EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000010915 (Gene tree)
Gene ID: 101167355
Gene Symbol: urb2
Alias: -
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 16438 bases
Position: chr3:24525008-24541445
Accession: 101167355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013689	Urb2	PF10441.9	1.1e-17	1	1
ENSORLP00000026300	Urb2	PF10441.9	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013690	-	8937	XM_011492328	ENSORLP00000013689	1617 (aa)	XP_011490630	H2M5G0
ENSORLT00000029596	-	8980	-	ENSORLP00000026300	1580 (aa)	-	-

Gene Model

Click here to download ENSORLG00000010915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010915	urb2	99	34.445	ENSG00000135763	URB2	100	56.322	Homo_sapiens
ENSORLG00000010915	urb2	93	61.868	ENSAPOG00000000608	urb2	100	61.803	Acanthochromis_polyacanthus
ENSORLG00000010915	urb2	100	35.280	ENSAMEG00000009206	URB2	100	35.319	Ailuropoda_melanoleuca
ENSORLG00000010915	urb2	100	63.335	ENSAOCG00000019961	urb2	100	63.572	Amphiprion_ocellaris
ENSORLG00000010915	urb2	100	63.335	ENSAPEG00000005263	urb2	100	63.572	Amphiprion_percula
ENSORLG00000010915	urb2	100	61.252	ENSATEG00000020930	urb2	100	61.288	Anabas_testudineus
ENSORLG00000010915	urb2	99	35.723	ENSAPLG00000002998	URB2	99	35.661	Anas_platyrhynchos
ENSORLG00000010915	urb2	99	36.757	ENSACAG00000001285	URB2	99	36.577	Anolis_carolinensis
ENSORLG00000010915	urb2	99	34.957	ENSANAG00000033963	URB2	99	34.957	Aotus_nancymaae
ENSORLG00000010915	urb2	93	61.187	ENSACLG00000009254	urb2	100	61.057	Astatotilapia_calliptera
ENSORLG00000010915	urb2	99	40.158	ENSAMXG00000003474	urb2	99	39.915	Astyanax_mexicanus
ENSORLG00000010915	urb2	100	35.097	ENSBTAG00000010180	URB2	100	35.079	Bos_taurus
ENSORLG00000010915	urb2	95	57.343	ENSCJAG00000010968	URB2	99	57.343	Callithrix_jacchus
ENSORLG00000010915	urb2	99	34.164	ENSCAFG00000012118	URB2	99	34.143	Canis_familiaris
ENSORLG00000010915	urb2	95	32.788	ENSCAFG00020027217	URB2	98	32.897	Canis_lupus_dingo
ENSORLG00000010915	urb2	100	35.191	ENSCHIG00000014513	URB2	100	35.191	Capra_hircus
ENSORLG00000010915	urb2	100	35.184	ENSTSYG00000006924	URB2	100	35.344	Carlito_syrichta
ENSORLG00000010915	urb2	57	42.857	ENSCPOG00000020777	-	99	42.857	Cavia_porcellus
ENSORLG00000010915	urb2	99	35.262	ENSCCAG00000023932	URB2	99	35.262	Cebus_capucinus
ENSORLG00000010915	urb2	99	34.653	ENSCATG00000043366	URB2	99	34.571	Cercocebus_atys
ENSORLG00000010915	urb2	99	35.810	ENSCLAG00000006268	URB2	99	36.061	Chinchilla_lanigera
ENSORLG00000010915	urb2	99	34.594	ENSCSAG00000010599	URB2	99	34.512	Chlorocebus_sabaeus
ENSORLG00000010915	urb2	71	41.987	ENSCHOG00000010163	URB2	70	41.987	Choloepus_hoffmanni
ENSORLG00000010915	urb2	99	37.485	ENSCPBG00000006191	URB2	99	37.604	Chrysemys_picta_bellii
ENSORLG00000010915	urb2	99	34.491	ENSCANG00000023711	URB2	99	34.409	Colobus_angolensis_palliatus
ENSORLG00000010915	urb2	99	34.754	ENSCGRG00001009591	Urb2	99	34.754	Cricetulus_griseus_chok1gshd
ENSORLG00000010915	urb2	99	34.754	ENSCGRG00000011259	Urb2	99	34.754	Cricetulus_griseus_crigri
ENSORLG00000010915	urb2	100	52.825	ENSCSEG00000000299	urb2	100	52.764	Cynoglossus_semilaevis
ENSORLG00000010915	urb2	100	61.318	ENSCVAG00000011011	urb2	100	61.684	Cyprinodon_variegatus
ENSORLG00000010915	urb2	100	43.197	ENSDARG00000003217	urb2	100	67.308	Danio_rerio
ENSORLG00000010915	urb2	99	33.168	ENSDNOG00000043064	URB2	100	33.086	Dasypus_novemcinctus
ENSORLG00000010915	urb2	99	34.017	ENSDORG00000014975	Urb2	99	34.017	Dipodomys_ordii
ENSORLG00000010915	urb2	95	38.028	ENSETEG00000002869	URB2	95	38.028	Echinops_telfairi
ENSORLG00000010915	urb2	100	35.693	ENSEASG00005012060	URB2	100	35.874	Equus_asinus_asinus
ENSORLG00000010915	urb2	93	57.931	ENSECAG00000012338	URB2	100	57.931	Equus_caballus
ENSORLG00000010915	urb2	92	55.245	ENSEEUG00000002669	URB2	92	55.245	Erinaceus_europaeus
ENSORLG00000010915	urb2	100	47.789	ENSELUG00000014647	urb2	100	47.910	Esox_lucius
ENSORLG00000010915	urb2	99	35.018	ENSFCAG00000007662	URB2	99	35.212	Felis_catus
ENSORLG00000010915	urb2	99	37.410	ENSFALG00000003385	URB2	99	37.350	Ficedula_albicollis
ENSORLG00000010915	urb2	99	35.932	ENSFDAG00000021079	URB2	99	35.966	Fukomys_damarensis
ENSORLG00000010915	urb2	100	60.098	ENSFHEG00000010357	urb2	100	60.159	Fundulus_heteroclitus
ENSORLG00000010915	urb2	99	49.363	ENSGMOG00000012459	urb2	100	49.606	Gadus_morhua
ENSORLG00000010915	urb2	99	37.642	ENSGALG00000011101	URB2	99	37.403	Gallus_gallus
ENSORLG00000010915	urb2	100	58.763	ENSGACG00000016179	urb2	100	58.520	Gasterosteus_aculeatus
ENSORLG00000010915	urb2	99	37.993	ENSGAGG00000021879	URB2	99	38.112	Gopherus_agassizii
ENSORLG00000010915	urb2	99	34.529	ENSGGOG00000025643	URB2	99	34.569	Gorilla_gorilla
ENSORLG00000010915	urb2	100	61.942	ENSHBUG00000018469	urb2	100	61.823	Haplochromis_burtoni
ENSORLG00000010915	urb2	99	34.178	ENSHGLG00000016561	URB2	99	34.670	Heterocephalus_glaber_female
ENSORLG00000010915	urb2	99	34.882	ENSHGLG00100001838	URB2	99	34.762	Heterocephalus_glaber_male
ENSORLG00000010915	urb2	100	41.291	ENSIPUG00000020315	urb2	100	40.788	Ictalurus_punctatus
ENSORLG00000010915	urb2	99	35.628	ENSSTOG00000025323	URB2	99	35.628	Ictidomys_tridecemlineatus
ENSORLG00000010915	urb2	99	35.130	ENSJJAG00000011998	Urb2	99	35.130	Jaculus_jaculus
ENSORLG00000010915	urb2	100	63.253	ENSKMAG00000020129	urb2	100	63.418	Kryptolebias_marmoratus
ENSORLG00000010915	urb2	99	37.921	ENSLACG00000002038	URB2	99	37.929	Latimeria_chalumnae
ENSORLG00000010915	urb2	99	41.787	ENSLOCG00000015462	urb2	99	41.898	Lepisosteus_oculatus
ENSORLG00000010915	urb2	99	35.036	ENSLAFG00000012484	URB2	100	34.915	Loxodonta_africana
ENSORLG00000010915	urb2	99	34.613	ENSMFAG00000039905	URB2	99	34.531	Macaca_fascicularis
ENSORLG00000010915	urb2	99	34.653	ENSMMUG00000009509	URB2	99	34.571	Macaca_mulatta
ENSORLG00000010915	urb2	99	34.592	ENSMNEG00000038762	URB2	99	34.510	Macaca_nemestrina
ENSORLG00000010915	urb2	99	34.714	ENSMLEG00000043252	URB2	99	34.632	Mandrillus_leucophaeus
ENSORLG00000010915	urb2	100	59.008	ENSMAMG00000020365	urb2	100	59.327	Mastacembelus_armatus
ENSORLG00000010915	urb2	100	61.882	ENSMZEG00005011027	urb2	100	61.763	Maylandia_zebra
ENSORLG00000010915	urb2	95	35.802	ENSMGAG00000012073	URB2	98	35.580	Meleagris_gallopavo
ENSORLG00000010915	urb2	95	57.343	ENSMAUG00000017980	Urb2	99	57.343	Mesocricetus_auratus
ENSORLG00000010915	urb2	100	34.775	ENSMICG00000033302	URB2	100	34.936	Microcebus_murinus
ENSORLG00000010915	urb2	99	34.709	ENSMOCG00000020369	Urb2	99	34.709	Microtus_ochrogaster
ENSORLG00000010915	urb2	100	61.589	ENSMALG00000006529	urb2	100	61.529	Monopterus_albus
ENSORLG00000010915	urb2	99	34.683	ENSMUSG00000031976	Urb2	99	34.895	Mus_musculus
ENSORLG00000010915	urb2	99	35.462	ENSMPUG00000012438	URB2	99	35.423	Mustela_putorius_furo
ENSORLG00000010915	urb2	99	35.109	ENSNGAG00000016524	Urb2	99	35.507	Nannospalax_galili
ENSORLG00000010915	urb2	99	34.730	ENSNLEG00000014450	URB2	99	34.648	Nomascus_leucogenys
ENSORLG00000010915	urb2	92	45.045	ENSMEUG00000016434	URB2	92	45.045	Notamacropus_eugenii
ENSORLG00000010915	urb2	87	78.571	ENSOPRG00000009906	URB2	86	78.571	Ochotona_princeps
ENSORLG00000010915	urb2	99	35.762	ENSODEG00000005593	URB2	99	35.645	Octodon_degus
ENSORLG00000010915	urb2	100	60.475	ENSONIG00000017078	urb2	100	60.597	Oreochromis_niloticus
ENSORLG00000010915	urb2	99	34.331	ENSOANG00000013732	URB2	99	34.698	Ornithorhynchus_anatinus
ENSORLG00000010915	urb2	100	35.883	ENSOCUG00000010700	URB2	100	35.922	Oryctolagus_cuniculus
ENSORLG00000010915	urb2	100	97.959	ENSORLG00020003361	urb2	100	97.959	Oryzias_latipes_hni
ENSORLG00000010915	urb2	100	97.341	ENSORLG00015001534	urb2	100	97.341	Oryzias_latipes_hsok
ENSORLG00000010915	urb2	100	84.207	ENSOMEG00000010076	urb2	100	84.454	Oryzias_melastigma
ENSORLG00000010915	urb2	100	34.927	ENSOGAG00000003021	URB2	100	34.785	Otolemur_garnettii
ENSORLG00000010915	urb2	100	34.951	ENSOARG00000003102	URB2	100	35.073	Ovis_aries
ENSORLG00000010915	urb2	99	34.690	ENSPPAG00000040629	URB2	99	34.730	Pan_paniscus
ENSORLG00000010915	urb2	99	35.079	ENSPPRG00000012767	URB2	99	35.180	Panthera_pardus
ENSORLG00000010915	urb2	95	75.000	ENSPTIG00000012577	URB2	99	75.000	Panthera_tigris_altaica
ENSORLG00000010915	urb2	99	34.690	ENSPTRG00000002092	URB2	99	34.730	Pan_troglodytes
ENSORLG00000010915	urb2	99	33.557	ENSPANG00000002245	URB2	99	33.475	Papio_anubis
ENSORLG00000010915	urb2	99	42.754	ENSPKIG00000005787	urb2	99	42.728	Paramormyrops_kingsleyae
ENSORLG00000010915	urb2	99	37.597	ENSPSIG00000002690	URB2	99	37.493	Pelodiscus_sinensis
ENSORLG00000010915	urb2	96	33.396	ENSPEMG00000019551	Urb2	100	33.438	Peromyscus_maniculatus_bairdii
ENSORLG00000010915	urb2	99	35.701	ENSPCIG00000030071	URB2	99	35.641	Phascolarctos_cinereus
ENSORLG00000010915	urb2	100	60.134	ENSPFOG00000014330	urb2	100	60.244	Poecilia_formosa
ENSORLG00000010915	urb2	100	59.707	ENSPLAG00000014654	urb2	100	59.793	Poecilia_latipinna
ENSORLG00000010915	urb2	100	60.317	ENSPMEG00000012356	urb2	100	60.427	Poecilia_mexicana
ENSORLG00000010915	urb2	100	60.317	ENSPREG00000010268	urb2	100	60.403	Poecilia_reticulata
ENSORLG00000010915	urb2	100	34.466	ENSPPYG00000000123	URB2	100	34.445	Pongo_abelii
ENSORLG00000010915	urb2	100	35.237	ENSPCOG00000023537	URB2	100	35.319	Propithecus_coquereli
ENSORLG00000010915	urb2	99	33.475	ENSPVAG00000002108	URB2	99	33.475	Pteropus_vampyrus
ENSORLG00000010915	urb2	93	60.836	ENSPNYG00000016840	urb2	100	60.966	Pundamilia_nyererei
ENSORLG00000010915	urb2	99	42.242	ENSPNAG00000013684	urb2	99	42.242	Pygocentrus_nattereri
ENSORLG00000010915	urb2	99	34.334	ENSRNOG00000026853	Urb2	97	34.493	Rattus_norvegicus
ENSORLG00000010915	urb2	99	34.878	ENSRBIG00000037937	URB2	99	34.796	Rhinopithecus_bieti
ENSORLG00000010915	urb2	99	35.000	ENSRROG00000039854	URB2	99	34.918	Rhinopithecus_roxellana
ENSORLG00000010915	urb2	99	35.055	ENSSBOG00000023055	URB2	99	35.055	Saimiri_boliviensis_boliviensis
ENSORLG00000010915	urb2	99	34.851	ENSSHAG00000014735	URB2	99	34.791	Sarcophilus_harrisii
ENSORLG00000010915	urb2	99	44.424	ENSSFOG00015015432	urb2	98	43.769	Scleropages_formosus
ENSORLG00000010915	urb2	93	60.039	ENSSMAG00000004984	urb2	100	59.845	Scophthalmus_maximus
ENSORLG00000010915	urb2	100	63.189	ENSSDUG00000000902	urb2	100	63.306	Seriola_dumerili
ENSORLG00000010915	urb2	99	37.321	ENSSPUG00000018549	URB2	99	37.545	Sphenodon_punctatus
ENSORLG00000010915	urb2	100	63.685	ENSSPAG00000013632	urb2	100	63.626	Stegastes_partitus
ENSORLG00000010915	urb2	100	35.337	ENSSSCG00000010186	URB2	100	35.337	Sus_scrofa
ENSORLG00000010915	urb2	99	36.679	ENSTGUG00000009990	URB2	99	36.618	Taeniopygia_guttata
ENSORLG00000010915	urb2	100	53.722	ENSTRUG00000008173	urb2	100	53.603	Takifugu_rubripes
ENSORLG00000010915	urb2	95	55.233	ENSTNIG00000017689	urb2	98	55.233	Tetraodon_nigroviridis
ENSORLG00000010915	urb2	95	78.571	ENSTTRG00000014864	URB2	95	78.571	Tursiops_truncatus
ENSORLG00000010915	urb2	100	35.523	ENSUAMG00000015022	URB2	100	35.562	Ursus_americanus
ENSORLG00000010915	urb2	100	35.423	ENSUMAG00000004728	URB2	100	35.462	Ursus_maritimus
ENSORLG00000010915	urb2	53	58.333	ENSVPAG00000001750	-	51	58.333	Vicugna_pacos
ENSORLG00000010915	urb2	99	34.854	ENSVVUG00000006747	URB2	99	34.833	Vulpes_vulpes
ENSORLG00000010915	urb2	99	34.798	ENSXETG00000023331	urb2	99	34.741	Xenopus_tropicalis
ENSORLG00000010915	urb2	100	59.976	ENSXMAG00000015059	urb2	100	59.915	Xiphophorus_maculatus