EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000010787 (Gene tree)
Gene ID: 101161660
Gene Symbol: pus1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 2054 bases
Position: chr12:16272521-16274574
Accession: 101161660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013531	PseudoU_synth_1	PF01416.20	8.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013532	-	1492	XM_004074847	ENSORLP00000013531	416 (aa)	XP_004074895	H2M509

Gene Model

Click here to download ENSORLG00000010787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010787	pus1	84	69.714	ENSG00000177192	PUS1	85	72.340	Homo_sapiens
ENSORLG00000010787	pus1	100	81.280	ENSAPOG00000007254	pus1	100	81.280	Acanthochromis_polyacanthus
ENSORLG00000010787	pus1	88	66.667	ENSAMEG00000013715	PUS1	87	66.667	Ailuropoda_melanoleuca
ENSORLG00000010787	pus1	97	79.506	ENSACIG00000009169	pus1	97	79.506	Amphilophus_citrinellus
ENSORLG00000010787	pus1	100	81.043	ENSAOCG00000022207	pus1	100	81.043	Amphiprion_ocellaris
ENSORLG00000010787	pus1	100	80.806	ENSAPEG00000006039	pus1	100	83.673	Amphiprion_percula
ENSORLG00000010787	pus1	93	82.821	ENSATEG00000020688	pus1	99	82.821	Anabas_testudineus
ENSORLG00000010787	pus1	81	71.176	ENSACAG00000007367	PUS1	91	71.176	Anolis_carolinensis
ENSORLG00000010787	pus1	78	69.444	ENSANAG00000036192	PUS1	99	69.444	Aotus_nancymaae
ENSORLG00000010787	pus1	100	78.910	ENSACLG00000020868	pus1	99	81.282	Astatotilapia_calliptera
ENSORLG00000010787	pus1	99	68.193	ENSAMXG00000008710	pus1	94	68.193	Astyanax_mexicanus
ENSORLG00000010787	pus1	83	69.653	ENSBTAG00000012990	PUS1	86	69.653	Bos_taurus
ENSORLG00000010787	pus1	78	39.826	WBGene00004248	pus-1	81	39.826	Caenorhabditis_elegans
ENSORLG00000010787	pus1	61	70.079	ENSCJAG00000003720	PUS1	70	70.155	Callithrix_jacchus
ENSORLG00000010787	pus1	85	68.362	ENSCAFG00000006429	PUS1	83	71.471	Canis_familiaris
ENSORLG00000010787	pus1	80	71.471	ENSCAFG00020010737	PUS1	77	71.471	Canis_lupus_dingo
ENSORLG00000010787	pus1	83	69.942	ENSCHIG00000000487	PUS1	86	69.942	Capra_hircus
ENSORLG00000010787	pus1	84	70.000	ENSTSYG00000032605	PUS1	94	70.571	Carlito_syrichta
ENSORLG00000010787	pus1	72	72.575	ENSCAPG00000006421	PUS1	94	72.607	Cavia_aperea
ENSORLG00000010787	pus1	82	69.883	ENSCPOG00000001027	PUS1	92	63.868	Cavia_porcellus
ENSORLG00000010787	pus1	78	71.692	ENSCCAG00000015879	PUS1	90	68.712	Cebus_capucinus
ENSORLG00000010787	pus1	81	70.920	ENSCATG00000032870	PUS1	83	72.131	Cercocebus_atys
ENSORLG00000010787	pus1	79	71.341	ENSCLAG00000011689	PUS1	84	67.416	Chinchilla_lanigera
ENSORLG00000010787	pus1	81	71.217	ENSCSAG00000001879	PUS1	79	71.217	Chlorocebus_sabaeus
ENSORLG00000010787	pus1	76	71.111	ENSCPBG00000024715	PUS1	89	71.111	Chrysemys_picta_bellii
ENSORLG00000010787	pus1	82	44.315	ENSCING00000009426	-	91	44.315	Ciona_intestinalis
ENSORLG00000010787	pus1	78	43.519	ENSCSAVG00000003751	-	67	43.519	Ciona_savignyi
ENSORLG00000010787	pus1	84	61.429	ENSCANG00000035561	PUS1	89	62.918	Colobus_angolensis_palliatus
ENSORLG00000010787	pus1	81	72.271	ENSCGRG00001019592	Pus1	80	72.271	Cricetulus_griseus_chok1gshd
ENSORLG00000010787	pus1	81	72.271	ENSCGRG00000004048	Pus1	86	72.271	Cricetulus_griseus_crigri
ENSORLG00000010787	pus1	100	75.829	ENSCSEG00000003629	pus1	100	75.829	Cynoglossus_semilaevis
ENSORLG00000010787	pus1	100	81.429	ENSCVAG00000001265	pus1	100	81.429	Cyprinodon_variegatus
ENSORLG00000010787	pus1	92	69.713	ENSDARG00000045562	pus1	96	76.667	Danio_rerio
ENSORLG00000010787	pus1	78	72.086	ENSDNOG00000045576	PUS1	94	71.569	Dasypus_novemcinctus
ENSORLG00000010787	pus1	78	69.939	ENSDORG00000011455	Pus1	99	69.939	Dipodomys_ordii
ENSORLG00000010787	pus1	76	48.287	FBgn0038811	PUS1	77	48.287	Drosophila_melanogaster
ENSORLG00000010787	pus1	81	70.448	ENSETEG00000019160	PUS1	83	70.206	Echinops_telfairi
ENSORLG00000010787	pus1	83	43.597	ENSEBUG00000000368	-	69	42.895	Eptatretus_burgeri
ENSORLG00000010787	pus1	92	65.013	ENSEASG00005016535	PUS1	86	65.013	Equus_asinus_asinus
ENSORLG00000010787	pus1	87	67.403	ENSECAG00000006965	PUS1	89	67.403	Equus_caballus
ENSORLG00000010787	pus1	50	30.252	ENSECAG00000006248	PUSL1	78	30.252	Equus_caballus
ENSORLG00000010787	pus1	96	70.588	ENSELUG00000010424	pus1	96	74.339	Esox_lucius
ENSORLG00000010787	pus1	79	72.121	ENSFCAG00000010780	PUS1	84	66.758	Felis_catus
ENSORLG00000010787	pus1	83	71.143	ENSFALG00000008273	PUS1	82	71.143	Ficedula_albicollis
ENSORLG00000010787	pus1	88	67.391	ENSFDAG00000012518	PUS1	88	67.391	Fukomys_damarensis
ENSORLG00000010787	pus1	100	80.238	ENSFHEG00000010504	pus1	100	80.238	Fundulus_heteroclitus
ENSORLG00000010787	pus1	94	72.265	ENSGMOG00000008143	pus1	99	72.265	Gadus_morhua
ENSORLG00000010787	pus1	93	67.268	ENSGALG00000002354	PUS1	91	67.268	Gallus_gallus
ENSORLG00000010787	pus1	100	80.714	ENSGAFG00000006578	pus1	100	80.714	Gambusia_affinis
ENSORLG00000010787	pus1	100	76.777	ENSGACG00000017566	pus1	100	79.847	Gasterosteus_aculeatus
ENSORLG00000010787	pus1	76	70.159	ENSGAGG00000016730	-	91	69.716	Gopherus_agassizii
ENSORLG00000010787	pus1	84	70.000	ENSGGOG00000009178	PUS1	87	70.245	Gorilla_gorilla
ENSORLG00000010787	pus1	100	79.384	ENSHBUG00000001316	pus1	99	81.795	Haplochromis_burtoni
ENSORLG00000010787	pus1	84	66.857	ENSHGLG00000016086	PUS1	89	66.857	Heterocephalus_glaber_female
ENSORLG00000010787	pus1	84	66.571	ENSHGLG00100019362	PUS1	89	66.571	Heterocephalus_glaber_male
ENSORLG00000010787	pus1	100	74.524	ENSHCOG00000014288	pus1	96	74.524	Hippocampus_comes
ENSORLG00000010787	pus1	100	68.605	ENSIPUG00000010387	pus1	100	68.605	Ictalurus_punctatus
ENSORLG00000010787	pus1	83	70.520	ENSSTOG00000011245	PUS1	81	70.520	Ictidomys_tridecemlineatus
ENSORLG00000010787	pus1	81	71.893	ENSJJAG00000000088	Pus1	80	71.893	Jaculus_jaculus
ENSORLG00000010787	pus1	100	74.822	ENSKMAG00000012702	pus1	100	74.822	Kryptolebias_marmoratus
ENSORLG00000010787	pus1	96	75.682	ENSLBEG00000002845	pus1	98	75.682	Labrus_bergylta
ENSORLG00000010787	pus1	86	68.802	ENSLACG00000018598	PUS1	94	66.313	Latimeria_chalumnae
ENSORLG00000010787	pus1	77	57.453	ENSLACG00000016044	-	97	57.453	Latimeria_chalumnae
ENSORLG00000010787	pus1	90	68.912	ENSLOCG00000006127	pus1	96	68.912	Lepisosteus_oculatus
ENSORLG00000010787	pus1	85	67.989	ENSLAFG00000028731	PUS1	95	67.989	Loxodonta_africana
ENSORLG00000010787	pus1	83	69.364	ENSMFAG00000041194	PUS1	83	72.459	Macaca_fascicularis
ENSORLG00000010787	pus1	81	71.217	ENSMMUG00000031463	PUS1	87	72.459	Macaca_mulatta
ENSORLG00000010787	pus1	81	71.217	ENSMNEG00000002814	PUS1	83	72.459	Macaca_nemestrina
ENSORLG00000010787	pus1	73	72.607	ENSMLEG00000043560	PUS1	93	72.607	Mandrillus_leucophaeus
ENSORLG00000010787	pus1	100	79.621	ENSMAMG00000007371	pus1	100	79.621	Mastacembelus_armatus
ENSORLG00000010787	pus1	100	78.910	ENSMZEG00005017746	pus1	100	78.910	Maylandia_zebra
ENSORLG00000010787	pus1	78	72.755	ENSMGAG00000001958	PUS1	98	72.755	Meleagris_gallopavo
ENSORLG00000010787	pus1	60	31.179	ENSMGAG00000000851	PUS3	63	31.179	Meleagris_gallopavo
ENSORLG00000010787	pus1	81	72.566	ENSMAUG00000001482	Pus1	80	72.566	Mesocricetus_auratus
ENSORLG00000010787	pus1	83	70.349	ENSMICG00000030980	PUS1	90	67.847	Microcebus_murinus
ENSORLG00000010787	pus1	81	72.271	ENSMOCG00000022311	Pus1	80	72.271	Microtus_ochrogaster
ENSORLG00000010787	pus1	91	79.045	ENSMMOG00000021022	pus1	97	79.045	Mola_mola
ENSORLG00000010787	pus1	82	67.638	ENSMODG00000015551	PUS1	82	65.574	Monodelphis_domestica
ENSORLG00000010787	pus1	99	77.197	ENSMALG00000013202	pus1	99	77.197	Monopterus_albus
ENSORLG00000010787	pus1	88	68.022	MGP_CAROLIEiJ_G0027551	Pus1	88	71.098	Mus_caroli
ENSORLG00000010787	pus1	85	69.972	ENSMUSG00000029507	Pus1	88	71.098	Mus_musculus
ENSORLG00000010787	pus1	83	71.098	MGP_PahariEiJ_G0024133	Pus1	88	71.098	Mus_pahari
ENSORLG00000010787	pus1	85	69.972	MGP_SPRETEiJ_G0028549	Pus1	88	71.098	Mus_spretus
ENSORLG00000010787	pus1	79	72.644	ENSMPUG00000002314	PUS1	83	72.644	Mustela_putorius_furo
ENSORLG00000010787	pus1	87	66.389	ENSMLUG00000015790	PUS1	98	66.389	Myotis_lucifugus
ENSORLG00000010787	pus1	79	74.164	ENSNGAG00000012976	Pus1	78	74.164	Nannospalax_galili
ENSORLG00000010787	pus1	93	81.538	ENSNBRG00000020502	pus1	99	82.133	Neolamprologus_brichardi
ENSORLG00000010787	pus1	84	67.714	ENSNLEG00000008505	PUS1	99	69.841	Nomascus_leucogenys
ENSORLG00000010787	pus1	84	61.891	ENSMEUG00000002825	PUS1	93	61.891	Notamacropus_eugenii
ENSORLG00000010787	pus1	83	60.807	ENSOPRG00000002701	-	91	60.807	Ochotona_princeps
ENSORLG00000010787	pus1	83	70.231	ENSODEG00000008248	PUS1	91	70.231	Octodon_degus
ENSORLG00000010787	pus1	93	80.506	ENSONIG00000003803	pus1	99	80.506	Oreochromis_niloticus
ENSORLG00000010787	pus1	81	70.414	ENSOANG00000010619	PUS1	77	70.414	Ornithorhynchus_anatinus
ENSORLG00000010787	pus1	87	67.036	ENSOCUG00000007310	PUS1	79	66.849	Oryctolagus_cuniculus
ENSORLG00000010787	pus1	100	98.798	ENSORLG00020011483	pus1	100	98.798	Oryzias_latipes_hni
ENSORLG00000010787	pus1	100	98.558	ENSORLG00015023012	pus1	100	98.558	Oryzias_latipes_hsok
ENSORLG00000010787	pus1	98	90.754	ENSOMEG00000022655	pus1	96	90.754	Oryzias_melastigma
ENSORLG00000010787	pus1	88	67.030	ENSOGAG00000008720	PUS1	95	67.575	Otolemur_garnettii
ENSORLG00000010787	pus1	83	69.653	ENSOARG00000013316	PUS1	79	69.653	Ovis_aries
ENSORLG00000010787	pus1	84	70.000	ENSPPAG00000040971	PUS1	87	70.245	Pan_paniscus
ENSORLG00000010787	pus1	79	72.121	ENSPPRG00000015456	PUS1	84	72.121	Panthera_pardus
ENSORLG00000010787	pus1	78	72.086	ENSPTIG00000004201	PUS1	86	72.121	Panthera_tigris_altaica
ENSORLG00000010787	pus1	84	69.714	ENSPTRG00000005643	PUS1	87	69.939	Pan_troglodytes
ENSORLG00000010787	pus1	81	71.131	ENSPANG00000000376	PUS1	83	72.368	Papio_anubis
ENSORLG00000010787	pus1	86	68.056	ENSPKIG00000019369	pus1	87	64.615	Paramormyrops_kingsleyae
ENSORLG00000010787	pus1	60	30.035	ENSPSIG00000013961	PUS3	51	30.035	Pelodiscus_sinensis
ENSORLG00000010787	pus1	91	65.789	ENSPSIG00000016432	PUS1	94	63.210	Pelodiscus_sinensis
ENSORLG00000010787	pus1	91	75.526	ENSPMGG00000004522	pus1	97	76.064	Periophthalmus_magnuspinnatus
ENSORLG00000010787	pus1	81	72.566	ENSPEMG00000013448	Pus1	80	72.566	Peromyscus_maniculatus_bairdii
ENSORLG00000010787	pus1	79	59.215	ENSPMAG00000004636	pus1	99	59.215	Petromyzon_marinus
ENSORLG00000010787	pus1	72	60.465	ENSPCIG00000022609	-	73	59.609	Phascolarctos_cinereus
ENSORLG00000010787	pus1	100	79.762	ENSPFOG00000019669	pus1	100	79.762	Poecilia_formosa
ENSORLG00000010787	pus1	100	79.524	ENSPLAG00000002692	-	100	79.524	Poecilia_latipinna
ENSORLG00000010787	pus1	100	79.524	ENSPLAG00000007185	pus1	100	79.524	Poecilia_latipinna
ENSORLG00000010787	pus1	100	79.524	ENSPMEG00000011115	PUS1	100	79.524	Poecilia_mexicana
ENSORLG00000010787	pus1	98	79.805	ENSPMEG00000006038	pus1	98	81.818	Poecilia_mexicana
ENSORLG00000010787	pus1	95	81.726	ENSPREG00000007231	pus1	99	83.287	Poecilia_reticulata
ENSORLG00000010787	pus1	84	69.143	ENSPPYG00000005132	PUS1	82	69.143	Pongo_abelii
ENSORLG00000010787	pus1	64	65.789	ENSPCAG00000009110	-	65	65.789	Procavia_capensis
ENSORLG00000010787	pus1	83	61.628	ENSPCOG00000015595	PUS1	90	60.490	Propithecus_coquereli
ENSORLG00000010787	pus1	100	78.910	ENSPNYG00000013571	pus1	100	78.910	Pundamilia_nyererei
ENSORLG00000010787	pus1	91	73.475	ENSPNAG00000003938	pus1	88	73.475	Pygocentrus_nattereri
ENSORLG00000010787	pus1	85	69.688	ENSRNOG00000037500	Pus1	83	69.688	Rattus_norvegicus
ENSORLG00000010787	pus1	84	69.714	ENSRBIG00000043177	PUS1	90	69.939	Rhinopithecus_bieti
ENSORLG00000010787	pus1	84	69.714	ENSRROG00000039744	PUS1	88	69.205	Rhinopithecus_roxellana
ENSORLG00000010787	pus1	78	45.185	YPL212C	-	69	38.220	Saccharomyces_cerevisiae
ENSORLG00000010787	pus1	84	69.143	ENSSBOG00000023593	PUS1	92	69.040	Saimiri_boliviensis_boliviensis
ENSORLG00000010787	pus1	88	66.213	ENSSHAG00000013193	PUS1	89	66.213	Sarcophilus_harrisii
ENSORLG00000010787	pus1	86	72.299	ENSSFOG00015003463	pus1	84	71.237	Scleropages_formosus
ENSORLG00000010787	pus1	100	77.014	ENSSMAG00000019075	pus1	100	77.014	Scophthalmus_maximus
ENSORLG00000010787	pus1	100	80.332	ENSSDUG00000007102	pus1	100	80.332	Seriola_dumerili
ENSORLG00000010787	pus1	100	80.095	ENSSLDG00000022850	pus1	100	80.095	Seriola_lalandi_dorsalis
ENSORLG00000010787	pus1	73	61.716	ENSSARG00000008367	PUS1	98	61.716	Sorex_araneus
ENSORLG00000010787	pus1	85	68.839	ENSSPUG00000010009	PUS1	87	68.839	Sphenodon_punctatus
ENSORLG00000010787	pus1	94	83.418	ENSSPAG00000006272	pus1	100	83.418	Stegastes_partitus
ENSORLG00000010787	pus1	92	65.633	ENSSSCG00000009741	PUS1	93	65.633	Sus_scrofa
ENSORLG00000010787	pus1	79	73.939	ENSTGUG00000008068	PUS1	99	73.939	Taeniopygia_guttata
ENSORLG00000010787	pus1	88	78.689	ENSTRUG00000002198	pus1	91	80.563	Takifugu_rubripes
ENSORLG00000010787	pus1	90	75.532	ENSTNIG00000003942	pus1	94	76.533	Tetraodon_nigroviridis
ENSORLG00000010787	pus1	95	62.222	ENSTTRG00000000632	PUS1	95	62.222	Tursiops_truncatus
ENSORLG00000010787	pus1	85	68.347	ENSUAMG00000017197	PUS1	90	68.347	Ursus_americanus
ENSORLG00000010787	pus1	94	63.427	ENSUMAG00000002831	PUS1	94	72.611	Ursus_maritimus
ENSORLG00000010787	pus1	79	71.818	ENSVVUG00000004199	PUS1	75	71.818	Vulpes_vulpes
ENSORLG00000010787	pus1	83	67.919	ENSXETG00000002030	pus1	86	67.919	Xenopus_tropicalis
ENSORLG00000010787	pus1	77	50.000	ENSXETG00000033640	-	99	50.000	Xenopus_tropicalis
ENSORLG00000010787	pus1	95	84.091	ENSXCOG00000004722	pus1	98	84.921	Xiphophorus_couchianus
ENSORLG00000010787	pus1	100	81.429	ENSXMAG00000000988	pus1	100	81.429	Xiphophorus_maculatus