ENSORLG00000010428	trnau1apa	70	38.208	ENSTGUG00000005908	-	100	41.262	Taeniopygia_guttata
ENSORLG00000010428	trnau1apa	93	56.777	ENSTGUG00000000735	-	98	58.182	Taeniopygia_guttata
ENSORLG00000010428	trnau1apa	100	78.247	ENSTRUG00000003352	trnau1apa	100	77.273	Takifugu_rubripes
ENSORLG00000010428	trnau1apa	100	75.806	ENSTNIG00000006129	trnau1apa	100	75.484	Tetraodon_nigroviridis
ENSORLG00000010428	trnau1apa	81	52.227	ENSTBEG00000008049	-	96	51.822	Tupaia_belangeri
ENSORLG00000010428	trnau1apa	95	57.042	ENSTTRG00000001854	TRNAU1AP	98	58.865	Tursiops_truncatus
ENSORLG00000010428	trnau1apa	92	56.940	ENSUAMG00000008789	TRNAU1AP	98	59.041	Ursus_americanus
ENSORLG00000010428	trnau1apa	95	57.042	ENSUMAG00000011068	TRNAU1AP	98	58.020	Ursus_maritimus
ENSORLG00000010428	trnau1apa	96	49.342	ENSVPAG00000006778	TRNAU1AP	98	51.020	Vicugna_pacos
ENSORLG00000010428	trnau1apa	95	56.207	ENSVVUG00000012518	TRNAU1AP	91	58.214	Vulpes_vulpes
ENSORLG00000010428	trnau1apa	99	83.007	ENSXMAG00000017361	trnau1apa	99	83.007	Xiphophorus_maculatus