EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000010761 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1502 bases
Position: chr22:3081122-3082623
Accession: 101162086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013496	RRM_1	PF00076.22	5.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013497	-	634	XM_011490140	ENSORLP00000013496	129 (aa)	XP_011488442	H2M4X4

Gene Model

Click here to download ENSORLG00000010761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000010761	slirp	71	30.208	ENSORLG00000005327	hnrnpaba	52	30.208
ENSORLG00000010761	slirp	68	34.118	ENSORLG00000001833	hnrnpd	59	34.118
ENSORLG00000010761	slirp	71	30.526	ENSORLG00000026044	hnrnpabb	54	30.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010761	slirp	64	55.422	ENSG00000119705	SLIRP	92	57.143	Homo_sapiens
ENSORLG00000010761	slirp	78	82.000	ENSAPOG00000001298	slirp	100	82.000	Acanthochromis_polyacanthus
ENSORLG00000010761	slirp	54	57.143	ENSAMEG00000003975	SLIRP	77	57.143	Ailuropoda_melanoleuca
ENSORLG00000010761	slirp	76	81.633	ENSACIG00000023083	slirp	97	81.633	Amphilophus_citrinellus
ENSORLG00000010761	slirp	76	81.633	ENSAOCG00000006342	slirp	99	81.633	Amphiprion_ocellaris
ENSORLG00000010761	slirp	75	81.443	ENSAPEG00000015719	-	99	81.443	Amphiprion_percula
ENSORLG00000010761	slirp	76	81.633	ENSAPEG00000015917	slirp	99	81.633	Amphiprion_percula
ENSORLG00000010761	slirp	78	77.000	ENSATEG00000013525	slirp	100	77.000	Anabas_testudineus
ENSORLG00000010761	slirp	76	62.245	ENSAMXG00000018693	slirp	98	62.245	Astyanax_mexicanus
ENSORLG00000010761	slirp	57	59.459	ENSCJAG00000016946	SLIRP	72	58.209	Callithrix_jacchus
ENSORLG00000010761	slirp	68	53.333	ENSCAFG00020015876	-	81	53.333	Canis_lupus_dingo
ENSORLG00000010761	slirp	68	52.273	ENSCCAG00000030130	SLIRP	81	52.273	Cebus_capucinus
ENSORLG00000010761	slirp	59	56.579	ENSCATG00000036327	SLIRP	72	58.209	Cercocebus_atys
ENSORLG00000010761	slirp	69	53.933	ENSCSAG00000011736	SLIRP	80	53.933	Chlorocebus_sabaeus
ENSORLG00000010761	slirp	66	61.176	ENSCPBG00000026327	SLIRP	86	61.176	Chrysemys_picta_bellii
ENSORLG00000010761	slirp	52	61.194	ENSCANG00000032892	SLIRP	68	61.194	Colobus_angolensis_palliatus
ENSORLG00000010761	slirp	80	43.810	ENSCGRG00001024068	Slirp	95	43.810	Cricetulus_griseus_chok1gshd
ENSORLG00000010761	slirp	80	43.810	ENSCGRG00000017440	Slirp	95	43.810	Cricetulus_griseus_crigri
ENSORLG00000010761	slirp	65	63.095	ENSCSEG00000015766	slirp	86	63.095	Cynoglossus_semilaevis
ENSORLG00000010761	slirp	70	74.444	ENSCVAG00000012504	slirp	86	74.444	Cyprinodon_variegatus
ENSORLG00000010761	slirp	74	75.789	ENSDARG00000097753	slirp	98	74.257	Danio_rerio
ENSORLG00000010761	slirp	67	47.126	ENSDNOG00000007721	SLIRP	78	47.126	Dasypus_novemcinctus
ENSORLG00000010761	slirp	68	48.315	ENSDORG00000012379	Slirp	80	48.315	Dipodomys_ordii
ENSORLG00000010761	slirp	68	50.000	ENSETEG00000010345	SLIRP	81	50.000	Echinops_telfairi
ENSORLG00000010761	slirp	69	55.056	ENSEASG00005020193	SLIRP	80	55.056	Equus_asinus_asinus
ENSORLG00000010761	slirp	68	48.315	ENSEEUG00000007257	SLIRP	88	48.315	Erinaceus_europaeus
ENSORLG00000010761	slirp	75	76.289	ENSELUG00000016800	slirp	96	76.289	Esox_lucius
ENSORLG00000010761	slirp	52	61.194	ENSFCAG00000036326	SLIRP	68	61.194	Felis_catus
ENSORLG00000010761	slirp	60	55.128	ENSFALG00000012583	SLIRP	80	54.118	Ficedula_albicollis
ENSORLG00000010761	slirp	66	54.023	ENSFDAG00000008347	SLIRP	77	54.023	Fukomys_damarensis
ENSORLG00000010761	slirp	62	77.500	ENSFHEG00000004709	slirp	87	77.500	Fundulus_heteroclitus
ENSORLG00000010761	slirp	75	74.227	ENSGMOG00000016948	slirp	93	74.227	Gadus_morhua
ENSORLG00000010761	slirp	71	51.064	ENSGALG00000031238	SLIRP	95	51.064	Gallus_gallus
ENSORLG00000010761	slirp	78	75.000	ENSGAFG00000010998	slirp	100	75.000	Gambusia_affinis
ENSORLG00000010761	slirp	64	80.488	ENSGACG00000020137	slirp	95	80.488	Gasterosteus_aculeatus
ENSORLG00000010761	slirp	72	63.830	ENSGAGG00000009953	SLIRP	65	63.830	Gopherus_agassizii
ENSORLG00000010761	slirp	64	55.422	ENSGGOG00000011059	-	72	58.209	Gorilla_gorilla
ENSORLG00000010761	slirp	69	48.315	ENSHGLG00000018491	SLIRP	80	48.315	Heterocephalus_glaber_female
ENSORLG00000010761	slirp	69	48.315	ENSHGLG00100014153	SLIRP	80	48.315	Heterocephalus_glaber_male
ENSORLG00000010761	slirp	74	78.125	ENSHCOG00000006795	slirp	97	78.125	Hippocampus_comes
ENSORLG00000010761	slirp	76	75.510	ENSIPUG00000010214	SLIRP	98	75.510	Ictalurus_punctatus
ENSORLG00000010761	slirp	69	51.685	ENSSTOG00000034316	SLIRP	80	51.685	Ictidomys_tridecemlineatus
ENSORLG00000010761	slirp	78	68.000	ENSKMAG00000002038	slirp	96	68.000	Kryptolebias_marmoratus
ENSORLG00000010761	slirp	78	70.000	ENSLBEG00000007564	slirp	100	70.000	Labrus_bergylta
ENSORLG00000010761	slirp	75	71.134	ENSLACG00000013434	SLIRP	93	71.134	Latimeria_chalumnae
ENSORLG00000010761	slirp	57	56.757	ENSMFAG00000042960	SLIRP	72	58.209	Macaca_fascicularis
ENSORLG00000010761	slirp	67	54.023	ENSMMUG00000029256	SLIRP	72	58.209	Macaca_mulatta
ENSORLG00000010761	slirp	57	56.757	ENSMNEG00000028921	SLIRP	72	58.209	Macaca_nemestrina
ENSORLG00000010761	slirp	67	51.724	ENSMLEG00000043644	SLIRP	76	51.724	Mandrillus_leucophaeus
ENSORLG00000010761	slirp	76	86.735	ENSMZEG00005004617	slirp	99	86.735	Maylandia_zebra
ENSORLG00000010761	slirp	69	48.315	ENSMAUG00000003857	Slirp	80	48.315	Mesocricetus_auratus
ENSORLG00000010761	slirp	69	52.809	ENSMICG00000012080	SLIRP	79	52.809	Microcebus_murinus
ENSORLG00000010761	slirp	67	49.425	ENSMOCG00000016019	Slirp	78	49.425	Microtus_ochrogaster
ENSORLG00000010761	slirp	78	89.000	ENSMMOG00000018268	slirp	100	89.000	Mola_mola
ENSORLG00000010761	slirp	54	54.286	ENSMODG00000005207	-	99	54.286	Monodelphis_domestica
ENSORLG00000010761	slirp	78	72.000	ENSMALG00000012581	slirp	100	72.000	Monopterus_albus
ENSORLG00000010761	slirp	57	55.405	MGP_CAROLIEiJ_G0017995	Slirp	69	55.405	Mus_caroli
ENSORLG00000010761	slirp	68	49.438	ENSMUSG00000021040	Slirp	79	49.438	Mus_musculus
ENSORLG00000010761	slirp	81	45.714	MGP_SPRETEiJ_G0018840	Slirp	93	45.714	Mus_spretus
ENSORLG00000010761	slirp	68	54.545	ENSMLUG00000024998	-	96	51.376	Myotis_lucifugus
ENSORLG00000010761	slirp	77	52.525	ENSMLUG00000029544	-	76	57.471	Myotis_lucifugus
ENSORLG00000010761	slirp	57	52.703	ENSNGAG00000016363	Slirp	71	52.703	Nannospalax_galili
ENSORLG00000010761	slirp	70	48.889	ENSNLEG00000032459	-	81	48.889	Nomascus_leucogenys
ENSORLG00000010761	slirp	70	47.778	ENSNLEG00000027238	-	84	47.778	Nomascus_leucogenys
ENSORLG00000010761	slirp	68	50.000	ENSODEG00000012580	SLIRP	76	54.286	Octodon_degus
ENSORLG00000010761	slirp	76	85.714	ENSONIG00000011692	slirp	99	85.714	Oreochromis_niloticus
ENSORLG00000010761	slirp	58	61.333	ENSOANG00000022366	SLIRP	68	61.333	Ornithorhynchus_anatinus
ENSORLG00000010761	slirp	78	99.000	ENSORLG00020022188	slirp	100	99.000	Oryzias_latipes_hni
ENSORLG00000010761	slirp	77	97.980	ENSORLG00015020171	slirp	98	97.980	Oryzias_latipes_hsok
ENSORLG00000010761	slirp	78	94.000	ENSOMEG00000019321	slirp	100	94.000	Oryzias_melastigma
ENSORLG00000010761	slirp	64	55.422	ENSPPAG00000040710	-	75	55.422	Pan_paniscus
ENSORLG00000010761	slirp	52	61.194	ENSPPRG00000014350	SLIRP	68	61.194	Panthera_pardus
ENSORLG00000010761	slirp	52	61.194	ENSPTIG00000014196	SLIRP	68	61.194	Panthera_tigris_altaica
ENSORLG00000010761	slirp	64	55.422	ENSPTRG00000030691	SLIRP	76	56.098	Pan_troglodytes
ENSORLG00000010761	slirp	57	58.108	ENSPANG00000026323	SLIRP	72	59.701	Papio_anubis
ENSORLG00000010761	slirp	51	71.212	ENSPKIG00000008831	slirp	65	71.212	Paramormyrops_kingsleyae
ENSORLG00000010761	slirp	62	78.750	ENSPMGG00000010541	slirp	92	78.750	Periophthalmus_magnuspinnatus
ENSORLG00000010761	slirp	55	53.521	ENSPEMG00000013234	Slirp	69	51.429	Peromyscus_maniculatus_bairdii
ENSORLG00000010761	slirp	66	54.118	ENSPMAG00000009355	slirp	94	54.118	Petromyzon_marinus
ENSORLG00000010761	slirp	61	48.101	ENSPCIG00000026842	-	85	48.101	Phascolarctos_cinereus
ENSORLG00000010761	slirp	77	73.737	ENSPFOG00000006758	slirp	99	73.737	Poecilia_formosa
ENSORLG00000010761	slirp	77	74.747	ENSPLAG00000011140	slirp	99	74.747	Poecilia_latipinna
ENSORLG00000010761	slirp	77	73.737	ENSPMEG00000019535	slirp	99	73.737	Poecilia_mexicana
ENSORLG00000010761	slirp	77	73.737	ENSPREG00000011673	slirp	99	73.737	Poecilia_reticulata
ENSORLG00000010761	slirp	57	56.757	ENSPPYG00000006030	SLIRP	68	56.757	Pongo_abelii
ENSORLG00000010761	slirp	59	57.895	ENSPCOG00000015159	SLIRP	67	56.944	Propithecus_coquereli
ENSORLG00000010761	slirp	76	77.551	ENSPNAG00000008633	slirp	99	77.551	Pygocentrus_nattereri
ENSORLG00000010761	slirp	68	54.545	ENSRBIG00000032222	-	81	54.545	Rhinopithecus_bieti
ENSORLG00000010761	slirp	52	58.209	ENSRBIG00000032998	-	62	58.209	Rhinopithecus_bieti
ENSORLG00000010761	slirp	50	60.000	ENSRBIG00000031396	-	65	60.000	Rhinopithecus_bieti
ENSORLG00000010761	slirp	66	50.588	ENSRBIG00000035817	-	68	54.054	Rhinopithecus_bieti
ENSORLG00000010761	slirp	52	59.701	ENSRROG00000017133	-	70	59.701	Rhinopithecus_roxellana
ENSORLG00000010761	slirp	68	54.545	ENSRROG00000036656	-	81	54.545	Rhinopithecus_roxellana
ENSORLG00000010761	slirp	55	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSORLG00000010761	slirp	50	61.538	ENSRROG00000035604	-	65	61.538	Rhinopithecus_roxellana
ENSORLG00000010761	slirp	52	59.701	ENSSBOG00000020014	SLIRP	72	59.701	Saimiri_boliviensis_boliviensis
ENSORLG00000010761	slirp	76	63.265	ENSSFOG00015011165	slirp	98	63.265	Scleropages_formosus
ENSORLG00000010761	slirp	78	55.882	ENSSMAG00000012930	slirp	100	55.882	Scophthalmus_maximus
ENSORLG00000010761	slirp	80	79.612	ENSSDUG00000021883	slirp	68	79.612	Seriola_dumerili
ENSORLG00000010761	slirp	80	79.612	ENSSLDG00000023136	slirp	94	79.612	Seriola_lalandi_dorsalis
ENSORLG00000010761	slirp	64	62.353	ENSSPUG00000009346	SLIRP	87	62.353	Sphenodon_punctatus
ENSORLG00000010761	slirp	78	76.000	ENSSPAG00000013477	slirp	100	76.000	Stegastes_partitus
ENSORLG00000010761	slirp	69	53.933	ENSSSCG00000028167	SLIRP	80	53.933	Sus_scrofa
ENSORLG00000010761	slirp	60	57.692	ENSTGUG00000012337	SLIRP	87	51.087	Taeniopygia_guttata
ENSORLG00000010761	slirp	76	72.727	ENSTRUG00000020127	slirp	98	72.727	Takifugu_rubripes
ENSORLG00000010761	slirp	68	56.044	ENSUAMG00000022445	SLIRP	81	56.044	Ursus_americanus
ENSORLG00000010761	slirp	69	53.933	ENSUMAG00000007166	SLIRP	80	53.933	Ursus_maritimus
ENSORLG00000010761	slirp	68	52.273	ENSVPAG00000001781	SLIRP	81	52.273	Vicugna_pacos
ENSORLG00000010761	slirp	68	53.846	ENSVVUG00000004436	SLIRP	81	53.846	Vulpes_vulpes
ENSORLG00000010761	slirp	64	69.880	ENSXETG00000030343	SLIRP	93	69.880	Xenopus_tropicalis
ENSORLG00000010761	slirp	78	77.000	ENSXCOG00000009422	slirp	100	77.000	Xiphophorus_couchianus
ENSORLG00000010761	slirp	78	77.000	ENSXMAG00000015655	slirp	100	77.000	Xiphophorus_maculatus