EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000010632 (Gene tree)
Gene ID: 101172991
Gene Symbol: vars2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 13250 bases
Position: chr11:21525190-21538439
Accession: 101172991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013333	tRNA-synt_1g	PF09334.11	5.9e-14	1	1
ENSORLP00000013333	Anticodon_1	PF08264.13	2.4e-36	1	1
ENSORLP00000013333	tRNA-synt_1	PF00133.22	4.3e-191	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013334	-	3270	XM_023960075	ENSORLP00000013333	1089 (aa)	XP_023815843	H2M4G5

Gene Model

Click here to download ENSORLG00000010632's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000010632	vars2	95	49.001	ENSORLG00000013063	vars	78	49.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010632	vars2	95	75.553	ENSAPOG00000007396	vars2	99	73.757	Acanthochromis_polyacanthus
ENSORLG00000010632	vars2	95	51.231	ENSAMEG00000012997	VARS2	90	52.334	Ailuropoda_melanoleuca
ENSORLG00000010632	vars2	99	72.861	ENSACIG00000004344	vars2	95	75.617	Amphilophus_citrinellus
ENSORLG00000010632	vars2	95	75.553	ENSAOCG00000000476	vars2	95	75.586	Amphiprion_ocellaris
ENSORLG00000010632	vars2	95	75.457	ENSAPEG00000008646	vars2	92	75.586	Amphiprion_percula
ENSORLG00000010632	vars2	96	76.369	ENSATEG00000012291	vars2	94	76.870	Anabas_testudineus
ENSORLG00000010632	vars2	95	52.567	ENSACAG00000022093	VARS2	91	53.823	Anolis_carolinensis
ENSORLG00000010632	vars2	94	51.336	ENSANAG00000038018	VARS2	92	52.329	Aotus_nancymaae
ENSORLG00000010632	vars2	99	72.560	ENSACLG00000018673	vars2	99	72.560	Astatotilapia_calliptera
ENSORLG00000010632	vars2	96	67.081	ENSAMXG00000017773	vars2	92	70.276	Astyanax_mexicanus
ENSORLG00000010632	vars2	97	51.272	ENSBTAG00000010698	VARS2	92	52.423	Bos_taurus
ENSORLG00000010632	vars2	94	51.431	ENSCJAG00000019826	VARS2	92	52.273	Callithrix_jacchus
ENSORLG00000010632	vars2	94	52.947	ENSCAFG00000000454	VARS2	90	53.846	Canis_familiaris
ENSORLG00000010632	vars2	85	56.317	ENSCAFG00020019387	VARS2	90	56.818	Canis_lupus_dingo
ENSORLG00000010632	vars2	94	51.675	ENSCHIG00000007847	VARS2	92	52.731	Capra_hircus
ENSORLG00000010632	vars2	95	51.845	ENSTSYG00000009904	VARS2	92	53.128	Carlito_syrichta
ENSORLG00000010632	vars2	88	52.296	ENSCAPG00000017770	VARS2	99	52.296	Cavia_aperea
ENSORLG00000010632	vars2	97	50.470	ENSCPOG00000021834	VARS2	92	51.921	Cavia_porcellus
ENSORLG00000010632	vars2	94	51.527	ENSCCAG00000037907	VARS2	92	52.626	Cebus_capucinus
ENSORLG00000010632	vars2	94	51.527	ENSCATG00000032554	VARS2	92	52.626	Cercocebus_atys
ENSORLG00000010632	vars2	95	51.275	ENSCLAG00000002889	VARS2	93	52.311	Chinchilla_lanigera
ENSORLG00000010632	vars2	94	51.625	ENSCSAG00000008327	VARS2	92	52.924	Chlorocebus_sabaeus
ENSORLG00000010632	vars2	91	55.287	ENSCPBG00000021502	VARS2	96	55.287	Chrysemys_picta_bellii
ENSORLG00000010632	vars2	94	51.336	ENSCANG00000014991	VARS2	92	52.428	Colobus_angolensis_palliatus
ENSORLG00000010632	vars2	96	51.760	ENSCGRG00001021535	Vars2	92	52.918	Cricetulus_griseus_chok1gshd
ENSORLG00000010632	vars2	96	51.760	ENSCGRG00000014112	Vars2	92	52.918	Cricetulus_griseus_crigri
ENSORLG00000010632	vars2	99	61.602	ENSCSEG00000015432	vars2	86	81.290	Cynoglossus_semilaevis
ENSORLG00000010632	vars2	65	75.634	ENSCVAG00000017765	vars2	98	75.634	Cyprinodon_variegatus
ENSORLG00000010632	vars2	99	64.733	ENSDARG00000056717	vars2	94	67.493	Danio_rerio
ENSORLG00000010632	vars2	80	49.829	ENSDORG00000008516	Vars2	93	49.829	Dipodomys_ordii
ENSORLG00000010632	vars2	95	45.910	ENSETEG00000014844	VARS2	93	46.033	Echinops_telfairi
ENSORLG00000010632	vars2	95	51.418	ENSEASG00005019997	VARS2	94	55.399	Equus_asinus_asinus
ENSORLG00000010632	vars2	95	51.890	ENSECAG00000018202	VARS2	92	53.128	Equus_caballus
ENSORLG00000010632	vars2	99	66.300	ENSELUG00000017824	vars2	94	67.899	Esox_lucius
ENSORLG00000010632	vars2	95	51.326	ENSFCAG00000010531	VARS2	92	52.731	Felis_catus
ENSORLG00000010632	vars2	96	50.997	ENSFDAG00000017216	VARS2	92	52.118	Fukomys_damarensis
ENSORLG00000010632	vars2	93	68.442	ENSFHEG00000013932	vars2	98	68.442	Fundulus_heteroclitus
ENSORLG00000010632	vars2	90	66.905	ENSGMOG00000018960	vars2	99	66.905	Gadus_morhua
ENSORLG00000010632	vars2	96	73.212	ENSGAFG00000004737	vars2	92	73.212	Gambusia_affinis
ENSORLG00000010632	vars2	93	73.142	ENSGACG00000001464	vars2	99	73.069	Gasterosteus_aculeatus
ENSORLG00000010632	vars2	91	55.833	ENSGAGG00000011652	VARS2	99	55.833	Gopherus_agassizii
ENSORLG00000010632	vars2	94	51.431	ENSGGOG00000014587	VARS2	94	52.102	Gorilla_gorilla
ENSORLG00000010632	vars2	99	70.138	ENSHBUG00000002448	vars2	94	74.390	Haplochromis_burtoni
ENSORLG00000010632	vars2	96	51.619	ENSHGLG00000012886	VARS2	90	52.148	Heterocephalus_glaber_female
ENSORLG00000010632	vars2	96	51.524	ENSHGLG00100016535	VARS2	93	52.051	Heterocephalus_glaber_male
ENSORLG00000010632	vars2	67	73.469	ENSHCOG00000017907	vars2	97	73.469	Hippocampus_comes
ENSORLG00000010632	vars2	92	68.087	ENSIPUG00000015573	Vars2	93	68.087	Ictalurus_punctatus
ENSORLG00000010632	vars2	96	50.954	ENSSTOG00000009924	VARS2	92	51.976	Ictidomys_tridecemlineatus
ENSORLG00000010632	vars2	93	52.884	ENSJJAG00000011144	Vars2	92	53.320	Jaculus_jaculus
ENSORLG00000010632	vars2	99	72.869	ENSKMAG00000001393	vars2	99	72.961	Kryptolebias_marmoratus
ENSORLG00000010632	vars2	51	78.261	ENSLBEG00000005480	-	81	78.261	Labrus_bergylta
ENSORLG00000010632	vars2	99	70.540	ENSLBEG00000011949	vars2	99	70.540	Labrus_bergylta
ENSORLG00000010632	vars2	95	50.568	ENSLACG00000001576	-	97	50.818	Latimeria_chalumnae
ENSORLG00000010632	vars2	97	51.464	ENSLAFG00000015183	VARS2	93	52.148	Loxodonta_africana
ENSORLG00000010632	vars2	94	51.622	ENSMFAG00000042367	VARS2	92	52.725	Macaca_fascicularis
ENSORLG00000010632	vars2	94	51.813	ENSMMUG00000018609	VARS2	92	52.924	Macaca_mulatta
ENSORLG00000010632	vars2	94	51.527	ENSMNEG00000043163	VARS2	92	52.626	Macaca_nemestrina
ENSORLG00000010632	vars2	94	51.622	ENSMLEG00000041728	VARS2	90	52.725	Mandrillus_leucophaeus
ENSORLG00000010632	vars2	95	74.013	ENSMAMG00000020339	vars2	94	74.581	Mastacembelus_armatus
ENSORLG00000010632	vars2	99	72.468	ENSMZEG00005017669	vars2	99	72.468	Maylandia_zebra
ENSORLG00000010632	vars2	97	51.921	ENSMAUG00000018946	Vars2	93	52.838	Mesocricetus_auratus
ENSORLG00000010632	vars2	79	56.502	ENSMICG00000005365	VARS2	92	57.964	Microcebus_murinus
ENSORLG00000010632	vars2	90	57.322	ENSMOCG00000014607	Vars2	93	59.363	Microtus_ochrogaster
ENSORLG00000010632	vars2	93	73.663	ENSMMOG00000012122	vars2	94	73.663	Mola_mola
ENSORLG00000010632	vars2	93	51.315	ENSMODG00000015848	VARS2	89	52.439	Monodelphis_domestica
ENSORLG00000010632	vars2	93	73.617	ENSMALG00000009217	vars2	99	73.617	Monopterus_albus
ENSORLG00000010632	vars2	94	52.047	MGP_CAROLIEiJ_G0021529	Vars2	97	54.922	Mus_caroli
ENSORLG00000010632	vars2	94	51.754	ENSMUSG00000038838	Vars2	98	54.545	Mus_musculus
ENSORLG00000010632	vars2	94	51.852	MGP_PahariEiJ_G0020523	Vars2	96	54.688	Mus_pahari
ENSORLG00000010632	vars2	97	51.034	MGP_SPRETEiJ_G0022436	Vars2	97	54.750	Mus_spretus
ENSORLG00000010632	vars2	95	51.989	ENSMPUG00000011643	VARS2	92	53.175	Mustela_putorius_furo
ENSORLG00000010632	vars2	92	52.522	ENSMLUG00000002356	VARS2	86	53.751	Myotis_lucifugus
ENSORLG00000010632	vars2	99	46.501	ENSNGAG00000020607	Vars2	91	48.951	Nannospalax_galili
ENSORLG00000010632	vars2	62	66.760	ENSNBRG00000001624	vars2	58	66.760	Neolamprologus_brichardi
ENSORLG00000010632	vars2	95	50.766	ENSNLEG00000005625	VARS2	91	51.584	Nomascus_leucogenys
ENSORLG00000010632	vars2	77	56.500	ENSMEUG00000014475	VARS2	89	56.500	Notamacropus_eugenii
ENSORLG00000010632	vars2	87	52.217	ENSOPRG00000000682	VARS2	82	60.526	Ochotona_princeps
ENSORLG00000010632	vars2	93	51.076	ENSODEG00000017965	VARS2	89	52.518	Octodon_degus
ENSORLG00000010632	vars2	93	55.078	ENSONIG00000004734	vars2	99	55.078	Oreochromis_niloticus
ENSORLG00000010632	vars2	69	44.489	ENSOANG00000000398	-	89	44.489	Ornithorhynchus_anatinus
ENSORLG00000010632	vars2	97	48.375	ENSOCUG00000021496	VARS2	59	49.951	Oryctolagus_cuniculus
ENSORLG00000010632	vars2	100	97.612	ENSORLG00020018584	vars2	100	97.612	Oryzias_latipes_hni
ENSORLG00000010632	vars2	100	97.062	ENSORLG00015010408	vars2	100	97.062	Oryzias_latipes_hsok
ENSORLG00000010632	vars2	100	91.276	ENSOMEG00000008360	vars2	100	91.276	Oryzias_melastigma
ENSORLG00000010632	vars2	94	51.820	ENSOGAG00000006087	VARS2	90	52.871	Otolemur_garnettii
ENSORLG00000010632	vars2	95	50.851	ENSOARG00000010844	VARS2	91	51.984	Ovis_aries
ENSORLG00000010632	vars2	94	51.527	ENSPPAG00000041141	VARS2	94	52.102	Pan_paniscus
ENSORLG00000010632	vars2	95	51.226	ENSPPRG00000006751	VARS2	90	52.527	Panthera_pardus
ENSORLG00000010632	vars2	95	51.132	ENSPTIG00000017799	VARS2	97	52.433	Panthera_tigris_altaica
ENSORLG00000010632	vars2	94	51.527	ENSPTRG00000034497	VARS2	94	52.102	Pan_troglodytes
ENSORLG00000010632	vars2	94	51.813	ENSPANG00000018481	VARS2	92	54.162	Papio_anubis
ENSORLG00000010632	vars2	96	65.673	ENSPKIG00000011372	vars2	93	66.568	Paramormyrops_kingsleyae
ENSORLG00000010632	vars2	58	63.365	ENSPSIG00000006206	VARS2	92	63.101	Pelodiscus_sinensis
ENSORLG00000010632	vars2	96	68.601	ENSPMGG00000000465	vars2	94	70.553	Periophthalmus_magnuspinnatus
ENSORLG00000010632	vars2	97	51.512	ENSPEMG00000014691	Vars2	93	52.446	Peromyscus_maniculatus_bairdii
ENSORLG00000010632	vars2	94	51.265	ENSPCIG00000015040	VARS2	91	51.944	Phascolarctos_cinereus
ENSORLG00000010632	vars2	94	72.639	ENSPFOG00000017616	vars2	94	72.568	Poecilia_formosa
ENSORLG00000010632	vars2	99	70.965	ENSPLAG00000019778	vars2	95	72.710	Poecilia_latipinna
ENSORLG00000010632	vars2	99	70.534	ENSPMEG00000011123	vars2	95	72.515	Poecilia_mexicana
ENSORLG00000010632	vars2	90	66.870	ENSPREG00000014998	vars2	93	66.870	Poecilia_reticulata
ENSORLG00000010632	vars2	96	51.189	ENSPPYG00000016424	VARS2	93	51.852	Pongo_abelii
ENSORLG00000010632	vars2	63	53.833	ENSPCAG00000006946	VARS2	76	53.833	Procavia_capensis
ENSORLG00000010632	vars2	96	50.810	ENSPCOG00000014839	VARS2	90	51.772	Propithecus_coquereli
ENSORLG00000010632	vars2	97	50.377	ENSPVAG00000004197	VARS2	92	51.731	Pteropus_vampyrus
ENSORLG00000010632	vars2	86	79.292	ENSPNYG00000010314	vars2	99	79.292	Pundamilia_nyererei
ENSORLG00000010632	vars2	99	65.325	ENSPNAG00000026793	vars2	93	68.083	Pygocentrus_nattereri
ENSORLG00000010632	vars2	96	49.810	ENSRNOG00000000833	Vars2	93	50.836	Rattus_norvegicus
ENSORLG00000010632	vars2	94	51.431	ENSRBIG00000032725	VARS2	92	52.527	Rhinopithecus_bieti
ENSORLG00000010632	vars2	94	51.336	ENSRROG00000043847	VARS2	92	52.428	Rhinopithecus_roxellana
ENSORLG00000010632	vars2	94	50.561	ENSSBOG00000033240	VARS2	90	51.503	Saimiri_boliviensis_boliviensis
ENSORLG00000010632	vars2	97	50.658	ENSSHAG00000009307	VARS2	92	51.972	Sarcophilus_harrisii
ENSORLG00000010632	vars2	96	66.380	ENSSFOG00015016187	vars2	94	67.057	Scleropages_formosus
ENSORLG00000010632	vars2	99	72.007	ENSSMAG00000020842	vars2	99	72.007	Scophthalmus_maximus
ENSORLG00000010632	vars2	99	74.309	ENSSDUG00000011598	vars2	99	74.494	Seriola_dumerili
ENSORLG00000010632	vars2	91	76.566	ENSSLDG00000015492	vars2	92	76.566	Seriola_lalandi_dorsalis
ENSORLG00000010632	vars2	78	59.298	ENSSPUG00000014700	VARS2	87	59.298	Sphenodon_punctatus
ENSORLG00000010632	vars2	99	71.311	ENSSPAG00000004654	vars2	99	71.311	Stegastes_partitus
ENSORLG00000010632	vars2	94	52.008	ENSSSCG00000001384	VARS2	92	55.556	Sus_scrofa
ENSORLG00000010632	vars2	93	71.022	ENSTRUG00000005264	vars2	94	71.022	Takifugu_rubripes
ENSORLG00000010632	vars2	96	68.260	ENSTNIG00000005916	vars2	94	68.683	Tetraodon_nigroviridis
ENSORLG00000010632	vars2	81	51.500	ENSTTRG00000012243	VARS2	79	60.667	Tursiops_truncatus
ENSORLG00000010632	vars2	93	52.311	ENSUAMG00000026124	VARS2	95	54.000	Ursus_americanus
ENSORLG00000010632	vars2	93	52.362	ENSUMAG00000019894	VARS2	89	53.671	Ursus_maritimus
ENSORLG00000010632	vars2	94	52.754	ENSVVUG00000010754	VARS2	86	53.644	Vulpes_vulpes
ENSORLG00000010632	vars2	88	50.769	ENSXETG00000003036	vars2	99	50.769	Xenopus_tropicalis
ENSORLG00000010632	vars2	97	72.306	ENSXCOG00000003455	vars2	94	75.458	Xiphophorus_couchianus
ENSORLG00000010632	vars2	99	72.217	ENSXMAG00000013523	vars2	95	74.391	Xiphophorus_maculatus