EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000010983 (Gene tree)
Gene ID: 101155209
Gene Symbol: sfswap
Alias: -
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 63433 bases
Position: chr12:17174352-17237784
Accession: 101155209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013776	DRY_EERY	PF09750.9	8.4e-32	1	1
ENSORLP00000013776	Surp	PF01805.20	6.7e-29	1	2
ENSORLP00000013776	Surp	PF01805.20	6.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000013777	-	4894	XM_011481916	ENSORLP00000013776	941 (aa)	XP_011480218	H2M5P4

Gene Model

Click here to download ENSORLG00000010983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000010983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000010983	sfswap	57	67.302	ENSG00000061936	SFSWAP	67	80.247	Homo_sapiens
ENSORLG00000010983	sfswap	82	95.652	ENSAPOG00000005784	sfswap	75	95.652	Acanthochromis_polyacanthus
ENSORLG00000010983	sfswap	71	56.474	ENSAMEG00000013818	SFSWAP	82	58.159	Ailuropoda_melanoleuca
ENSORLG00000010983	sfswap	77	80.110	ENSAOCG00000016469	sfswap	75	79.696	Amphiprion_ocellaris
ENSORLG00000010983	sfswap	100	76.963	ENSAPEG00000004965	sfswap	76	79.972	Amphiprion_percula
ENSORLG00000010983	sfswap	78	77.212	ENSATEG00000021053	sfswap	75	77.428	Anabas_testudineus
ENSORLG00000010983	sfswap	68	59.885	ENSANAG00000001518	SFSWAP	82	58.114	Aotus_nancymaae
ENSORLG00000010983	sfswap	77	79.448	ENSACLG00000020159	sfswap	79	79.586	Astatotilapia_calliptera
ENSORLG00000010983	sfswap	72	65.278	ENSAMXG00000008657	sfswap	72	66.433	Astyanax_mexicanus
ENSORLG00000010983	sfswap	83	58.345	ENSBTAG00000000439	SFSWAP	82	57.895	Bos_taurus
ENSORLG00000010983	sfswap	97	51.844	ENSCJAG00000003613	SFSWAP	76	58.333	Callithrix_jacchus
ENSORLG00000010983	sfswap	69	60.000	ENSCAFG00000006625	SFSWAP	80	59.825	Canis_familiaris
ENSORLG00000010983	sfswap	59	54.799	ENSCAFG00020011254	SFSWAP	66	55.315	Canis_lupus_dingo
ENSORLG00000010983	sfswap	50	67.480	ENSCHIG00000008838	SFSWAP	82	57.836	Capra_hircus
ENSORLG00000010983	sfswap	53	66.577	ENSCCAG00000037255	SFSWAP	80	59.137	Cebus_capucinus
ENSORLG00000010983	sfswap	69	55.492	ENSCATG00000031094	SFSWAP	81	58.274	Cercocebus_atys
ENSORLG00000010983	sfswap	78	60.317	ENSCHOG00000003578	SFSWAP	82	58.478	Choloepus_hoffmanni
ENSORLG00000010983	sfswap	97	52.294	ENSCPBG00000024757	SFSWAP	80	59.065	Chrysemys_picta_bellii
ENSORLG00000010983	sfswap	78	74.168	ENSCSEG00000003773	sfswap	76	74.390	Cynoglossus_semilaevis
ENSORLG00000010983	sfswap	72	67.842	ENSDARG00000005980	sfswap	73	68.980	Danio_rerio
ENSORLG00000010983	sfswap	97	49.951	ENSDNOG00000018742	SFSWAP	80	60.173	Dasypus_novemcinctus
ENSORLG00000010983	sfswap	61	57.588	ENSDORG00000010352	Sfswap	70	52.838	Dipodomys_ordii
ENSORLG00000010983	sfswap	68	100.000	ENSETEG00000016657	-	67	100.000	Echinops_telfairi
ENSORLG00000010983	sfswap	84	34.542	ENSEBUG00000016748	SFSWAP	73	38.416	Eptatretus_burgeri
ENSORLG00000010983	sfswap	86	59.803	ENSEASG00005016502	SFSWAP	82	58.889	Equus_asinus_asinus
ENSORLG00000010983	sfswap	86	59.803	ENSECAG00000007657	SFSWAP	82	58.889	Equus_caballus
ENSORLG00000010983	sfswap	84	49.194	ENSEEUG00000001713	SFSWAP	63	63.743	Erinaceus_europaeus
ENSORLG00000010983	sfswap	100	60.573	ENSELUG00000010942	sfswap	94	63.158	Esox_lucius
ENSORLG00000010983	sfswap	97	53.333	ENSFCAG00000010778	SFSWAP	70	60.174	Felis_catus
ENSORLG00000010983	sfswap	68	59.307	ENSFALG00000009577	SFSWAP	75	58.300	Ficedula_albicollis
ENSORLG00000010983	sfswap	100	75.370	ENSGAFG00000006272	sfswap	79	77.473	Gambusia_affinis
ENSORLG00000010983	sfswap	70	67.521	ENSGACG00000017647	sfswap	85	64.966	Gasterosteus_aculeatus
ENSORLG00000010983	sfswap	97	52.121	ENSGAGG00000002611	SFSWAP	80	58.924	Gopherus_agassizii
ENSORLG00000010983	sfswap	50	67.302	ENSGGOG00000014877	SFSWAP	81	58.748	Gorilla_gorilla
ENSORLG00000010983	sfswap	77	79.201	ENSHBUG00000005629	sfswap	100	74.385	Haplochromis_burtoni
ENSORLG00000010983	sfswap	100	68.592	ENSHCOG00000009475	sfswap	77	72.343	Hippocampus_comes
ENSORLG00000010983	sfswap	71	69.209	ENSIPUG00000010598	sfswap	74	68.750	Ictalurus_punctatus
ENSORLG00000010983	sfswap	77	77.717	ENSKMAG00000013168	sfswap	75	78.052	Kryptolebias_marmoratus
ENSORLG00000010983	sfswap	75	77.528	ENSLBEG00000010239	sfswap	78	77.247	Labrus_bergylta
ENSORLG00000010983	sfswap	71	56.643	ENSLACG00000018678	SFSWAP	71	56.863	Latimeria_chalumnae
ENSORLG00000010983	sfswap	69	57.528	ENSMFAG00000037352	SFSWAP	81	58.133	Macaca_fascicularis
ENSORLG00000010983	sfswap	69	58.381	ENSMMUG00000020343	SFSWAP	71	58.133	Macaca_mulatta
ENSORLG00000010983	sfswap	89	58.381	ENSMNEG00000041002	SFSWAP	81	58.133	Macaca_nemestrina
ENSORLG00000010983	sfswap	54	62.500	ENSMLEG00000035728	SFSWAP	80	56.534	Mandrillus_leucophaeus
ENSORLG00000010983	sfswap	75	78.333	ENSMAMG00000006631	sfswap	76	78.056	Mastacembelus_armatus
ENSORLG00000010983	sfswap	77	79.448	ENSMZEG00005017834	SFSWAP	75	79.586	Maylandia_zebra
ENSORLG00000010983	sfswap	53	67.486	ENSMICG00000004465	SFSWAP	80	59.475	Microcebus_murinus
ENSORLG00000010983	sfswap	77	67.024	ENSMOCG00000014390	Sfswap	70	60.029	Microtus_ochrogaster
ENSORLG00000010983	sfswap	57	61.774	ENSMODG00000015581	SFSWAP	68	53.058	Monodelphis_domestica
ENSORLG00000010983	sfswap	88	66.667	MGP_PahariEiJ_G0024360	Sfswap	67	77.778	Mus_pahari
ENSORLG00000010983	sfswap	71	59.275	ENSMPUG00000002218	SFSWAP	73	58.939	Mustela_putorius_furo
ENSORLG00000010983	sfswap	69	59.629	ENSMLUG00000011296	SFSWAP	74	59.714	Myotis_lucifugus
ENSORLG00000010983	sfswap	71	77.728	ENSNBRG00000020857	sfswap	73	78.313	Neolamprologus_brichardi
ENSORLG00000010983	sfswap	69	57.790	ENSNLEG00000008386	SFSWAP	80	59.007	Nomascus_leucogenys
ENSORLG00000010983	sfswap	70	65.014	ENSOPRG00000006983	-	75	59.756	Ochotona_princeps
ENSORLG00000010983	sfswap	88	70.924	ENSONIG00000003757	sfswap	88	72.358	Oreochromis_niloticus
ENSORLG00000010983	sfswap	100	98.621	ENSORLG00020010779	sfswap	100	98.621	Oryzias_latipes_hni
ENSORLG00000010983	sfswap	100	97.983	ENSORLG00015023093	sfswap	100	97.983	Oryzias_latipes_hsok
ENSORLG00000010983	sfswap	100	91.180	ENSOMEG00000022065	sfswap	100	91.180	Oryzias_melastigma
ENSORLG00000010983	sfswap	50	67.209	ENSOARG00000014314	SFSWAP	83	57.836	Ovis_aries
ENSORLG00000010983	sfswap	57	67.575	ENSPPAG00000036706	SFSWAP	81	58.748	Pan_paniscus
ENSORLG00000010983	sfswap	97	50.635	ENSPPRG00000017318	SFSWAP	80	58.832	Panthera_pardus
ENSORLG00000010983	sfswap	96	48.845	ENSPTIG00000004304	SFSWAP	68	65.583	Panthera_tigris_altaica
ENSORLG00000010983	sfswap	89	67.575	ENSPTRG00000005640	SFSWAP	85	58.748	Pan_troglodytes
ENSORLG00000010983	sfswap	69	55.492	ENSPANG00000019737	SFSWAP	81	58.274	Papio_anubis
ENSORLG00000010983	sfswap	74	62.978	ENSPKIG00000008327	sfswap	76	63.401	Paramormyrops_kingsleyae
ENSORLG00000010983	sfswap	86	68.278	ENSPCIG00000006062	SFSWAP	78	56.491	Phascolarctos_cinereus
ENSORLG00000010983	sfswap	100	76.638	ENSPFOG00000019657	sfswap	77	78.177	Poecilia_formosa
ENSORLG00000010983	sfswap	100	75.476	ENSPLAG00000008513	sfswap	77	78.177	Poecilia_latipinna
ENSORLG00000010983	sfswap	77	78.326	ENSPMEG00000008716	sfswap	78	78.052	Poecilia_mexicana
ENSORLG00000010983	sfswap	100	75.684	ENSPREG00000006692	sfswap	77	77.641	Poecilia_reticulata
ENSORLG00000010983	sfswap	52	57.831	ENSPCAG00000004977	-	57	60.200	Procavia_capensis
ENSORLG00000010983	sfswap	54	67.030	ENSPCOG00000023786	SFSWAP	82	57.741	Propithecus_coquereli
ENSORLG00000010983	sfswap	72	65.000	ENSPNAG00000007073	sfswap	73	66.996	Pygocentrus_nattereri
ENSORLG00000010983	sfswap	61	66.307	ENSRBIG00000036330	SFSWAP	69	57.571	Rhinopithecus_bieti
ENSORLG00000010983	sfswap	63	66.577	ENSSBOG00000026217	SFSWAP	83	57.083	Saimiri_boliviensis_boliviensis
ENSORLG00000010983	sfswap	67	67.069	ENSSFOG00015000766	sfswap	70	67.071	Scleropages_formosus
ENSORLG00000010983	sfswap	77	77.038	ENSSMAG00000018718	sfswap	76	76.463	Scophthalmus_maximus
ENSORLG00000010983	sfswap	77	78.919	ENSSDUG00000021680	sfswap	74	78.875	Seriola_dumerili
ENSORLG00000010983	sfswap	77	78.784	ENSSLDG00000010835	sfswap	74	78.738	Seriola_lalandi_dorsalis
ENSORLG00000010983	sfswap	71	67.188	ENSSARG00000000424	SFSWAP	83	59.181	Sorex_araneus
ENSORLG00000010983	sfswap	59	53.268	ENSSPUG00000010272	SFSWAP	70	54.664	Sphenodon_punctatus
ENSORLG00000010983	sfswap	76	79.306	ENSSPAG00000014310	sfswap	77	79.092	Stegastes_partitus
ENSORLG00000010983	sfswap	69	60.113	ENSSSCG00000009744	SFSWAP	73	58.252	Sus_scrofa
ENSORLG00000010983	sfswap	84	54.958	ENSTTRG00000013478	SFSWAP	63	65.940	Tursiops_truncatus
ENSORLG00000010983	sfswap	71	58.020	ENSUAMG00000016807	SFSWAP	81	59.058	Ursus_americanus
ENSORLG00000010983	sfswap	64	68.208	ENSUMAG00000002957	SFSWAP	74	67.536	Ursus_maritimus
ENSORLG00000010983	sfswap	69	60.000	ENSVVUG00000010753	SFSWAP	70	60.058	Vulpes_vulpes
ENSORLG00000010983	sfswap	83	57.022	ENSXETG00000009350	sfswap	91	58.025	Xenopus_tropicalis
ENSORLG00000010983	sfswap	77	77.854	ENSXMAG00000009020	sfswap	77	77.579	Xiphophorus_maculatus