EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000010586 (Gene tree)
Gene ID: 101173956
Gene Symbol: snrpd3l
Alias: -
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3138 bases
Position: chr12:16128593-16131730
Accession: 101173956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013270	LSM	PF01423.22	1.5e-15	1	1
ENSORLP00000030977	LSM	PF01423.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000034984	-	1553	-	ENSORLP00000030977	127 (aa)	-	UPI00022B11E8
ENSORLT00000013271	-	766	XM_023960650	ENSORLP00000013270	127 (aa)	XP_023816418	H2M4A6

Gene Model

Click here to download ENSORLG00000010586's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000010586	snrpd3l	95	31.579	ENSORLG00000008391	lsm4	75	34.259
ENSORLG00000010586	snrpd3l	65	31.325	ENSORLG00000012516	snrpd1	89	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010586	snrpd3l	100	99.213	ENSG00000100028	SNRPD3	100	99.213	Homo_sapiens
ENSORLG00000010586	snrpd3l	100	100.000	ENSAPOG00000007512	snrpd3l	100	100.000	Acanthochromis_polyacanthus
ENSORLG00000010586	snrpd3l	100	99.213	ENSAMEG00000013935	SNRPD3	100	99.213	Ailuropoda_melanoleuca
ENSORLG00000010586	snrpd3l	100	100.000	ENSACIG00000008871	snrpd3l	100	100.000	Amphilophus_citrinellus
ENSORLG00000010586	snrpd3l	100	100.000	ENSAOCG00000016743	snrpd3l	100	100.000	Amphiprion_ocellaris
ENSORLG00000010586	snrpd3l	100	100.000	ENSAOCG00000008497	SNRPD3	100	100.000	Amphiprion_ocellaris
ENSORLG00000010586	snrpd3l	83	100.000	ENSAOCG00000016759	-	98	100.000	Amphiprion_ocellaris
ENSORLG00000010586	snrpd3l	100	100.000	ENSAOCG00000022442	-	100	100.000	Amphiprion_ocellaris
ENSORLG00000010586	snrpd3l	83	100.000	ENSAPEG00000006260	-	98	100.000	Amphiprion_percula
ENSORLG00000010586	snrpd3l	100	100.000	ENSAPEG00000006273	snrpd3l	100	100.000	Amphiprion_percula
ENSORLG00000010586	snrpd3l	100	100.000	ENSATEG00000020556	snrpd3l	91	100.000	Anabas_testudineus
ENSORLG00000010586	snrpd3l	100	99.213	ENSAPLG00000008670	SNRPD3	100	99.213	Anas_platyrhynchos
ENSORLG00000010586	snrpd3l	100	99.213	ENSANAG00000026106	SNRPD3	100	99.213	Aotus_nancymaae
ENSORLG00000010586	snrpd3l	100	100.000	ENSACLG00000021295	snrpd3l	100	100.000	Astatotilapia_calliptera
ENSORLG00000010586	snrpd3l	100	96.875	ENSAMXG00000038984	snrpd3l	100	96.875	Astyanax_mexicanus
ENSORLG00000010586	snrpd3l	100	99.213	ENSBTAG00000021262	SNRPD3	100	99.213	Bos_taurus
ENSORLG00000010586	snrpd3l	94	61.600	WBGene00004914	snr-1	68	69.565	Caenorhabditis_elegans
ENSORLG00000010586	snrpd3l	100	99.213	ENSCJAG00000009630	SNRPD3	100	99.213	Callithrix_jacchus
ENSORLG00000010586	snrpd3l	100	98.425	ENSCAFG00000017258	-	100	98.425	Canis_familiaris
ENSORLG00000010586	snrpd3l	100	99.213	ENSCAFG00000013864	-	100	99.213	Canis_familiaris
ENSORLG00000010586	snrpd3l	100	99.213	ENSCAFG00020007165	-	100	99.213	Canis_lupus_dingo
ENSORLG00000010586	snrpd3l	100	99.213	ENSCHIG00000000057	SNRPD3	100	99.213	Capra_hircus
ENSORLG00000010586	snrpd3l	100	99.213	ENSTSYG00000007649	SNRPD3	100	99.213	Carlito_syrichta
ENSORLG00000010586	snrpd3l	100	99.213	ENSCAPG00000016432	-	100	99.213	Cavia_aperea
ENSORLG00000010586	snrpd3l	100	99.213	ENSCPOG00000033102	-	100	99.213	Cavia_porcellus
ENSORLG00000010586	snrpd3l	100	99.213	ENSCCAG00000035006	SNRPD3	100	99.213	Cebus_capucinus
ENSORLG00000010586	snrpd3l	100	99.213	ENSCATG00000038878	SNRPD3	100	99.213	Cercocebus_atys
ENSORLG00000010586	snrpd3l	100	99.213	ENSCLAG00000011403	SNRPD3	100	99.213	Chinchilla_lanigera
ENSORLG00000010586	snrpd3l	100	99.213	ENSCSAG00000010694	SNRPD3	100	99.213	Chlorocebus_sabaeus
ENSORLG00000010586	snrpd3l	100	99.213	ENSCPBG00000002065	SNRPD3	100	99.213	Chrysemys_picta_bellii
ENSORLG00000010586	snrpd3l	84	79.439	ENSCSAVG00000004708	-	80	79.439	Ciona_savignyi
ENSORLG00000010586	snrpd3l	100	99.213	ENSCANG00000032106	SNRPD3	100	99.213	Colobus_angolensis_palliatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSCGRG00001021990	Snrpd3	100	99.213	Cricetulus_griseus_chok1gshd
ENSORLG00000010586	snrpd3l	100	99.213	ENSCGRG00000004280	Snrpd3	100	99.213	Cricetulus_griseus_crigri
ENSORLG00000010586	snrpd3l	100	98.425	ENSCVAG00000001276	snrpd3l	100	98.425	Cyprinodon_variegatus
ENSORLG00000010586	snrpd3l	100	96.875	ENSDARG00000076283	snrpd3l	100	96.875	Danio_rerio
ENSORLG00000010586	snrpd3l	100	95.276	ENSDARG00000013800	snrpd3	100	95.276	Danio_rerio
ENSORLG00000010586	snrpd3l	100	99.213	ENSDNOG00000047424	-	100	99.213	Dasypus_novemcinctus
ENSORLG00000010586	snrpd3l	100	89.231	ENSDNOG00000018004	-	100	86.923	Dasypus_novemcinctus
ENSORLG00000010586	snrpd3l	97	77.236	ENSDNOG00000042638	-	100	74.797	Dasypus_novemcinctus
ENSORLG00000010586	snrpd3l	87	88.288	ENSDORG00000002800	-	100	87.387	Dipodomys_ordii
ENSORLG00000010586	snrpd3l	100	84.252	ENSDORG00000027706	-	100	81.890	Dipodomys_ordii
ENSORLG00000010586	snrpd3l	100	70.866	ENSDORG00000027169	-	100	70.079	Dipodomys_ordii
ENSORLG00000010586	snrpd3l	83	83.962	FBgn0023167	SmD3	71	83.178	Drosophila_melanogaster
ENSORLG00000010586	snrpd3l	100	99.213	ENSEASG00005000273	SNRPD3	100	99.213	Equus_asinus_asinus
ENSORLG00000010586	snrpd3l	100	99.213	ENSECAG00000023316	SNRPD3	100	99.213	Equus_caballus
ENSORLG00000010586	snrpd3l	100	97.638	ENSEEUG00000015518	SNRPD3	100	97.638	Erinaceus_europaeus
ENSORLG00000010586	snrpd3l	100	99.213	ENSELUG00000010092	snrpd3l	100	99.213	Esox_lucius
ENSORLG00000010586	snrpd3l	100	97.638	ENSELUG00000001854	snrpd3	100	97.638	Esox_lucius
ENSORLG00000010586	snrpd3l	100	99.213	ENSFCAG00000001512	SNRPD3	100	99.213	Felis_catus
ENSORLG00000010586	snrpd3l	100	99.213	ENSFALG00000007303	SNRPD3	100	99.213	Ficedula_albicollis
ENSORLG00000010586	snrpd3l	100	99.213	ENSFDAG00000010772	SNRPD3	100	99.213	Fukomys_damarensis
ENSORLG00000010586	snrpd3l	100	99.213	ENSFHEG00000010754	snrpd3l	100	99.213	Fundulus_heteroclitus
ENSORLG00000010586	snrpd3l	100	99.219	ENSGMOG00000008469	snrpd3l	100	99.219	Gadus_morhua
ENSORLG00000010586	snrpd3l	100	99.213	ENSGALG00000006596	SNRPD3	100	99.213	Gallus_gallus
ENSORLG00000010586	snrpd3l	83	100.000	ENSGAFG00000006661	snrpd3l	82	100.000	Gambusia_affinis
ENSORLG00000010586	snrpd3l	100	99.219	ENSGACG00000017533	snrpd3l	100	99.219	Gasterosteus_aculeatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSGAGG00000023325	SNRPD3	100	99.213	Gopherus_agassizii
ENSORLG00000010586	snrpd3l	100	99.213	ENSGGOG00000015640	SNRPD3	100	99.213	Gorilla_gorilla
ENSORLG00000010586	snrpd3l	100	100.000	ENSHBUG00000001332	snrpd3l	100	100.000	Haplochromis_burtoni
ENSORLG00000010586	snrpd3l	99	96.032	ENSHGLG00000009844	-	99	96.032	Heterocephalus_glaber_female
ENSORLG00000010586	snrpd3l	100	99.213	ENSHGLG00000016496	SNRPD3	100	99.213	Heterocephalus_glaber_female
ENSORLG00000010586	snrpd3l	99	96.032	ENSHGLG00100011326	-	99	96.032	Heterocephalus_glaber_male
ENSORLG00000010586	snrpd3l	100	99.213	ENSHGLG00100019304	SNRPD3	100	99.213	Heterocephalus_glaber_male
ENSORLG00000010586	snrpd3l	100	99.213	ENSHCOG00000014396	snrpd3l	100	99.213	Hippocampus_comes
ENSORLG00000010586	snrpd3l	100	96.875	ENSIPUG00000003083	snrpd3	100	96.875	Ictalurus_punctatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSSTOG00000025674	SNRPD3	100	99.213	Ictidomys_tridecemlineatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSJJAG00000013303	Snrpd3	100	99.213	Jaculus_jaculus
ENSORLG00000010586	snrpd3l	100	99.213	ENSKMAG00000012493	snrpd3l	100	99.213	Kryptolebias_marmoratus
ENSORLG00000010586	snrpd3l	100	100.000	ENSLBEG00000003202	snrpd3l	100	100.000	Labrus_bergylta
ENSORLG00000010586	snrpd3l	100	98.425	ENSLACG00000015192	SNRPD3	100	98.425	Latimeria_chalumnae
ENSORLG00000010586	snrpd3l	100	100.000	ENSLOCG00000006978	snrpd3	100	100.000	Lepisosteus_oculatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSLAFG00000028180	SNRPD3	100	99.213	Loxodonta_africana
ENSORLG00000010586	snrpd3l	100	99.213	ENSMFAG00000033628	SNRPD3	100	99.213	Macaca_fascicularis
ENSORLG00000010586	snrpd3l	100	99.213	ENSMMUG00000000264	SNRPD3	100	99.213	Macaca_mulatta
ENSORLG00000010586	snrpd3l	100	99.213	ENSMNEG00000020857	SNRPD3	100	99.213	Macaca_nemestrina
ENSORLG00000010586	snrpd3l	100	99.213	ENSMLEG00000037548	SNRPD3	100	99.213	Mandrillus_leucophaeus
ENSORLG00000010586	snrpd3l	100	100.000	ENSMZEG00005017664	snrpd3l	100	100.000	Maylandia_zebra
ENSORLG00000010586	snrpd3l	100	99.213	ENSMAUG00000021393	Snrpd3	100	99.213	Mesocricetus_auratus
ENSORLG00000010586	snrpd3l	100	99.213	ENSMICG00000034782	SNRPD3	100	99.213	Microcebus_murinus
ENSORLG00000010586	snrpd3l	100	99.213	ENSMOCG00000009361	Snrpd3	100	99.213	Microtus_ochrogaster
ENSORLG00000010586	snrpd3l	83	100.000	ENSMMOG00000020985	snrpd3l	67	100.000	Mola_mola
ENSORLG00000010586	snrpd3l	100	99.213	ENSMODG00000004024	SNRPD3	100	99.213	Monodelphis_domestica
ENSORLG00000010586	snrpd3l	100	100.000	ENSMALG00000013334	snrpd3l	100	100.000	Monopterus_albus
ENSORLG00000010586	snrpd3l	100	99.213	MGP_CAROLIEiJ_G0015441	Snrpd3	100	99.213	Mus_caroli
ENSORLG00000010586	snrpd3l	100	99.213	ENSMUSG00000020180	Snrpd3	100	99.213	Mus_musculus
ENSORLG00000010586	snrpd3l	100	99.213	MGP_PahariEiJ_G0030857	Snrpd3	100	99.213	Mus_pahari
ENSORLG00000010586	snrpd3l	100	99.213	MGP_SPRETEiJ_G0016254	Snrpd3	100	99.213	Mus_spretus
ENSORLG00000010586	snrpd3l	100	99.213	ENSMPUG00000002889	SNRPD3	100	99.213	Mustela_putorius_furo
ENSORLG00000010586	snrpd3l	100	99.213	ENSMLUG00000009838	SNRPD3	100	99.213	Myotis_lucifugus
ENSORLG00000010586	snrpd3l	100	99.213	ENSNGAG00000010328	Snrpd3	100	99.213	Nannospalax_galili
ENSORLG00000010586	snrpd3l	100	100.000	ENSNBRG00000020307	snrpd3l	100	100.000	Neolamprologus_brichardi
ENSORLG00000010586	snrpd3l	100	99.213	ENSNLEG00000035757	SNRPD3	100	99.213	Nomascus_leucogenys
ENSORLG00000010586	snrpd3l	100	99.213	ENSMEUG00000003772	SNRPD3	100	99.213	Notamacropus_eugenii
ENSORLG00000010586	snrpd3l	100	99.213	ENSOPRG00000005763	SNRPD3	100	99.213	Ochotona_princeps
ENSORLG00000010586	snrpd3l	100	96.063	ENSODEG00000020162	-	100	96.063	Octodon_degus
ENSORLG00000010586	snrpd3l	100	99.213	ENSODEG00000008064	-	100	99.213	Octodon_degus
ENSORLG00000010586	snrpd3l	100	98.425	ENSODEG00000019354	-	100	98.425	Octodon_degus
ENSORLG00000010586	snrpd3l	100	100.000	ENSONIG00000003828	snrpd3l	100	100.000	Oreochromis_niloticus
ENSORLG00000010586	snrpd3l	100	99.213	ENSOANG00000002463	SNRPD3	100	99.213	Ornithorhynchus_anatinus
ENSORLG00000010586	snrpd3l	100	99.213	ENSOCUG00000004845	SNRPD3	100	99.213	Oryctolagus_cuniculus
ENSORLG00000010586	snrpd3l	100	100.000	ENSORLG00020011769	snrpd3l	100	100.000	Oryzias_latipes_hni
ENSORLG00000010586	snrpd3l	100	100.000	ENSORLG00015022940	snrpd3l	100	100.000	Oryzias_latipes_hsok
ENSORLG00000010586	snrpd3l	100	99.213	ENSOMEG00000022734	snrpd3l	100	99.213	Oryzias_melastigma
ENSORLG00000010586	snrpd3l	100	99.213	ENSOGAG00000012708	SNRPD3	100	99.213	Otolemur_garnettii
ENSORLG00000010586	snrpd3l	100	99.213	ENSOARG00000013984	SNRPD3	100	99.213	Ovis_aries
ENSORLG00000010586	snrpd3l	100	99.213	ENSPPAG00000039191	SNRPD3	100	99.213	Pan_paniscus
ENSORLG00000010586	snrpd3l	100	99.213	ENSPPRG00000001470	SNRPD3	100	99.213	Panthera_pardus
ENSORLG00000010586	snrpd3l	100	99.213	ENSPTIG00000016610	SNRPD3	100	99.213	Panthera_tigris_altaica
ENSORLG00000010586	snrpd3l	100	99.213	ENSPTRG00000014176	SNRPD3	100	99.213	Pan_troglodytes
ENSORLG00000010586	snrpd3l	100	99.213	ENSPANG00000009279	SNRPD3	100	99.213	Papio_anubis
ENSORLG00000010586	snrpd3l	100	97.638	ENSPKIG00000006412	snrpd3l	100	97.638	Paramormyrops_kingsleyae
ENSORLG00000010586	snrpd3l	100	97.638	ENSPSIG00000010022	-	100	97.638	Pelodiscus_sinensis
ENSORLG00000010586	snrpd3l	98	96.774	ENSPMGG00000004486	snrpd3l	100	96.774	Periophthalmus_magnuspinnatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSPCIG00000010910	SNRPD3	84	99.213	Phascolarctos_cinereus
ENSORLG00000010586	snrpd3l	100	99.213	ENSPFOG00000019673	snrpd3l	100	99.213	Poecilia_formosa
ENSORLG00000010586	snrpd3l	100	99.213	ENSPLAG00000023249	snrpd3l	100	99.213	Poecilia_latipinna
ENSORLG00000010586	snrpd3l	100	99.213	ENSPMEG00000008482	snrpd3l	100	99.213	Poecilia_mexicana
ENSORLG00000010586	snrpd3l	97	89.431	ENSPREG00000007532	snrpd3l	98	89.431	Poecilia_reticulata
ENSORLG00000010586	snrpd3l	100	99.213	ENSPPYG00000011648	SNRPD3	100	99.213	Pongo_abelii
ENSORLG00000010586	snrpd3l	100	99.213	ENSPCAG00000002065	SNRPD3	100	99.213	Procavia_capensis
ENSORLG00000010586	snrpd3l	100	99.213	ENSPCOG00000011842	SNRPD3	100	99.213	Propithecus_coquereli
ENSORLG00000010586	snrpd3l	100	98.425	ENSPVAG00000011405	SNRPD3	100	98.425	Pteropus_vampyrus
ENSORLG00000010586	snrpd3l	100	100.000	ENSPNYG00000013344	snrpd3l	100	100.000	Pundamilia_nyererei
ENSORLG00000010586	snrpd3l	100	96.094	ENSPNAG00000008683	snrpd3l	100	96.094	Pygocentrus_nattereri
ENSORLG00000010586	snrpd3l	100	96.063	ENSPNAG00000010547	snrpd3	100	96.063	Pygocentrus_nattereri
ENSORLG00000010586	snrpd3l	100	99.213	ENSRNOG00000050410	Snrpd3	100	99.213	Rattus_norvegicus
ENSORLG00000010586	snrpd3l	100	99.213	ENSRBIG00000029017	SNRPD3	100	99.213	Rhinopithecus_bieti
ENSORLG00000010586	snrpd3l	100	99.213	ENSRROG00000031152	SNRPD3	100	99.213	Rhinopithecus_roxellana
ENSORLG00000010586	snrpd3l	75	47.368	YLR147C	SMD3	92	47.368	Saccharomyces_cerevisiae
ENSORLG00000010586	snrpd3l	100	97.638	ENSSFOG00015014180	snrpd3l	100	97.638	Scleropages_formosus
ENSORLG00000010586	snrpd3l	100	97.638	ENSSFOG00015007002	snrpd3l	100	97.638	Scleropages_formosus
ENSORLG00000010586	snrpd3l	100	100.000	ENSSMAG00000019307	snrpd3l	100	100.000	Scophthalmus_maximus
ENSORLG00000010586	snrpd3l	100	100.000	ENSSDUG00000006870	snrpd3l	100	100.000	Seriola_dumerili
ENSORLG00000010586	snrpd3l	100	100.000	ENSSLDG00000022664	snrpd3l	100	100.000	Seriola_lalandi_dorsalis
ENSORLG00000010586	snrpd3l	100	99.213	ENSSARG00000002357	SNRPD3	100	99.213	Sorex_araneus
ENSORLG00000010586	snrpd3l	100	98.425	ENSSPUG00000014285	SNRPD3	100	98.425	Sphenodon_punctatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSSSCG00000010058	SNRPD3	100	99.213	Sus_scrofa
ENSORLG00000010586	snrpd3l	100	99.213	ENSTGUG00000010079	SNRPD3	100	99.213	Taeniopygia_guttata
ENSORLG00000010586	snrpd3l	83	100.000	ENSTRUG00000023976	snrpd3l	90	100.000	Takifugu_rubripes
ENSORLG00000010586	snrpd3l	100	99.213	ENSTNIG00000005323	snrpd3l	100	99.213	Tetraodon_nigroviridis
ENSORLG00000010586	snrpd3l	100	99.213	ENSTBEG00000014334	SNRPD3	100	99.213	Tupaia_belangeri
ENSORLG00000010586	snrpd3l	100	99.213	ENSTTRG00000006022	SNRPD3	100	99.213	Tursiops_truncatus
ENSORLG00000010586	snrpd3l	100	99.213	ENSUAMG00000010767	SNRPD3	100	99.213	Ursus_americanus
ENSORLG00000010586	snrpd3l	100	99.213	ENSUMAG00000001670	SNRPD3	100	99.213	Ursus_maritimus
ENSORLG00000010586	snrpd3l	100	99.213	ENSVPAG00000000241	SNRPD3	100	99.213	Vicugna_pacos
ENSORLG00000010586	snrpd3l	83	100.000	ENSVVUG00000019340	SNRPD3	53	100.000	Vulpes_vulpes
ENSORLG00000010586	snrpd3l	100	78.295	ENSXETG00000024918	snrpd3	100	79.070	Xenopus_tropicalis
ENSORLG00000010586	snrpd3l	100	99.213	ENSXCOG00000004795	snrpd3l	100	99.213	Xiphophorus_couchianus
ENSORLG00000010586	snrpd3l	100	99.213	ENSXMAG00000001133	snrpd3l	100	99.213	Xiphophorus_maculatus