EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000010529 (Gene tree)
Gene ID: 101173885
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 13906 bases
Position: chr15:25194258-25208163
Accession: 101173885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013197	SpoU_methylase	PF00588.19	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013198	-	6235	XM_023963278	ENSORLP00000013197	1613 (aa)	XP_023819046	H2M436

Gene Model

Click here to download ENSORLG00000010529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010529	si:dkey-85a20.4	88	42.721	ENSG00000059588	TARBP1	99	40.320	Homo_sapiens
ENSORLG00000010529	si:dkey-85a20.4	99	71.192	ENSAPOG00000016419	si:dkey-85a20.4	100	71.130	Acanthochromis_polyacanthus
ENSORLG00000010529	si:dkey-85a20.4	83	42.734	ENSAMEG00000003359	TARBP1	99	42.641	Ailuropoda_melanoleuca
ENSORLG00000010529	si:dkey-85a20.4	99	67.587	ENSATEG00000020266	si:dkey-85a20.4	99	67.587	Anabas_testudineus
ENSORLG00000010529	si:dkey-85a20.4	83	44.957	ENSAPLG00000007666	TARBP1	99	45.038	Anas_platyrhynchos
ENSORLG00000010529	si:dkey-85a20.4	84	42.372	ENSACAG00000001142	TARBP1	86	41.940	Anolis_carolinensis
ENSORLG00000010529	si:dkey-85a20.4	85	42.127	ENSANAG00000022031	TARBP1	88	42.316	Aotus_nancymaae
ENSORLG00000010529	si:dkey-85a20.4	82	53.475	ENSBTAG00000004517	TARBP1	99	53.475	Bos_taurus
ENSORLG00000010529	si:dkey-85a20.4	99	40.096	ENSCJAG00000018155	TARBP1	99	40.324	Callithrix_jacchus
ENSORLG00000010529	si:dkey-85a20.4	85	43.548	ENSCAFG00000011533	TARBP1	98	43.140	Canis_familiaris
ENSORLG00000010529	si:dkey-85a20.4	85	43.592	ENSCAFG00020027141	TARBP1	99	40.096	Canis_lupus_dingo
ENSORLG00000010529	si:dkey-85a20.4	80	43.750	ENSTSYG00000010382	TARBP1	96	43.769	Carlito_syrichta
ENSORLG00000010529	si:dkey-85a20.4	78	41.163	ENSCAPG00000010831	TARBP1	99	40.700	Cavia_aperea
ENSORLG00000010529	si:dkey-85a20.4	85	43.274	ENSCPOG00000013995	TARBP1	99	40.098	Cavia_porcellus
ENSORLG00000010529	si:dkey-85a20.4	85	43.117	ENSCCAG00000037278	TARBP1	99	40.108	Cebus_capucinus
ENSORLG00000010529	si:dkey-85a20.4	88	43.093	ENSCATG00000011754	TARBP1	99	40.544	Cercocebus_atys
ENSORLG00000010529	si:dkey-85a20.4	80	43.071	ENSCLAG00000003655	TARBP1	96	43.189	Chinchilla_lanigera
ENSORLG00000010529	si:dkey-85a20.4	79	43.869	ENSCSAG00000010100	TARBP1	99	43.927	Chlorocebus_sabaeus
ENSORLG00000010529	si:dkey-85a20.4	87	41.657	ENSCPBG00000005587	TARBP1	95	41.215	Chrysemys_picta_bellii
ENSORLG00000010529	si:dkey-85a20.4	83	43.319	ENSCANG00000034343	TARBP1	99	43.372	Colobus_angolensis_palliatus
ENSORLG00000010529	si:dkey-85a20.4	85	43.631	ENSCGRG00001016690	Tarbp1	87	43.592	Cricetulus_griseus_chok1gshd
ENSORLG00000010529	si:dkey-85a20.4	85	43.561	ENSCGRG00000016893	Tarbp1	94	43.521	Cricetulus_griseus_crigri
ENSORLG00000010529	si:dkey-85a20.4	99	59.097	ENSCSEG00000005255	si:dkey-85a20.4	99	65.031	Cynoglossus_semilaevis
ENSORLG00000010529	si:dkey-85a20.4	99	54.512	ENSDARG00000079055	si:dkey-85a20.4	99	69.535	Danio_rerio
ENSORLG00000010529	si:dkey-85a20.4	87	42.574	ENSDNOG00000008637	TARBP1	99	39.739	Dasypus_novemcinctus
ENSORLG00000010529	si:dkey-85a20.4	79	45.234	ENSDORG00000007984	Tarbp1	100	45.461	Dipodomys_ordii
ENSORLG00000010529	si:dkey-85a20.4	99	41.244	ENSEASG00005000252	TARBP1	99	41.123	Equus_asinus_asinus
ENSORLG00000010529	si:dkey-85a20.4	85	43.997	ENSECAG00000023673	TARBP1	97	44.929	Equus_caballus
ENSORLG00000010529	si:dkey-85a20.4	99	58.088	ENSELUG00000012193	si:dkey-85a20.4	99	57.946	Esox_lucius
ENSORLG00000010529	si:dkey-85a20.4	85	42.232	ENSFCAG00000014183	TARBP1	99	39.201	Felis_catus
ENSORLG00000010529	si:dkey-85a20.4	80	44.985	ENSFALG00000013565	TARBP1	99	44.503	Ficedula_albicollis
ENSORLG00000010529	si:dkey-85a20.4	78	41.962	ENSFDAG00000001308	TARBP1	99	42.113	Fukomys_damarensis
ENSORLG00000010529	si:dkey-85a20.4	99	60.356	ENSFHEG00000007565	si:dkey-85a20.4	95	74.255	Fundulus_heteroclitus
ENSORLG00000010529	si:dkey-85a20.4	85	60.845	ENSGMOG00000004549	si:dkey-85a20.4	99	60.658	Gadus_morhua
ENSORLG00000010529	si:dkey-85a20.4	84	44.421	ENSGALG00000011000	TARBP1	97	44.870	Gallus_gallus
ENSORLG00000010529	si:dkey-85a20.4	99	68.350	ENSGAFG00000007387	si:dkey-85a20.4	99	68.288	Gambusia_affinis
ENSORLG00000010529	si:dkey-85a20.4	86	68.169	ENSGACG00000005865	si:dkey-85a20.4	99	68.028	Gasterosteus_aculeatus
ENSORLG00000010529	si:dkey-85a20.4	83	45.926	ENSGAGG00000012102	TARBP1	89	45.628	Gopherus_agassizii
ENSORLG00000010529	si:dkey-85a20.4	84	41.970	ENSGGOG00000022879	TARBP1	99	42.162	Gorilla_gorilla
ENSORLG00000010529	si:dkey-85a20.4	99	69.865	ENSHBUG00000008877	si:dkey-85a20.4	99	69.865	Haplochromis_burtoni
ENSORLG00000010529	si:dkey-85a20.4	85	43.586	ENSHGLG00000011592	TARBP1	99	40.595	Heterocephalus_glaber_female
ENSORLG00000010529	si:dkey-85a20.4	85	43.728	ENSHGLG00100015169	TARBP1	95	43.657	Heterocephalus_glaber_male
ENSORLG00000010529	si:dkey-85a20.4	95	55.943	ENSIPUG00000005249	si:dkey-85a20.4	98	51.765	Ictalurus_punctatus
ENSORLG00000010529	si:dkey-85a20.4	82	43.690	ENSSTOG00000032291	TARBP1	96	43.279	Ictidomys_tridecemlineatus
ENSORLG00000010529	si:dkey-85a20.4	84	41.004	ENSJJAG00000017840	Tarbp1	94	41.130	Jaculus_jaculus
ENSORLG00000010529	si:dkey-85a20.4	86	66.139	ENSKMAG00000017546	si:dkey-85a20.4	96	69.697	Kryptolebias_marmoratus
ENSORLG00000010529	si:dkey-85a20.4	81	72.727	ENSLBEG00000012132	si:dkey-85a20.4	93	72.727	Labrus_bergylta
ENSORLG00000010529	si:dkey-85a20.4	99	42.032	ENSLACG00000004337	TARBP1	99	41.612	Latimeria_chalumnae
ENSORLG00000010529	si:dkey-85a20.4	99	51.845	ENSLOCG00000016214	si:dkey-85a20.4	100	51.845	Lepisosteus_oculatus
ENSORLG00000010529	si:dkey-85a20.4	85	43.812	ENSLAFG00000011394	TARBP1	93	42.628	Loxodonta_africana
ENSORLG00000010529	si:dkey-85a20.4	88	41.455	ENSMFAG00000041068	TARBP1	99	39.394	Macaca_fascicularis
ENSORLG00000010529	si:dkey-85a20.4	88	41.478	ENSMMUG00000021703	TARBP1	99	39.086	Macaca_mulatta
ENSORLG00000010529	si:dkey-85a20.4	88	42.828	ENSMNEG00000045002	TARBP1	99	40.337	Macaca_nemestrina
ENSORLG00000010529	si:dkey-85a20.4	83	43.415	ENSMLEG00000044182	TARBP1	99	43.469	Mandrillus_leucophaeus
ENSORLG00000010529	si:dkey-85a20.4	99	64.969	ENSMAMG00000021760	si:dkey-85a20.4	99	64.969	Mastacembelus_armatus
ENSORLG00000010529	si:dkey-85a20.4	99	70.049	ENSMZEG00005005751	si:dkey-85a20.4	99	70.049	Maylandia_zebra
ENSORLG00000010529	si:dkey-85a20.4	85	44.006	ENSMAUG00000020968	Tarbp1	87	43.935	Mesocricetus_auratus
ENSORLG00000010529	si:dkey-85a20.4	85	39.341	ENSMICG00000015280	TARBP1	97	64.824	Microcebus_murinus
ENSORLG00000010529	si:dkey-85a20.4	85	43.777	ENSMOCG00000004128	Tarbp1	87	43.777	Microtus_ochrogaster
ENSORLG00000010529	si:dkey-85a20.4	99	63.586	ENSMMOG00000007795	si:dkey-85a20.4	99	63.462	Mola_mola
ENSORLG00000010529	si:dkey-85a20.4	85	43.312	ENSMODG00000008504	TARBP1	99	40.178	Monodelphis_domestica
ENSORLG00000010529	si:dkey-85a20.4	98	66.002	ENSMALG00000002916	si:dkey-85a20.4	99	66.002	Monopterus_albus
ENSORLG00000010529	si:dkey-85a20.4	85	43.232	MGP_CAROLIEiJ_G0031729	Tarbp1	78	59.302	Mus_caroli
ENSORLG00000010529	si:dkey-85a20.4	85	44.051	ENSMUSG00000090290	Tarbp1	87	44.051	Mus_musculus
ENSORLG00000010529	si:dkey-85a20.4	85	44.232	MGP_PahariEiJ_G0023326	Tarbp1	87	44.232	Mus_pahari
ENSORLG00000010529	si:dkey-85a20.4	85	44.122	MGP_SPRETEiJ_G0032846	Tarbp1	87	44.122	Mus_spretus
ENSORLG00000010529	si:dkey-85a20.4	76	43.869	ENSMPUG00000002802	TARBP1	99	43.710	Mustela_putorius_furo
ENSORLG00000010529	si:dkey-85a20.4	83	41.541	ENSMLUG00000002414	TARBP1	99	41.397	Myotis_lucifugus
ENSORLG00000010529	si:dkey-85a20.4	85	43.156	ENSNLEG00000002518	TARBP1	99	40.071	Nomascus_leucogenys
ENSORLG00000010529	si:dkey-85a20.4	68	51.414	ENSOPRG00000013822	TARBP1	69	51.414	Ochotona_princeps
ENSORLG00000010529	si:dkey-85a20.4	90	41.391	ENSODEG00000005238	TARBP1	98	40.941	Octodon_degus
ENSORLG00000010529	si:dkey-85a20.4	85	72.060	ENSONIG00000009789	si:dkey-85a20.4	100	72.202	Oreochromis_niloticus
ENSORLG00000010529	si:dkey-85a20.4	85	43.530	ENSOCUG00000017418	TARBP1	99	40.205	Oryctolagus_cuniculus
ENSORLG00000010529	si:dkey-85a20.4	100	98.265	ENSORLG00020019264	si:dkey-85a20.4	100	98.265	Oryzias_latipes_hni
ENSORLG00000010529	si:dkey-85a20.4	99	97.954	ENSORLG00015003276	si:dkey-85a20.4	100	97.954	Oryzias_latipes_hsok
ENSORLG00000010529	si:dkey-85a20.4	85	42.094	ENSOGAG00000002379	TARBP1	99	39.230	Otolemur_garnettii
ENSORLG00000010529	si:dkey-85a20.4	85	43.101	ENSOARG00000003434	TARBP1	96	42.488	Ovis_aries
ENSORLG00000010529	si:dkey-85a20.4	83	43.544	ENSPPAG00000028097	TARBP1	99	43.741	Pan_paniscus
ENSORLG00000010529	si:dkey-85a20.4	84	42.682	ENSPPRG00000013561	TARBP1	96	44.505	Panthera_pardus
ENSORLG00000010529	si:dkey-85a20.4	82	43.672	ENSPTIG00000009281	TARBP1	99	43.580	Panthera_tigris_altaica
ENSORLG00000010529	si:dkey-85a20.4	88	42.711	ENSPTRG00000002124	TARBP1	99	40.215	Pan_troglodytes
ENSORLG00000010529	si:dkey-85a20.4	88	42.984	ENSPANG00000021933	TARBP1	99	40.422	Papio_anubis
ENSORLG00000010529	si:dkey-85a20.4	99	54.809	ENSPKIG00000016716	si:dkey-85a20.4	99	54.688	Paramormyrops_kingsleyae
ENSORLG00000010529	si:dkey-85a20.4	78	45.251	ENSPSIG00000010699	TARBP1	99	45.035	Pelodiscus_sinensis
ENSORLG00000010529	si:dkey-85a20.4	85	44.358	ENSPEMG00000006888	Tarbp1	92	44.288	Peromyscus_maniculatus_bairdii
ENSORLG00000010529	si:dkey-85a20.4	76	66.332	ENSPCIG00000029710	TARBP1	98	66.332	Phascolarctos_cinereus
ENSORLG00000010529	si:dkey-85a20.4	86	69.264	ENSPFOG00000013020	si:dkey-85a20.4	99	68.906	Poecilia_formosa
ENSORLG00000010529	si:dkey-85a20.4	99	67.363	ENSPLAG00000006044	si:dkey-85a20.4	99	67.302	Poecilia_latipinna
ENSORLG00000010529	si:dkey-85a20.4	99	67.855	ENSPMEG00000017857	si:dkey-85a20.4	99	67.793	Poecilia_mexicana
ENSORLG00000010529	si:dkey-85a20.4	99	67.609	ENSPREG00000022753	si:dkey-85a20.4	99	67.425	Poecilia_reticulata
ENSORLG00000010529	si:dkey-85a20.4	76	42.754	ENSPPYG00000000102	TARBP1	99	42.568	Pongo_abelii
ENSORLG00000010529	si:dkey-85a20.4	71	76.871	ENSPCAG00000004808	TARBP1	80	76.871	Procavia_capensis
ENSORLG00000010529	si:dkey-85a20.4	85	42.256	ENSPCOG00000005666	TARBP1	99	39.303	Propithecus_coquereli
ENSORLG00000010529	si:dkey-85a20.4	80	61.404	ENSPVAG00000014798	TARBP1	99	37.105	Pteropus_vampyrus
ENSORLG00000010529	si:dkey-85a20.4	99	67.760	ENSPNYG00000019135	si:dkey-85a20.4	99	67.242	Pundamilia_nyererei
ENSORLG00000010529	si:dkey-85a20.4	85	42.202	ENSRNOG00000053574	Tarbp1	87	42.202	Rattus_norvegicus
ENSORLG00000010529	si:dkey-85a20.4	89	40.107	ENSRBIG00000043362	TARBP1	98	40.215	Rhinopithecus_bieti
ENSORLG00000010529	si:dkey-85a20.4	88	42.779	ENSRROG00000029527	TARBP1	96	41.877	Rhinopithecus_roxellana
ENSORLG00000010529	si:dkey-85a20.4	83	43.282	ENSSBOG00000034503	TARBP1	96	43.282	Saimiri_boliviensis_boliviensis
ENSORLG00000010529	si:dkey-85a20.4	82	43.355	ENSSHAG00000000013	TARBP1	99	43.157	Sarcophilus_harrisii
ENSORLG00000010529	si:dkey-85a20.4	90	57.723	ENSSFOG00015002660	si:dkey-85a20.4	97	58.712	Scleropages_formosus
ENSORLG00000010529	si:dkey-85a20.4	99	66.646	ENSSMAG00000007081	si:dkey-85a20.4	99	66.950	Scophthalmus_maximus
ENSORLG00000010529	si:dkey-85a20.4	99	66.277	ENSSDUG00000023566	si:dkey-85a20.4	99	66.215	Seriola_dumerili
ENSORLG00000010529	si:dkey-85a20.4	99	69.587	ENSSLDG00000020200	si:dkey-85a20.4	100	69.525	Seriola_lalandi_dorsalis
ENSORLG00000010529	si:dkey-85a20.4	75	54.988	ENSSARG00000012207	TARBP1	76	54.988	Sorex_araneus
ENSORLG00000010529	si:dkey-85a20.4	85	43.577	ENSSPUG00000015364	TARBP1	97	40.943	Sphenodon_punctatus
ENSORLG00000010529	si:dkey-85a20.4	99	71.789	ENSSPAG00000007213	si:dkey-85a20.4	99	71.727	Stegastes_partitus
ENSORLG00000010529	si:dkey-85a20.4	99	40.995	ENSSSCG00000010160	TARBP1	99	43.728	Sus_scrofa
ENSORLG00000010529	si:dkey-85a20.4	80	44.996	ENSTGUG00000010214	TARBP1	99	44.695	Taeniopygia_guttata
ENSORLG00000010529	si:dkey-85a20.4	93	59.876	ENSTNIG00000016586	si:dkey-85a20.4	99	65.033	Tetraodon_nigroviridis
ENSORLG00000010529	si:dkey-85a20.4	75	47.222	ENSTTRG00000008707	TARBP1	81	44.361	Tursiops_truncatus
ENSORLG00000010529	si:dkey-85a20.4	80	42.772	ENSUMAG00000006730	TARBP1	97	42.675	Ursus_maritimus
ENSORLG00000010529	si:dkey-85a20.4	70	71.287	ENSVPAG00000007665	TARBP1	79	71.287	Vicugna_pacos
ENSORLG00000010529	si:dkey-85a20.4	84	43.500	ENSVVUG00000007460	TARBP1	97	43.266	Vulpes_vulpes
ENSORLG00000010529	si:dkey-85a20.4	83	41.727	ENSXETG00000016224	tarbp1	99	42.090	Xenopus_tropicalis
ENSORLG00000010529	si:dkey-85a20.4	82	71.003	ENSXCOG00000011779	si:dkey-85a20.4	100	71.003	Xiphophorus_couchianus
ENSORLG00000010529	si:dkey-85a20.4	64	69.781	ENSXMAG00000009600	si:dkey-85a20.4	100	69.685	Xiphophorus_maculatus