EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000011008 (Gene tree)
Gene ID: 101171258
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 15058 bases
Position: chr10:27750133-27765190
Accession: 101171258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000013808	MIF4G_like	PF09088.11	1.1e-37	1	1
ENSORLP00000026641	MIF4G_like	PF09088.11	1.2e-37	1	1
ENSORLP00000013808	MIF4G_like_2	PF09090.11	5.5e-88	1	1
ENSORLP00000026641	MIF4G_like_2	PF09090.11	4e-87	1	1
ENSORLP00000026641	MIF4G	PF02854.19	2.3e-27	1	1
ENSORLP00000013808	MIF4G	PF02854.19	4.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029506	NCBP1-202	5885	XM_004073601	ENSORLP00000026641	799 (aa)	XP_004073649	UPI0002A489B1
ENSORLT00000013809	NCBP1-201	2175	-	ENSORLP00000013808	724 (aa)	-	H2M5S5

Gene Model

Click here to download ENSORLG00000011008's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG
ola03015	mRNA surveillance pathway	KEGG
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011008	NCBP1	99	80.827	ENSG00000136937	NCBP1	99	81.203	Homo_sapiens
ENSORLG00000011008	NCBP1	100	94.869	ENSAPOG00000008002	NCBP1	100	94.869	Acanthochromis_polyacanthus
ENSORLG00000011008	NCBP1	99	81.000	ENSAMEG00000004763	NCBP1	99	81.375	Ailuropoda_melanoleuca
ENSORLG00000011008	NCBP1	100	94.368	ENSACIG00000000274	NCBP1	100	94.368	Amphilophus_citrinellus
ENSORLG00000011008	NCBP1	100	95.119	ENSAOCG00000021148	NCBP1	100	95.119	Amphiprion_ocellaris
ENSORLG00000011008	NCBP1	100	95.119	ENSAPEG00000001701	NCBP1	100	95.119	Amphiprion_percula
ENSORLG00000011008	NCBP1	100	95.369	ENSATEG00000006929	NCBP1	100	95.369	Anabas_testudineus
ENSORLG00000011008	NCBP1	98	81.502	ENSAPLG00000016318	NCBP1	99	81.021	Anas_platyrhynchos
ENSORLG00000011008	NCBP1	99	82.000	ENSACAG00000004409	NCBP1	87	82.000	Anolis_carolinensis
ENSORLG00000011008	NCBP1	98	81.346	ENSANAG00000025744	NCBP1	99	80.796	Aotus_nancymaae
ENSORLG00000011008	NCBP1	100	94.243	ENSACLG00000014812	NCBP1	100	94.243	Astatotilapia_calliptera
ENSORLG00000011008	NCBP1	100	90.875	ENSAMXG00000016364	NCBP1	100	90.875	Astyanax_mexicanus
ENSORLG00000011008	NCBP1	99	80.952	ENSBTAG00000009732	NCBP1	99	87.009	Bos_taurus
ENSORLG00000011008	NCBP1	100	36.319	WBGene00018156	ncbp-1	100	36.319	Caenorhabditis_elegans
ENSORLG00000011008	NCBP1	99	80.952	ENSCJAG00000010840	NCBP1	98	86.893	Callithrix_jacchus
ENSORLG00000011008	NCBP1	99	81.078	ENSCAFG00000002445	NCBP1	99	81.454	Canis_familiaris
ENSORLG00000011008	NCBP1	98	81.627	ENSCAFG00020017997	NCBP1	96	88.060	Canis_lupus_dingo
ENSORLG00000011008	NCBP1	99	80.827	ENSCHIG00000020139	NCBP1	99	81.203	Capra_hircus
ENSORLG00000011008	NCBP1	51	86.308	ENSTSYG00000011914	NCBP1	99	86.335	Carlito_syrichta
ENSORLG00000011008	NCBP1	88	73.594	ENSCAPG00000014252	NCBP1	90	73.438	Cavia_aperea
ENSORLG00000011008	NCBP1	98	81.066	ENSCPOG00000012573	NCBP1	98	80.815	Cavia_porcellus
ENSORLG00000011008	NCBP1	99	80.827	ENSCCAG00000032297	NCBP1	99	81.203	Cebus_capucinus
ENSORLG00000011008	NCBP1	99	80.827	ENSCATG00000010052	NCBP1	99	81.203	Cercocebus_atys
ENSORLG00000011008	NCBP1	99	80.827	ENSCLAG00000014339	NCBP1	99	81.203	Chinchilla_lanigera
ENSORLG00000011008	NCBP1	99	80.827	ENSCSAG00000010929	NCBP1	99	81.203	Chlorocebus_sabaeus
ENSORLG00000011008	NCBP1	89	81.132	ENSCHOG00000010332	NCBP1	91	76.271	Choloepus_hoffmanni
ENSORLG00000011008	NCBP1	98	82.749	ENSCPBG00000024344	NCBP1	99	82.329	Chrysemys_picta_bellii
ENSORLG00000011008	NCBP1	99	53.634	ENSCING00000008990	-	99	53.383	Ciona_intestinalis
ENSORLG00000011008	NCBP1	99	53.109	ENSCSAVG00000005300	-	99	53.093	Ciona_savignyi
ENSORLG00000011008	NCBP1	99	80.827	ENSCANG00000036913	NCBP1	99	81.203	Colobus_angolensis_palliatus
ENSORLG00000011008	NCBP1	99	80.576	ENSCGRG00001015771	Ncbp1	99	80.952	Cricetulus_griseus_chok1gshd
ENSORLG00000011008	NCBP1	99	80.711	ENSCGRG00000010311	Ncbp1	99	81.091	Cricetulus_griseus_crigri
ENSORLG00000011008	NCBP1	100	93.742	ENSCSEG00000012377	NCBP1	100	93.742	Cynoglossus_semilaevis
ENSORLG00000011008	NCBP1	100	95.125	ENSCVAG00000008795	NCBP1	100	95.125	Cyprinodon_variegatus
ENSORLG00000011008	NCBP1	99	80.451	ENSDNOG00000006885	NCBP1	99	80.827	Dasypus_novemcinctus
ENSORLG00000011008	NCBP1	98	81.066	ENSDORG00000013652	Ncbp1	99	77.307	Dipodomys_ordii
ENSORLG00000011008	NCBP1	99	57.428	FBgn0022942	Cbp80	99	57.428	Drosophila_melanogaster
ENSORLG00000011008	NCBP1	82	34.168	FBgn0038887	CG7907	87	34.168	Drosophila_melanogaster
ENSORLG00000011008	NCBP1	89	76.180	ENSETEG00000009705	NCBP1	89	76.180	Echinops_telfairi
ENSORLG00000011008	NCBP1	99	72.841	ENSEBUG00000008386	NCBP1	99	72.841	Eptatretus_burgeri
ENSORLG00000011008	NCBP1	99	80.576	ENSEASG00005022795	NCBP1	99	80.952	Equus_asinus_asinus
ENSORLG00000011008	NCBP1	99	80.702	ENSECAG00000013847	NCBP1	99	81.078	Equus_caballus
ENSORLG00000011008	NCBP1	95	77.135	ENSEEUG00000015973	NCBP1	99	77.530	Erinaceus_europaeus
ENSORLG00000011008	NCBP1	100	89.987	ENSELUG00000022519	NCBP1	100	89.987	Esox_lucius
ENSORLG00000011008	NCBP1	99	80.952	ENSFCAG00000001206	NCBP1	99	81.328	Felis_catus
ENSORLG00000011008	NCBP1	98	82.383	ENSFALG00000001193	NCBP1	99	83.038	Ficedula_albicollis
ENSORLG00000011008	NCBP1	99	80.576	ENSFDAG00000010864	NCBP1	99	80.952	Fukomys_damarensis
ENSORLG00000011008	NCBP1	100	94.875	ENSFHEG00000000655	NCBP1	100	94.875	Fundulus_heteroclitus
ENSORLG00000011008	NCBP1	100	91.239	ENSGMOG00000008653	NCBP1	99	91.239	Gadus_morhua
ENSORLG00000011008	NCBP1	98	82.443	ENSGALG00000002087	NCBP1	99	82.875	Gallus_gallus
ENSORLG00000011008	NCBP1	100	95.000	ENSGAFG00000017787	NCBP1	100	95.000	Gambusia_affinis
ENSORLG00000011008	NCBP1	100	93.250	ENSGACG00000016772	NCBP1	99	93.250	Gasterosteus_aculeatus
ENSORLG00000011008	NCBP1	99	82.456	ENSGAGG00000019483	NCBP1	99	82.854	Gopherus_agassizii
ENSORLG00000011008	NCBP1	99	80.827	ENSGGOG00000001376	NCBP1	99	81.203	Gorilla_gorilla
ENSORLG00000011008	NCBP1	100	94.243	ENSHBUG00000020843	NCBP1	100	94.243	Haplochromis_burtoni
ENSORLG00000011008	NCBP1	99	70.750	ENSHGLG00000018112	-	99	70.750	Heterocephalus_glaber_female
ENSORLG00000011008	NCBP1	99	80.702	ENSHGLG00000001882	NCBP1	99	81.078	Heterocephalus_glaber_female
ENSORLG00000011008	NCBP1	99	80.702	ENSHGLG00100013014	NCBP1	99	81.078	Heterocephalus_glaber_male
ENSORLG00000011008	NCBP1	99	70.500	ENSHGLG00100017373	-	99	70.500	Heterocephalus_glaber_male
ENSORLG00000011008	NCBP1	82	87.690	ENSHCOG00000000204	NCBP1	87	87.690	Hippocampus_comes
ENSORLG00000011008	NCBP1	100	88.736	ENSIPUG00000007275	ncbp1	100	88.736	Ictalurus_punctatus
ENSORLG00000011008	NCBP1	99	80.952	ENSSTOG00000002695	NCBP1	99	81.328	Ictidomys_tridecemlineatus
ENSORLG00000011008	NCBP1	100	94.869	ENSKMAG00000003594	NCBP1	100	94.869	Kryptolebias_marmoratus
ENSORLG00000011008	NCBP1	100	93.086	ENSLBEG00000011661	NCBP1	100	93.086	Labrus_bergylta
ENSORLG00000011008	NCBP1	99	77.516	ENSLACG00000013955	NCBP1	99	77.488	Latimeria_chalumnae
ENSORLG00000011008	NCBP1	99	76.580	ENSLOCG00000009579	NCBP1	99	76.580	Lepisosteus_oculatus
ENSORLG00000011008	NCBP1	99	80.702	ENSLAFG00000005999	NCBP1	99	81.078	Loxodonta_africana
ENSORLG00000011008	NCBP1	99	80.827	ENSMFAG00000030994	NCBP1	99	81.203	Macaca_fascicularis
ENSORLG00000011008	NCBP1	98	81.346	ENSMMUG00000012281	NCBP1	99	81.194	Macaca_mulatta
ENSORLG00000011008	NCBP1	99	80.827	ENSMNEG00000042790	NCBP1	99	81.203	Macaca_nemestrina
ENSORLG00000011008	NCBP1	99	80.827	ENSMLEG00000030374	NCBP1	99	81.203	Mandrillus_leucophaeus
ENSORLG00000011008	NCBP1	100	94.869	ENSMAMG00000014806	NCBP1	100	94.869	Mastacembelus_armatus
ENSORLG00000011008	NCBP1	99	92.017	ENSMZEG00005009290	-	100	92.031	Maylandia_zebra
ENSORLG00000011008	NCBP1	100	94.243	ENSMZEG00005003469	NCBP1	100	94.243	Maylandia_zebra
ENSORLG00000011008	NCBP1	99	80.227	ENSMAUG00000020583	Ncbp1	99	80.605	Mesocricetus_auratus
ENSORLG00000011008	NCBP1	99	80.326	ENSMICG00000012682	NCBP1	99	80.702	Microcebus_murinus
ENSORLG00000011008	NCBP1	99	80.451	ENSMOCG00000015818	Ncbp1	99	80.827	Microtus_ochrogaster
ENSORLG00000011008	NCBP1	99	92.157	ENSMMOG00000002610	NCBP1	100	91.586	Mola_mola
ENSORLG00000011008	NCBP1	99	80.075	ENSMODG00000003202	NCBP1	99	80.326	Monodelphis_domestica
ENSORLG00000011008	NCBP1	100	94.493	ENSMALG00000003547	NCBP1	100	94.493	Monopterus_albus
ENSORLG00000011008	NCBP1	99	80.827	MGP_CAROLIEiJ_G0025982	Ncbp1	99	81.203	Mus_caroli
ENSORLG00000011008	NCBP1	99	80.827	ENSMUSG00000028330	Ncbp1	99	81.203	Mus_musculus
ENSORLG00000011008	NCBP1	99	80.827	MGP_PahariEiJ_G0028318	Ncbp1	99	81.203	Mus_pahari
ENSORLG00000011008	NCBP1	99	80.827	MGP_SPRETEiJ_G0026945	Ncbp1	99	81.203	Mus_spretus
ENSORLG00000011008	NCBP1	99	81.203	ENSMPUG00000006399	NCBP1	99	81.579	Mustela_putorius_furo
ENSORLG00000011008	NCBP1	98	80.926	ENSMLUG00000015201	NCBP1	99	80.559	Myotis_lucifugus
ENSORLG00000011008	NCBP1	99	81.454	ENSNGAG00000014101	Ncbp1	99	81.576	Nannospalax_galili
ENSORLG00000011008	NCBP1	76	96.476	ENSNBRG00000014674	NCBP1	97	96.476	Neolamprologus_brichardi
ENSORLG00000011008	NCBP1	99	80.827	ENSNLEG00000016909	NCBP1	99	81.203	Nomascus_leucogenys
ENSORLG00000011008	NCBP1	89	80.167	ENSMEUG00000010672	NCBP1	90	80.167	Notamacropus_eugenii
ENSORLG00000011008	NCBP1	84	73.244	ENSOPRG00000002144	-	88	73.746	Ochotona_princeps
ENSORLG00000011008	NCBP1	99	80.702	ENSODEG00000003232	NCBP1	99	81.078	Octodon_degus
ENSORLG00000011008	NCBP1	100	94.493	ENSONIG00000001502	NCBP1	100	94.493	Oreochromis_niloticus
ENSORLG00000011008	NCBP1	78	84.270	ENSOANG00000001918	NCBP1	100	84.270	Ornithorhynchus_anatinus
ENSORLG00000011008	NCBP1	98	80.485	ENSOCUG00000013853	NCBP1	97	80.867	Oryctolagus_cuniculus
ENSORLG00000011008	NCBP1	100	99.750	ENSORLG00020017455	NCBP1	100	99.750	Oryzias_latipes_hni
ENSORLG00000011008	NCBP1	100	99.875	ENSORLG00015012127	NCBP1	100	99.875	Oryzias_latipes_hsok
ENSORLG00000011008	NCBP1	100	97.997	ENSOMEG00000020698	NCBP1	100	97.997	Oryzias_melastigma
ENSORLG00000011008	NCBP1	99	80.750	ENSOGAG00000013888	NCBP1	99	81.125	Otolemur_garnettii
ENSORLG00000011008	NCBP1	99	80.827	ENSOARG00000011233	NCBP1	99	81.203	Ovis_aries
ENSORLG00000011008	NCBP1	99	80.827	ENSPPAG00000026462	NCBP1	99	81.203	Pan_paniscus
ENSORLG00000011008	NCBP1	99	81.078	ENSPPRG00000022574	NCBP1	99	81.454	Panthera_pardus
ENSORLG00000011008	NCBP1	99	81.078	ENSPTIG00000018507	NCBP1	99	81.454	Panthera_tigris_altaica
ENSORLG00000011008	NCBP1	99	80.827	ENSPTRG00000021167	NCBP1	99	81.203	Pan_troglodytes
ENSORLG00000011008	NCBP1	99	80.827	ENSPANG00000025591	NCBP1	99	81.203	Papio_anubis
ENSORLG00000011008	NCBP1	99	87.218	ENSPKIG00000015861	NCBP1	99	87.218	Paramormyrops_kingsleyae
ENSORLG00000011008	NCBP1	71	80.431	ENSPSIG00000009558	NCBP1	99	80.233	Pelodiscus_sinensis
ENSORLG00000011008	NCBP1	100	88.529	ENSPMGG00000020476	NCBP1	100	88.529	Periophthalmus_magnuspinnatus
ENSORLG00000011008	NCBP1	99	80.326	ENSPEMG00000020105	Ncbp1	99	80.702	Peromyscus_maniculatus_bairdii
ENSORLG00000011008	NCBP1	99	68.075	ENSPMAG00000005533	NCBP1	99	68.075	Petromyzon_marinus
ENSORLG00000011008	NCBP1	99	79.950	ENSPCIG00000015800	NCBP1	99	83.260	Phascolarctos_cinereus
ENSORLG00000011008	NCBP1	100	95.125	ENSPFOG00000004158	NCBP1	100	95.125	Poecilia_formosa
ENSORLG00000011008	NCBP1	100	95.250	ENSPLAG00000020002	NCBP1	100	95.250	Poecilia_latipinna
ENSORLG00000011008	NCBP1	100	95.000	ENSPMEG00000019821	NCBP1	100	95.000	Poecilia_mexicana
ENSORLG00000011008	NCBP1	100	94.750	ENSPREG00000006035	NCBP1	100	94.750	Poecilia_reticulata
ENSORLG00000011008	NCBP1	99	80.827	ENSPPYG00000019426	NCBP1	99	81.203	Pongo_abelii
ENSORLG00000011008	NCBP1	87	88.000	ENSPCAG00000009943	NCBP1	90	79.758	Procavia_capensis
ENSORLG00000011008	NCBP1	89	86.986	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSORLG00000011008	NCBP1	99	80.702	ENSPVAG00000005924	NCBP1	99	81.078	Pteropus_vampyrus
ENSORLG00000011008	NCBP1	99	93.557	ENSPNYG00000002140	NCBP1	99	93.094	Pundamilia_nyererei
ENSORLG00000011008	NCBP1	100	90.125	ENSPNAG00000027753	NCBP1	100	90.125	Pygocentrus_nattereri
ENSORLG00000011008	NCBP1	99	80.827	ENSRNOG00000023605	Ncbp1	99	81.203	Rattus_norvegicus
ENSORLG00000011008	NCBP1	99	80.827	ENSRBIG00000043175	NCBP1	99	81.203	Rhinopithecus_bieti
ENSORLG00000011008	NCBP1	99	80.827	ENSRROG00000029767	NCBP1	99	81.203	Rhinopithecus_roxellana
ENSORLG00000011008	NCBP1	99	80.827	ENSSBOG00000019378	NCBP1	96	87.811	Saimiri_boliviensis_boliviensis
ENSORLG00000011008	NCBP1	99	55.013	ENSSHAG00000015882	NCBP1	99	55.082	Sarcophilus_harrisii
ENSORLG00000011008	NCBP1	98	85.769	ENSSFOG00015001872	NCBP1	99	84.962	Scleropages_formosus
ENSORLG00000011008	NCBP1	100	92.991	ENSSMAG00000007463	NCBP1	100	92.991	Scophthalmus_maximus
ENSORLG00000011008	NCBP1	100	93.617	ENSSDUG00000007019	NCBP1	100	93.997	Seriola_dumerili
ENSORLG00000011008	NCBP1	100	94.493	ENSSLDG00000021924	NCBP1	100	94.493	Seriola_lalandi_dorsalis
ENSORLG00000011008	NCBP1	78	85.000	ENSSARG00000007274	NCBP1	72	85.000	Sorex_araneus
ENSORLG00000011008	NCBP1	99	75.564	ENSSPUG00000008609	NCBP1	99	75.564	Sphenodon_punctatus
ENSORLG00000011008	NCBP1	100	95.494	ENSSPAG00000012550	NCBP1	100	95.494	Stegastes_partitus
ENSORLG00000011008	NCBP1	99	80.827	ENSSSCG00000005366	NCBP1	99	81.203	Sus_scrofa
ENSORLG00000011008	NCBP1	99	77.694	ENSTGUG00000001472	NCBP1	99	78.473	Taeniopygia_guttata
ENSORLG00000011008	NCBP1	100	92.365	ENSTRUG00000005287	NCBP1	100	92.365	Takifugu_rubripes
ENSORLG00000011008	NCBP1	99	78.446	ENSTBEG00000004035	NCBP1	99	78.822	Tupaia_belangeri
ENSORLG00000011008	NCBP1	88	83.744	ENSTTRG00000000507	NCBP1	88	83.744	Tursiops_truncatus
ENSORLG00000011008	NCBP1	99	80.952	ENSUAMG00000005471	NCBP1	99	81.328	Ursus_americanus
ENSORLG00000011008	NCBP1	98	79.383	ENSUMAG00000011865	NCBP1	99	80.897	Ursus_maritimus
ENSORLG00000011008	NCBP1	98	81.627	ENSVPAG00000010537	NCBP1	99	77.820	Vicugna_pacos
ENSORLG00000011008	NCBP1	99	81.078	ENSVVUG00000019725	NCBP1	99	81.454	Vulpes_vulpes
ENSORLG00000011008	NCBP1	99	77.945	ENSXETG00000010179	ncbp1	99	77.694	Xenopus_tropicalis
ENSORLG00000011008	NCBP1	100	94.875	ENSXMAG00000018253	NCBP1	100	94.875	Xiphophorus_maculatus