EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000011174 (Gene tree)
Gene ID: 101161264
Gene Symbol: cnot3a
Alias: -
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 8167 bases
Position: chr16:19353161-19361327
Accession: 101161264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000014018	Not3	PF04065.15	7.2e-97	1	1
ENSORLP00000034768	Not3	PF04065.15	6.9e-94	1	1
ENSORLP00000014018	NOT2_3_5	PF04153.18	2.4e-38	1	1
ENSORLP00000034768	NOT2_3_5	PF04153.18	2.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000038949	-	2938	-	ENSORLP00000034768	963 (aa)	-	-
ENSORLT00000014019	-	2749	XM_023963819	ENSORLP00000014018	900 (aa)	XP_023819587	H2M6C7

Gene Model

Click here to download ENSORLG00000011174's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011174	cnot3a	68	89.836	ENSG00000088038	CNOT3	100	93.299	Homo_sapiens
ENSORLG00000011174	cnot3a	58	90.036	ENSAPOG00000015499	CNOT3	92	90.036	Acanthochromis_polyacanthus
ENSORLG00000011174	cnot3a	58	87.197	ENSAPOG00000015002	cnot3b	76	89.531	Acanthochromis_polyacanthus
ENSORLG00000011174	cnot3a	68	90.164	ENSAMEG00000004528	CNOT3	85	90.164	Ailuropoda_melanoleuca
ENSORLG00000011174	cnot3a	100	86.324	ENSACIG00000006635	cnot3a	100	95.547	Amphilophus_citrinellus
ENSORLG00000011174	cnot3a	60	91.964	ENSACIG00000003652	cnot3b	98	86.611	Amphilophus_citrinellus
ENSORLG00000011174	cnot3a	97	58.868	ENSAOCG00000018385	-	95	80.383	Amphiprion_ocellaris
ENSORLG00000011174	cnot3a	99	81.400	ENSAOCG00000023769	cnot3a	99	86.667	Amphiprion_ocellaris
ENSORLG00000011174	cnot3a	100	89.207	ENSAPEG00000006624	cnot3a	100	88.767	Amphiprion_percula
ENSORLG00000011174	cnot3a	97	62.775	ENSAPEG00000002640	cnot3b	80	85.532	Amphiprion_percula
ENSORLG00000011174	cnot3a	100	87.199	ENSATEG00000022737	cnot3a	100	89.145	Anabas_testudineus
ENSORLG00000011174	cnot3a	70	89.935	ENSACAG00000016085	CNOT3	89	90.164	Anolis_carolinensis
ENSORLG00000011174	cnot3a	70	89.562	ENSANAG00000025756	CNOT3	85	89.836	Aotus_nancymaae
ENSORLG00000011174	cnot3a	100	89.791	ENSACLG00000021136	cnot3a	100	90.340	Astatotilapia_calliptera
ENSORLG00000011174	cnot3a	100	72.941	ENSAMXG00000012359	cnot3a	100	72.384	Astyanax_mexicanus
ENSORLG00000011174	cnot3a	100	65.895	ENSAMXG00000009447	cnot3b	70	88.649	Astyanax_mexicanus
ENSORLG00000011174	cnot3a	69	88.746	ENSBTAG00000014900	CNOT3	86	89.836	Bos_taurus
ENSORLG00000011174	cnot3a	68	89.836	ENSCJAG00000001094	CNOT3	85	89.836	Callithrix_jacchus
ENSORLG00000011174	cnot3a	68	89.836	ENSCAFG00000002699	CNOT3	85	89.836	Canis_familiaris
ENSORLG00000011174	cnot3a	68	89.836	ENSCAFG00020018359	CNOT3	85	89.836	Canis_lupus_dingo
ENSORLG00000011174	cnot3a	64	86.774	ENSCHIG00000015302	CNOT3	76	89.492	Capra_hircus
ENSORLG00000011174	cnot3a	68	89.836	ENSTSYG00000008058	CNOT3	85	89.836	Carlito_syrichta
ENSORLG00000011174	cnot3a	69	88.746	ENSCAPG00000009533	CNOT3	85	89.836	Cavia_aperea
ENSORLG00000011174	cnot3a	69	88.746	ENSCPOG00000020741	CNOT3	85	89.836	Cavia_porcellus
ENSORLG00000011174	cnot3a	68	89.836	ENSCCAG00000036290	CNOT3	85	89.836	Cebus_capucinus
ENSORLG00000011174	cnot3a	68	89.836	ENSCATG00000030324	CNOT3	85	89.836	Cercocebus_atys
ENSORLG00000011174	cnot3a	69	88.746	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSORLG00000011174	cnot3a	68	89.836	ENSCSAG00000001900	CNOT3	85	89.836	Chlorocebus_sabaeus
ENSORLG00000011174	cnot3a	70	89.286	ENSCPBG00000011655	CNOT3	89	89.836	Chrysemys_picta_bellii
ENSORLG00000011174	cnot3a	67	57.862	ENSCING00000000293	-	71	67.769	Ciona_intestinalis
ENSORLG00000011174	cnot3a	69	88.424	ENSCANG00000013408	CNOT3	85	89.836	Colobus_angolensis_palliatus
ENSORLG00000011174	cnot3a	77	78.592	ENSCGRG00001000855	Cnot3	85	90.164	Cricetulus_griseus_chok1gshd
ENSORLG00000011174	cnot3a	51	57.692	ENSCGRG00000012929	Cnot3	67	68.837	Cricetulus_griseus_crigri
ENSORLG00000011174	cnot3a	100	87.243	ENSCSEG00000003574	cnot3a	100	88.108	Cynoglossus_semilaevis
ENSORLG00000011174	cnot3a	100	57.659	ENSCSEG00000016892	cnot3b	70	80.719	Cynoglossus_semilaevis
ENSORLG00000011174	cnot3a	100	86.298	ENSCVAG00000008168	cnot3a	100	86.188	Cyprinodon_variegatus
ENSORLG00000011174	cnot3a	100	74.155	ENSDARG00000007135	cnot3a	100	73.152	Danio_rerio
ENSORLG00000011174	cnot3a	68	89.836	ENSDNOG00000045972	CNOT3	85	89.836	Dasypus_novemcinctus
ENSORLG00000011174	cnot3a	68	89.836	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSORLG00000011174	cnot3a	53	100.000	ENSETEG00000006305	CNOT3	59	100.000	Echinops_telfairi
ENSORLG00000011174	cnot3a	71	73.052	ENSEBUG00000010437	cnot3a	100	70.684	Eptatretus_burgeri
ENSORLG00000011174	cnot3a	68	89.836	ENSEASG00005021591	CNOT3	84	89.836	Equus_asinus_asinus
ENSORLG00000011174	cnot3a	68	89.836	ENSECAG00000023181	CNOT3	84	89.836	Equus_caballus
ENSORLG00000011174	cnot3a	100	78.891	ENSELUG00000014743	cnot3a	100	78.610	Esox_lucius
ENSORLG00000011174	cnot3a	74	79.614	ENSFCAG00000014042	CNOT3	85	89.836	Felis_catus
ENSORLG00000011174	cnot3a	100	83.775	ENSFHEG00000023166	cnot3a	95	98.291	Fundulus_heteroclitus
ENSORLG00000011174	cnot3a	94	77.958	ENSGMOG00000005365	cnot3a	98	76.682	Gadus_morhua
ENSORLG00000011174	cnot3a	100	86.865	ENSGAFG00000013094	cnot3a	100	87.196	Gambusia_affinis
ENSORLG00000011174	cnot3a	94	78.035	ENSGACG00000011489	cnot3a	98	81.002	Gasterosteus_aculeatus
ENSORLG00000011174	cnot3a	74	82.201	ENSGAGG00000012677	CNOT3	94	87.615	Gopherus_agassizii
ENSORLG00000011174	cnot3a	68	89.836	ENSGGOG00000012996	CNOT3	85	89.836	Gorilla_gorilla
ENSORLG00000011174	cnot3a	100	89.901	ENSHBUG00000005275	cnot3a	100	90.450	Haplochromis_burtoni
ENSORLG00000011174	cnot3a	69	88.746	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSORLG00000011174	cnot3a	56	92.511	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSORLG00000011174	cnot3a	100	83.607	ENSHCOG00000020968	cnot3a	100	85.464	Hippocampus_comes
ENSORLG00000011174	cnot3a	100	67.434	ENSIPUG00000000167	cnot3	62	94.444	Ictalurus_punctatus
ENSORLG00000011174	cnot3a	68	89.836	ENSSTOG00000028248	CNOT3	85	89.836	Ictidomys_tridecemlineatus
ENSORLG00000011174	cnot3a	68	90.164	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSORLG00000011174	cnot3a	100	87.555	ENSKMAG00000004863	cnot3a	100	97.024	Kryptolebias_marmoratus
ENSORLG00000011174	cnot3a	53	96.484	ENSLBEG00000017296	cnot3a	65	96.484	Labrus_bergylta
ENSORLG00000011174	cnot3a	96	65.491	ENSLBEG00000018278	cnot3b	72	90.523	Labrus_bergylta
ENSORLG00000011174	cnot3a	69	86.817	ENSLACG00000009742	CNOT3	94	88.197	Latimeria_chalumnae
ENSORLG00000011174	cnot3a	54	91.758	ENSLOCG00000000005	cnot3b	79	91.758	Lepisosteus_oculatus
ENSORLG00000011174	cnot3a	68	89.216	ENSLAFG00000022133	CNOT3	85	89.216	Loxodonta_africana
ENSORLG00000011174	cnot3a	78	89.836	ENSMFAG00000040073	CNOT3	85	89.836	Macaca_fascicularis
ENSORLG00000011174	cnot3a	61	92.017	ENSMMUG00000009698	CNOT3	100	95.098	Macaca_mulatta
ENSORLG00000011174	cnot3a	68	89.836	ENSMNEG00000036750	CNOT3	85	89.836	Macaca_nemestrina
ENSORLG00000011174	cnot3a	68	89.836	ENSMLEG00000036579	CNOT3	84	89.836	Mandrillus_leucophaeus
ENSORLG00000011174	cnot3a	100	87.816	ENSMAMG00000019397	cnot3a	100	88.035	Mastacembelus_armatus
ENSORLG00000011174	cnot3a	100	89.791	ENSMZEG00005016304	cnot3a	100	90.340	Maylandia_zebra
ENSORLG00000011174	cnot3a	77	78.592	ENSMAUG00000014996	Cnot3	85	90.164	Mesocricetus_auratus
ENSORLG00000011174	cnot3a	68	89.836	ENSMICG00000002370	CNOT3	84	89.836	Microcebus_murinus
ENSORLG00000011174	cnot3a	61	89.744	ENSMMOG00000013086	cnot3b	74	87.045	Mola_mola
ENSORLG00000011174	cnot3a	100	84.868	ENSMMOG00000016446	cnot3a	97	93.590	Mola_mola
ENSORLG00000011174	cnot3a	60	89.836	ENSMODG00000004066	CNOT3	73	89.836	Monodelphis_domestica
ENSORLG00000011174	cnot3a	100	87.143	ENSMALG00000009204	cnot3a	100	87.925	Monopterus_albus
ENSORLG00000011174	cnot3a	60	85.574	ENSMALG00000004936	cnot3b	74	87.162	Monopterus_albus
ENSORLG00000011174	cnot3a	78	90.164	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSORLG00000011174	cnot3a	78	90.164	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSORLG00000011174	cnot3a	78	90.164	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSORLG00000011174	cnot3a	78	90.164	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSORLG00000011174	cnot3a	69	88.746	ENSMPUG00000010352	CNOT3	85	89.836	Mustela_putorius_furo
ENSORLG00000011174	cnot3a	68	89.836	ENSNGAG00000013266	Cnot3	85	89.836	Nannospalax_galili
ENSORLG00000011174	cnot3a	88	77.681	ENSNBRG00000003336	cnot3b	95	89.381	Neolamprologus_brichardi
ENSORLG00000011174	cnot3a	100	87.816	ENSNBRG00000002401	cnot3a	100	88.364	Neolamprologus_brichardi
ENSORLG00000011174	cnot3a	68	89.836	ENSNLEG00000006272	CNOT3	84	89.836	Nomascus_leucogenys
ENSORLG00000011174	cnot3a	74	78.788	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSORLG00000011174	cnot3a	100	88.719	ENSONIG00000006568	cnot3a	100	89.814	Oreochromis_niloticus
ENSORLG00000011174	cnot3a	68	89.836	ENSOCUG00000007691	CNOT3	85	89.836	Oryctolagus_cuniculus
ENSORLG00000011174	cnot3a	100	99.446	ENSORLG00020008009	cnot3a	100	99.446	Oryzias_latipes_hni
ENSORLG00000011174	cnot3a	100	66.630	ENSORLG00015019021	cnot3b	57	61.122	Oryzias_latipes_hsok
ENSORLG00000011174	cnot3a	100	99.112	ENSORLG00015013729	cnot3a	100	99.119	Oryzias_latipes_hsok
ENSORLG00000011174	cnot3a	100	96.799	ENSOMEG00000010309	cnot3a	100	96.799	Oryzias_melastigma
ENSORLG00000011174	cnot3a	68	89.836	ENSOGAG00000006945	CNOT3	85	89.836	Otolemur_garnettii
ENSORLG00000011174	cnot3a	64	62.975	ENSOARG00000002981	CNOT3	67	90.909	Ovis_aries
ENSORLG00000011174	cnot3a	68	89.836	ENSPPAG00000002748	CNOT3	85	89.836	Pan_paniscus
ENSORLG00000011174	cnot3a	74	79.614	ENSPPRG00000011705	CNOT3	85	89.836	Panthera_pardus
ENSORLG00000011174	cnot3a	63	88.274	ENSPTIG00000008781	CNOT3	97	88.562	Panthera_tigris_altaica
ENSORLG00000011174	cnot3a	68	89.836	ENSPTRG00000011444	CNOT3	85	89.836	Pan_troglodytes
ENSORLG00000011174	cnot3a	68	89.836	ENSPTRG00000046717	-	85	89.836	Pan_troglodytes
ENSORLG00000011174	cnot3a	68	89.836	ENSPANG00000009375	CNOT3	85	89.836	Papio_anubis
ENSORLG00000011174	cnot3a	97	63.063	ENSPKIG00000015967	-	100	88.627	Paramormyrops_kingsleyae
ENSORLG00000011174	cnot3a	100	65.499	ENSPKIG00000011733	CNOT3	71	58.562	Paramormyrops_kingsleyae
ENSORLG00000011174	cnot3a	74	79.063	ENSPEMG00000024185	Cnot3	85	90.164	Peromyscus_maniculatus_bairdii
ENSORLG00000011174	cnot3a	69	89.508	ENSPCIG00000023018	CNOT3	96	89.508	Phascolarctos_cinereus
ENSORLG00000011174	cnot3a	100	87.445	ENSPFOG00000008693	cnot3a	94	95.410	Poecilia_formosa
ENSORLG00000011174	cnot3a	100	87.969	ENSPLAG00000013324	cnot3a	100	87.969	Poecilia_latipinna
ENSORLG00000011174	cnot3a	100	87.652	ENSPMEG00000017718	cnot3a	100	87.982	Poecilia_mexicana
ENSORLG00000011174	cnot3a	100	85.120	ENSPREG00000007592	cnot3a	100	94.737	Poecilia_reticulata
ENSORLG00000011174	cnot3a	99	60.897	ENSPREG00000000662	cnot3b	50	61.996	Poecilia_reticulata
ENSORLG00000011174	cnot3a	68	89.508	ENSPPYG00000010372	CNOT3	85	89.508	Pongo_abelii
ENSORLG00000011174	cnot3a	53	92.373	ENSPCAG00000011999	CNOT3	56	92.373	Procavia_capensis
ENSORLG00000011174	cnot3a	68	89.836	ENSPCOG00000017673	CNOT3	84	89.836	Propithecus_coquereli
ENSORLG00000011174	cnot3a	69	88.103	ENSPVAG00000015564	CNOT3	85	89.180	Pteropus_vampyrus
ENSORLG00000011174	cnot3a	100	89.791	ENSPNYG00000002282	cnot3a	100	90.340	Pundamilia_nyererei
ENSORLG00000011174	cnot3a	100	73.599	ENSPNAG00000017679	cnot3a	100	73.118	Pygocentrus_nattereri
ENSORLG00000011174	cnot3a	72	89.899	ENSRNOG00000053234	Cnot3	85	90.164	Rattus_norvegicus
ENSORLG00000011174	cnot3a	72	89.562	ENSRBIG00000031025	CNOT3	85	89.836	Rhinopithecus_bieti
ENSORLG00000011174	cnot3a	72	89.562	ENSRROG00000003872	CNOT3	85	89.836	Rhinopithecus_roxellana
ENSORLG00000011174	cnot3a	76	89.836	ENSSBOG00000030268	CNOT3	85	89.836	Saimiri_boliviensis_boliviensis
ENSORLG00000011174	cnot3a	100	69.264	ENSSFOG00015000248	cnot3	57	58.011	Scleropages_formosus
ENSORLG00000011174	cnot3a	100	88.671	ENSSMAG00000013235	cnot3a	100	89.760	Scophthalmus_maximus
ENSORLG00000011174	cnot3a	100	86.543	ENSSDUG00000008181	cnot3a	100	95.142	Seriola_dumerili
ENSORLG00000011174	cnot3a	96	88.409	ENSSLDG00000014733	cnot3a	99	90.455	Seriola_lalandi_dorsalis
ENSORLG00000011174	cnot3a	79	89.610	ENSSPUG00000008510	CNOT3	89	89.836	Sphenodon_punctatus
ENSORLG00000011174	cnot3a	96	89.659	ENSSPAG00000003858	cnot3a	93	97.872	Stegastes_partitus
ENSORLG00000011174	cnot3a	68	89.836	ENSSSCG00000003264	CNOT3	84	89.836	Sus_scrofa
ENSORLG00000011174	cnot3a	100	87.349	ENSTRUG00000015732	cnot3a	100	87.569	Takifugu_rubripes
ENSORLG00000011174	cnot3a	68	90.164	ENSUAMG00000005234	CNOT3	85	90.164	Ursus_americanus
ENSORLG00000011174	cnot3a	66	82.779	ENSUMAG00000010934	CNOT3	89	92.437	Ursus_maritimus
ENSORLG00000011174	cnot3a	68	89.836	ENSVVUG00000008239	CNOT3	84	89.836	Vulpes_vulpes
ENSORLG00000011174	cnot3a	70	86.901	ENSXETG00000003166	cnot3	95	88.710	Xenopus_tropicalis
ENSORLG00000011174	cnot3a	100	81.057	ENSXCOG00000019460	cnot3a	95	98.718	Xiphophorus_couchianus
ENSORLG00000011174	cnot3a	100	86.630	ENSXMAG00000012273	cnot3a	100	85.210	Xiphophorus_maculatus