EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000010541 (Gene tree)
Gene ID: 101175357
Gene Symbol: nom1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 8211 bases
Position: chr20:19634733-19642943
Accession: 101175357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013214	MA3	PF02847.17	8.3e-23	1	1
ENSORLP00000013214	MIF4G	PF02854.19	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013215	-	3616	XM_004081114	ENSORLP00000013214	827 (aa)	XP_004081162	H2M453

Gene Model

Click here to download ENSORLG00000010541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010541	nom1	98	53.118	ENSG00000146909	NOM1	94	52.330	Homo_sapiens
ENSORLG00000010541	nom1	64	86.116	ENSAPOG00000012073	nom1	100	75.117	Acanthochromis_polyacanthus
ENSORLG00000010541	nom1	83	56.039	ENSAMEG00000001412	NOM1	94	57.453	Ailuropoda_melanoleuca
ENSORLG00000010541	nom1	98	72.034	ENSACIG00000018050	nom1	100	70.972	Amphilophus_citrinellus
ENSORLG00000010541	nom1	64	85.366	ENSAOCG00000006229	nom1	100	75.235	Amphiprion_ocellaris
ENSORLG00000010541	nom1	100	74.648	ENSAPEG00000015994	nom1	100	75.147	Amphiprion_percula
ENSORLG00000010541	nom1	100	72.586	ENSATEG00000005405	nom1	100	73.540	Anabas_testudineus
ENSORLG00000010541	nom1	80	58.195	ENSAPLG00000006585	NOM1	96	58.410	Anas_platyrhynchos
ENSORLG00000010541	nom1	80	56.196	ENSACAG00000011192	NOM1	92	52.503	Anolis_carolinensis
ENSORLG00000010541	nom1	98	73.341	ENSACLG00000000033	nom1	98	72.639	Astatotilapia_calliptera
ENSORLG00000010541	nom1	64	73.774	ENSAMXG00000041486	nom1	98	57.986	Astyanax_mexicanus
ENSORLG00000010541	nom1	97	50.485	ENSBTAG00000016435	NOM1	94	50.782	Bos_taurus
ENSORLG00000010541	nom1	98	52.732	ENSCJAG00000004336	NOM1	94	52.029	Callithrix_jacchus
ENSORLG00000010541	nom1	83	55.237	ENSCAFG00020005121	NOM1	79	55.683	Canis_lupus_dingo
ENSORLG00000010541	nom1	93	51.621	ENSCHIG00000020102	NOM1	62	63.962	Capra_hircus
ENSORLG00000010541	nom1	97	53.269	ENSTSYG00000000227	NOM1	93	53.260	Carlito_syrichta
ENSORLG00000010541	nom1	63	66.795	ENSCAPG00000016273	NOM1	97	67.583	Cavia_aperea
ENSORLG00000010541	nom1	98	49.525	ENSCPOG00000025538	NOM1	77	55.233	Cavia_porcellus
ENSORLG00000010541	nom1	89	66.901	ENSCCAG00000014944	NOM1	96	66.860	Cebus_capucinus
ENSORLG00000010541	nom1	82	56.749	ENSCLAG00000000267	NOM1	79	57.040	Chinchilla_lanigera
ENSORLG00000010541	nom1	73	68.061	ENSCPBG00000018215	NOM1	67	68.061	Chrysemys_picta_bellii
ENSORLG00000010541	nom1	84	37.606	ENSCING00000005248	-	90	38.393	Ciona_intestinalis
ENSORLG00000010541	nom1	63	65.589	ENSCANG00000041984	NOM1	88	66.602	Colobus_angolensis_palliatus
ENSORLG00000010541	nom1	83	57.307	ENSCGRG00001020293	Nom1	95	52.323	Cricetulus_griseus_chok1gshd
ENSORLG00000010541	nom1	63	65.511	ENSCGRG00000005405	Nom1	95	66.208	Cricetulus_griseus_crigri
ENSORLG00000010541	nom1	94	68.136	ENSCSEG00000000932	nom1	96	68.030	Cynoglossus_semilaevis
ENSORLG00000010541	nom1	98	71.890	ENSCVAG00000007562	nom1	99	71.871	Cyprinodon_variegatus
ENSORLG00000010541	nom1	100	62.603	ENSDARG00000060027	nom1	97	75.738	Danio_rerio
ENSORLG00000010541	nom1	63	54.563	ENSDORG00000015682	Nom1	97	48.551	Dipodomys_ordii
ENSORLG00000010541	nom1	59	38.614	FBgn0035336	CG9004	77	36.622	Drosophila_melanogaster
ENSORLG00000010541	nom1	74	56.635	ENSETEG00000003104	NOM1	86	57.524	Echinops_telfairi
ENSORLG00000010541	nom1	52	51.376	ENSEBUG00000010077	nom1	89	53.713	Eptatretus_burgeri
ENSORLG00000010541	nom1	83	59.424	ENSEASG00005001489	NOM1	94	53.349	Equus_asinus_asinus
ENSORLG00000010541	nom1	67	64.121	ENSECAG00000007596	NOM1	88	53.317	Equus_caballus
ENSORLG00000010541	nom1	67	77.636	ENSELUG00000006266	nom1	100	67.020	Esox_lucius
ENSORLG00000010541	nom1	83	56.936	ENSFCAG00000006467	NOM1	94	53.144	Felis_catus
ENSORLG00000010541	nom1	82	57.554	ENSFALG00000006904	NOM1	99	56.336	Ficedula_albicollis
ENSORLG00000010541	nom1	97	53.204	ENSFDAG00000016241	NOM1	96	51.578	Fukomys_damarensis
ENSORLG00000010541	nom1	98	71.117	ENSFHEG00000015974	nom1	99	71.377	Fundulus_heteroclitus
ENSORLG00000010541	nom1	94	60.656	ENSGMOG00000005129	nom1	100	61.646	Gadus_morhua
ENSORLG00000010541	nom1	81	56.975	ENSGALG00000006437	NOM1	61	65.589	Gallus_gallus
ENSORLG00000010541	nom1	98	70.205	ENSGAFG00000003211	nom1	99	70.036	Gambusia_affinis
ENSORLG00000010541	nom1	83	58.120	ENSGAGG00000014347	NOM1	64	67.300	Gopherus_agassizii
ENSORLG00000010541	nom1	98	52.669	ENSGGOG00000010920	NOM1	87	52.651	Gorilla_gorilla
ENSORLG00000010541	nom1	98	74.024	ENSHBUG00000014616	nom1	98	73.862	Haplochromis_burtoni
ENSORLG00000010541	nom1	98	52.438	ENSHGLG00000007392	NOM1	95	52.625	Heterocephalus_glaber_female
ENSORLG00000010541	nom1	86	66.879	ENSHGLG00100014407	NOM1	94	68.212	Heterocephalus_glaber_male
ENSORLG00000010541	nom1	63	72.381	ENSIPUG00000013980	nom1	98	59.085	Ictalurus_punctatus
ENSORLG00000010541	nom1	69	62.045	ENSSTOG00000031736	NOM1	89	67.451	Ictidomys_tridecemlineatus
ENSORLG00000010541	nom1	59	67.351	ENSJJAG00000011716	Nom1	96	68.134	Jaculus_jaculus
ENSORLG00000010541	nom1	98	72.071	ENSLBEG00000009252	nom1	100	72.261	Labrus_bergylta
ENSORLG00000010541	nom1	91	58.571	ENSLACG00000011777	NOM1	98	56.242	Latimeria_chalumnae
ENSORLG00000010541	nom1	98	62.394	ENSLOCG00000012452	nom1	100	62.169	Lepisosteus_oculatus
ENSORLG00000010541	nom1	97	47.889	ENSLAFG00000007119	NOM1	96	47.741	Loxodonta_africana
ENSORLG00000010541	nom1	98	50.881	ENSMMUG00000039033	NOM1	94	50.120	Macaca_mulatta
ENSORLG00000010541	nom1	63	65.970	ENSMLEG00000037062	NOM1	96	67.188	Mandrillus_leucophaeus
ENSORLG00000010541	nom1	100	72.052	ENSMAMG00000004118	nom1	100	70.843	Mastacembelus_armatus
ENSORLG00000010541	nom1	98	73.341	ENSMZEG00005000384	nom1	98	72.606	Maylandia_zebra
ENSORLG00000010541	nom1	84	57.326	ENSMGAG00000005051	NOM1	97	57.204	Meleagris_gallopavo
ENSORLG00000010541	nom1	98	53.511	ENSMAUG00000017988	Nom1	94	52.625	Mesocricetus_auratus
ENSORLG00000010541	nom1	66	62.523	ENSMICG00000017531	NOM1	94	52.088	Microcebus_murinus
ENSORLG00000010541	nom1	98	52.751	ENSMOCG00000015962	Nom1	94	52.913	Microtus_ochrogaster
ENSORLG00000010541	nom1	99	66.745	ENSMMOG00000004419	nom1	99	67.874	Mola_mola
ENSORLG00000010541	nom1	98	52.503	ENSMODG00000005177	NOM1	60	69.141	Monodelphis_domestica
ENSORLG00000010541	nom1	93	71.887	ENSMALG00000008800	nom1	99	71.338	Monopterus_albus
ENSORLG00000010541	nom1	98	51.559	MGP_CAROLIEiJ_G0027043	Nom1	93	51.562	Mus_caroli
ENSORLG00000010541	nom1	98	52.524	ENSMUSG00000001569	Nom1	93	51.683	Mus_musculus
ENSORLG00000010541	nom1	98	51.976	MGP_SPRETEiJ_G0028039	Nom1	93	52.038	Mus_spretus
ENSORLG00000010541	nom1	83	53.478	ENSMPUG00000009745	NOM1	98	54.203	Mustela_putorius_furo
ENSORLG00000010541	nom1	71	60.847	ENSMLUG00000009129	NOM1	88	64.650	Myotis_lucifugus
ENSORLG00000010541	nom1	98	73.798	ENSNBRG00000016429	nom1	95	84.688	Neolamprologus_brichardi
ENSORLG00000010541	nom1	98	52.262	ENSNLEG00000000238	NOM1	94	52.920	Nomascus_leucogenys
ENSORLG00000010541	nom1	71	54.481	ENSMEUG00000001108	NOM1	84	53.846	Notamacropus_eugenii
ENSORLG00000010541	nom1	54	53.722	ENSOPRG00000014676	NOM1	69	46.400	Ochotona_princeps
ENSORLG00000010541	nom1	82	56.686	ENSODEG00000009399	NOM1	73	65.430	Octodon_degus
ENSORLG00000010541	nom1	94	74.279	ENSONIG00000005958	nom1	100	74.937	Oreochromis_niloticus
ENSORLG00000010541	nom1	56	67.387	ENSOANG00000006139	-	97	67.826	Ornithorhynchus_anatinus
ENSORLG00000010541	nom1	96	43.921	ENSOCUG00000021448	-	97	53.565	Oryctolagus_cuniculus
ENSORLG00000010541	nom1	98	53.644	ENSOCUG00000004071	-	94	52.758	Oryctolagus_cuniculus
ENSORLG00000010541	nom1	93	98.307	ENSORLG00020010789	nom1	100	98.307	Oryzias_latipes_hni
ENSORLG00000010541	nom1	100	98.434	ENSORLG00015010475	nom1	100	98.438	Oryzias_latipes_hsok
ENSORLG00000010541	nom1	100	88.517	ENSOMEG00000004219	nom1	100	88.517	Oryzias_melastigma
ENSORLG00000010541	nom1	70	62.351	ENSOGAG00000001124	NOM1	84	67.773	Otolemur_garnettii
ENSORLG00000010541	nom1	82	54.062	ENSOARG00000007261	NOM1	71	63.774	Ovis_aries
ENSORLG00000010541	nom1	83	58.321	ENSPPAG00000041374	NOM1	94	53.584	Pan_paniscus
ENSORLG00000010541	nom1	83	56.710	ENSPTIG00000013532	NOM1	93	56.831	Panthera_tigris_altaica
ENSORLG00000010541	nom1	83	58.321	ENSPTRG00000019917	NOM1	94	53.012	Pan_troglodytes
ENSORLG00000010541	nom1	98	54.102	ENSPANG00000007605	NOM1	94	53.325	Papio_anubis
ENSORLG00000010541	nom1	100	58.649	ENSPKIG00000005825	nom1	100	58.873	Paramormyrops_kingsleyae
ENSORLG00000010541	nom1	70	64.187	ENSPSIG00000017848	NOM1	90	66.605	Pelodiscus_sinensis
ENSORLG00000010541	nom1	100	69.904	ENSPMGG00000002577	nom1	100	69.544	Periophthalmus_magnuspinnatus
ENSORLG00000010541	nom1	98	53.144	ENSPEMG00000024180	Nom1	93	53.091	Peromyscus_maniculatus_bairdii
ENSORLG00000010541	nom1	66	65.027	ENSPCIG00000027941	NOM1	77	57.103	Phascolarctos_cinereus
ENSORLG00000010541	nom1	100	70.616	ENSPFOG00000015771	nom1	100	71.021	Poecilia_formosa
ENSORLG00000010541	nom1	65	81.903	ENSPLAG00000007856	nom1	100	69.524	Poecilia_latipinna
ENSORLG00000010541	nom1	100	70.769	ENSPMEG00000014155	nom1	100	71.140	Poecilia_mexicana
ENSORLG00000010541	nom1	98	70.012	ENSPREG00000008850	nom1	99	70.764	Poecilia_reticulata
ENSORLG00000010541	nom1	98	50.000	ENSPPYG00000018222	NOM1	94	50.611	Pongo_abelii
ENSORLG00000010541	nom1	70	60.930	ENSPCAG00000000440	NOM1	79	60.930	Procavia_capensis
ENSORLG00000010541	nom1	64	64.540	ENSPCOG00000015222	NOM1	97	65.637	Propithecus_coquereli
ENSORLG00000010541	nom1	83	56.403	ENSPVAG00000014760	NOM1	94	50.845	Pteropus_vampyrus
ENSORLG00000010541	nom1	98	73.633	ENSPNYG00000006975	nom1	96	84.023	Pundamilia_nyererei
ENSORLG00000010541	nom1	67	70.962	ENSPNAG00000011085	nom1	99	56.160	Pygocentrus_nattereri
ENSORLG00000010541	nom1	98	50.780	ENSRNOG00000048969	AABR07059041.1	82	54.427	Rattus_norvegicus
ENSORLG00000010541	nom1	98	53.004	ENSRBIG00000037042	NOM1	94	53.148	Rhinopithecus_bieti
ENSORLG00000010541	nom1	98	52.768	ENSRROG00000037293	NOM1	94	52.906	Rhinopithecus_roxellana
ENSORLG00000010541	nom1	53	30.638	YLR336C	-	50	30.538	Saccharomyces_cerevisiae
ENSORLG00000010541	nom1	59	55.031	ENSSHAG00000002835	-	100	61.594	Sarcophilus_harrisii
ENSORLG00000010541	nom1	66	65.942	ENSSHAG00000017998	-	98	58.883	Sarcophilus_harrisii
ENSORLG00000010541	nom1	58	71.014	ENSSFOG00015003196	nom1	99	71.014	Scleropages_formosus
ENSORLG00000010541	nom1	100	71.529	ENSSMAG00000011047	nom1	100	70.979	Scophthalmus_maximus
ENSORLG00000010541	nom1	98	70.602	ENSSDUG00000006834	nom1	100	74.323	Seriola_dumerili
ENSORLG00000010541	nom1	64	84.240	ENSSLDG00000021812	nom1	100	73.081	Seriola_lalandi_dorsalis
ENSORLG00000010541	nom1	84	49.088	ENSSPUG00000002556	NOM1	97	54.459	Sphenodon_punctatus
ENSORLG00000010541	nom1	98	73.770	ENSSPAG00000000953	nom1	100	74.190	Stegastes_partitus
ENSORLG00000010541	nom1	82	57.267	ENSTGUG00000000702	-	99	56.879	Taeniopygia_guttata
ENSORLG00000010541	nom1	98	67.070	ENSTRUG00000010239	nom1	100	67.021	Takifugu_rubripes
ENSORLG00000010541	nom1	98	67.349	ENSTNIG00000012783	nom1	100	67.754	Tetraodon_nigroviridis
ENSORLG00000010541	nom1	96	52.005	ENSTTRG00000009691	NOM1	94	51.852	Tursiops_truncatus
ENSORLG00000010541	nom1	94	50.184	ENSUAMG00000025450	NOM1	94	50.296	Ursus_americanus
ENSORLG00000010541	nom1	83	57.576	ENSUMAG00000014275	NOM1	94	56.999	Ursus_maritimus
ENSORLG00000010541	nom1	83	55.556	ENSVVUG00000002608	NOM1	77	67.464	Vulpes_vulpes
ENSORLG00000010541	nom1	90	52.792	ENSXETG00000021611	nom1	82	69.756	Xenopus_tropicalis
ENSORLG00000010541	nom1	98	70.361	ENSXMAG00000002451	nom1	99	70.379	Xiphophorus_maculatus