EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000011545 (Gene tree)
Gene ID
101165173
Gene Symbol
u2af2a
Alias
-
Full Name
U2 small nuclear RNA auxiliary factor 2
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
5184 bases
Position
chr16:19811167-19816350
Accession
101165173
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000033847RRM_1PF00076.225.2e-3613
ENSORLP00000033847RRM_1PF00076.225.2e-3623
ENSORLP00000033847RRM_1PF00076.225.2e-3633
ENSORLP00000014464RRM_1PF00076.227.4e-3613
ENSORLP00000014464RRM_1PF00076.227.4e-3623
ENSORLP00000014464RRM_1PF00076.227.4e-3633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000014465-2212XM_004077942ENSORLP00000014464470 (aa)XP_004077990H2M7K7
ENSORLT00000044831-1320-ENSORLP00000033847439 (aa)--
Gene Model
Click here to download ENSORLG00000011545's gene model file
Pathways
Pathway IDPathway NameSource
ola03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011545's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000011545u2af2a7240.196ENSORLG00000028655-5938.235
ENSORLG00000011545u2af2a6939.216ENSORLG00000012279puf60b5637.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000011545u2af2a10087.261ENSG00000063244U2AF29995.294Homo_sapiens
ENSORLG00000011545u2af2a9973.774ENSAPOG00000002208-10074.310Acanthochromis_polyacanthus
ENSORLG00000011545u2af2a7093.808ENSAPOG00000023155u2af2a10093.808Acanthochromis_polyacanthus
ENSORLG00000011545u2af2a8290.556ENSAMEG00000003864U2AF29188.472Ailuropoda_melanoleuca
ENSORLG00000011545u2af2a9773.043ENSACIG00000014173-9077.014Amphilophus_citrinellus
ENSORLG00000011545u2af2a9897.680ENSACIG00000005749u2af2a10097.680Amphilophus_citrinellus
ENSORLG00000011545u2af2a9997.945ENSAOCG00000015571u2af2a10096.596Amphiprion_ocellaris
ENSORLG00000011545u2af2a9973.774ENSAOCG00000003595-10074.310Amphiprion_ocellaris
ENSORLG00000011545u2af2a9874.229ENSAPEG00000020062-8580.905Amphiprion_percula
ENSORLG00000011545u2af2a9298.030ENSAPEG00000009376u2af2a9598.756Amphiprion_percula
ENSORLG00000011545u2af2a10095.344ENSATEG00000022332u2af2a10094.480Anabas_testudineus
ENSORLG00000011545u2af2a9774.279ENSATEG00000020577-9078.692Anabas_testudineus
ENSORLG00000011545u2af2a10087.315ENSACAG00000015489U2AF210087.526Anolis_carolinensis
ENSORLG00000011545u2af2a10085.515ENSANAG00000028042U2AF210092.857Aotus_nancymaae
ENSORLG00000011545u2af2a9973.774ENSACLG00000020793-10074.310Astatotilapia_calliptera
ENSORLG00000011545u2af2a9897.685ENSACLG00000022181u2af2a10097.685Astatotilapia_calliptera
ENSORLG00000011545u2af2a9987.872ENSAMXG00000039454u2af2b9987.872Astyanax_mexicanus
ENSORLG00000011545u2af2a10087.110ENSAMXG00000033347u2af2a10088.797Astyanax_mexicanus
ENSORLG00000011545u2af2a10087.021ENSBTAG00000002830U2AF210087.872Bos_taurus
ENSORLG00000011545u2af2a9158.500WBGene00006697uaf-110053.378Caenorhabditis_elegans
ENSORLG00000011545u2af2a10086.737ENSCJAG00000017128U2AF210086.820Callithrix_jacchus
ENSORLG00000011545u2af2a10087.261ENSCAFG00000002551U2AF210087.342Canis_familiaris
ENSORLG00000011545u2af2a9093.233ENSCAFG00020015445U2AF28988.759Canis_lupus_dingo
ENSORLG00000011545u2af2a9078.803ENSCHIG00000023595U2AF29077.108Capra_hircus
ENSORLG00000011545u2af2a10086.737ENSTSYG00000007432U2AF210086.820Carlito_syrichta
ENSORLG00000011545u2af2a9291.892ENSCAPG00000008466U2AF29290.000Cavia_aperea
ENSORLG00000011545u2af2a10086.737ENSCPOG00000001582U2AF210086.820Cavia_porcellus
ENSORLG00000011545u2af2a10086.737ENSCCAG00000023336U2AF210086.820Cebus_capucinus
ENSORLG00000011545u2af2a10087.261ENSCATG00000004637U2AF210087.342Cercocebus_atys
ENSORLG00000011545u2af2a10087.261ENSCLAG00000000596U2AF210087.342Chinchilla_lanigera
ENSORLG00000011545u2af2a10087.261ENSCSAG00000001722U2AF210087.342Chlorocebus_sabaeus
ENSORLG00000011545u2af2a8992.443ENSCPBG00000004485U2AF210094.137Chrysemys_picta_bellii
ENSORLG00000011545u2af2a8970.000ENSCING00000003455-8467.961Ciona_intestinalis
ENSORLG00000011545u2af2a8869.072ENSCSAVG00000006813-9164.085Ciona_savignyi
ENSORLG00000011545u2af2a10081.184ENSCANG00000043845-10081.184Colobus_angolensis_palliatus
ENSORLG00000011545u2af2a9186.215ENSCANG00000031002-9686.311Colobus_angolensis_palliatus
ENSORLG00000011545u2af2a9979.744ENSCGRG00001007486-9979.744Cricetulus_griseus_chok1gshd
ENSORLG00000011545u2af2a10086.809ENSCGRG00001003185-10087.660Cricetulus_griseus_chok1gshd
ENSORLG00000011545u2af2a5292.174ENSCGRG00000004524-7988.115Cricetulus_griseus_crigri
ENSORLG00000011545u2af2a9979.744ENSCGRG00000018587-9979.744Cricetulus_griseus_crigri
ENSORLG00000011545u2af2a7596.178ENSCSEG00000018709u2af2a9596.178Cynoglossus_semilaevis
ENSORLG00000011545u2af2a9974.142ENSCSEG00000020504-9374.580Cynoglossus_semilaevis
ENSORLG00000011545u2af2a10097.950ENSCVAG00000001259u2af2a10096.178Cyprinodon_variegatus
ENSORLG00000011545u2af2a9973.774ENSCVAG00000023307-10074.310Cyprinodon_variegatus
ENSORLG00000011545u2af2a10087.185ENSDARG00000012505u2af2a10089.937Danio_rerio
ENSORLG00000011545u2af2a10090.814ENSDARG00000011740u2af2b10089.144Danio_rerio
ENSORLG00000011545u2af2a9186.215ENSDNOG00000047039U2AF29686.311Dasypus_novemcinctus
ENSORLG00000011545u2af2a10086.737ENSDORG00000003250U2af210086.820Dipodomys_ordii
ENSORLG00000011545u2af2a8871.867FBgn0005411U2af5010071.698Drosophila_melanogaster
ENSORLG00000011545u2af2a9350.572FBgn0034834LS28553.149Drosophila_melanogaster
ENSORLG00000011545u2af2a9458.371ENSEBUG00000001732U2AF29559.719Eptatretus_burgeri
ENSORLG00000011545u2af2a9375.182ENSEBUG00000010917U2AF29274.101Eptatretus_burgeri
ENSORLG00000011545u2af2a9291.220ENSEASG00005020708U2AF28289.952Equus_asinus_asinus
ENSORLG00000011545u2af2a10086.809ENSECAG00000010110U2AF210087.660Equus_caballus
ENSORLG00000011545u2af2a10088.939ENSELUG00000022291u2af2b10085.684Esox_lucius
ENSORLG00000011545u2af2a9972.921ENSELUG00000018459-10071.338Esox_lucius
ENSORLG00000011545u2af2a10091.667ENSELUG00000015850u2af2a10091.458Esox_lucius
ENSORLG00000011545u2af2a10086.737ENSFCAG00000011504U2AF210086.820Felis_catus
ENSORLG00000011545u2af2a9291.892ENSFDAG00000011264U2AF28890.000Fukomys_damarensis
ENSORLG00000011545u2af2a10097.950ENSFHEG00000016025u2af2a10095.117Fundulus_heteroclitus
ENSORLG00000011545u2af2a10091.525ENSGMOG00000004535u2af2a10091.368Gadus_morhua
ENSORLG00000011545u2af2a9887.202ENSGALG00000052748U2AF26587.202Gallus_gallus
ENSORLG00000011545u2af2a9972.842ENSGAFG00000005628-10073.774Gambusia_affinis
ENSORLG00000011545u2af2a10097.950ENSGAFG00000013626u2af2a8896.178Gambusia_affinis
ENSORLG00000011545u2af2a9974.473ENSGACG00000014500-10072.727Gasterosteus_aculeatus
ENSORLG00000011545u2af2a10096.818ENSGACG00000010632U2AF29696.818Gasterosteus_aculeatus
ENSORLG00000011545u2af2a7094.137ENSGAGG00000011849U2AF210094.137Gopherus_agassizii
ENSORLG00000011545u2af2a5982.490ENSGGOG00000036399-9682.490Gorilla_gorilla
ENSORLG00000011545u2af2a9897.680ENSHBUG00000013935u2af2a10097.680Haplochromis_burtoni
ENSORLG00000011545u2af2a9973.774ENSHBUG00000017424-10074.310Haplochromis_burtoni
ENSORLG00000011545u2af2a10086.737ENSHGLG00000005889U2AF210086.820Heterocephalus_glaber_female
ENSORLG00000011545u2af2a9291.892ENSHGLG00100004757U2AF29290.000Heterocephalus_glaber_male
ENSORLG00000011545u2af2a10092.259ENSHCOG00000019367u2af2a10092.259Hippocampus_comes
ENSORLG00000011545u2af2a9986.596ENSIPUG00000009077u2af29988.679Ictalurus_punctatus
ENSORLG00000011545u2af2a10085.443ENSIPUG00000007717u2af2a10088.421Ictalurus_punctatus
ENSORLG00000011545u2af2a9973.288ENSIPUG00000009844-10070.362Ictalurus_punctatus
ENSORLG00000011545u2af2a10086.737ENSSTOG00000019595U2AF210086.820Ictidomys_tridecemlineatus
ENSORLG00000011545u2af2a10086.737ENSJJAG00000017705U2af210086.820Jaculus_jaculus
ENSORLG00000011545u2af2a10098.405ENSKMAG00000005960u2af2a9998.405Kryptolebias_marmoratus
ENSORLG00000011545u2af2a9772.609ENSLBEG00000005001-9076.540Labrus_bergylta
ENSORLG00000011545u2af2a10097.494ENSLBEG00000016162u2af2a10094.904Labrus_bergylta
ENSORLG00000011545u2af2a8494.550ENSLACG00000001648U2AF210094.550Latimeria_chalumnae
ENSORLG00000011545u2af2a9479.369ENSLOCG00000010843-10073.348Lepisosteus_oculatus
ENSORLG00000011545u2af2a6396.014ENSLOCG00000008050u2af2b8691.639Lepisosteus_oculatus
ENSORLG00000011545u2af2a10087.686ENSLAFG00000018056-10087.686Loxodonta_africana
ENSORLG00000011545u2af2a10078.366ENSLAFG00000028496-10076.956Loxodonta_africana
ENSORLG00000011545u2af2a10086.737ENSMFAG00000038383U2AF210086.820Macaca_fascicularis
ENSORLG00000011545u2af2a10086.526ENSMMUG00000004810U2AF210086.611Macaca_mulatta
ENSORLG00000011545u2af2a10087.261ENSMNEG00000042096U2AF210087.342Macaca_nemestrina
ENSORLG00000011545u2af2a9292.556ENSMLEG00000032219U2AF28190.625Mandrillus_leucophaeus
ENSORLG00000011545u2af2a9972.766ENSMAMG00000020158-10073.248Mastacembelus_armatus
ENSORLG00000011545u2af2a10095.388ENSMAMG00000019817u2af2a10095.388Mastacembelus_armatus
ENSORLG00000011545u2af2a9973.774ENSMZEG00005023318-10074.310Maylandia_zebra
ENSORLG00000011545u2af2a10097.722ENSMZEG00005016563u2af2a10095.117Maylandia_zebra
ENSORLG00000011545u2af2a9291.892ENSMAUG00000008180U2af29090.000Mesocricetus_auratus
ENSORLG00000011545u2af2a10087.261ENSMICG00000027681U2AF210087.342Microcebus_murinus
ENSORLG00000011545u2af2a7091.531ENSMOCG00000001018-10091.531Microtus_ochrogaster
ENSORLG00000011545u2af2a10081.473ENSMOCG00000007227-10079.114Microtus_ochrogaster
ENSORLG00000011545u2af2a10086.737ENSMOCG00000013214-10086.820Microtus_ochrogaster
ENSORLG00000011545u2af2a9966.939ENSMMOG00000000531-10066.942Mola_mola
ENSORLG00000011545u2af2a9997.465ENSMMOG00000016600u2af2a10097.465Mola_mola
ENSORLG00000011545u2af2a10097.722ENSMALG00000009985u2af2a10096.603Monopterus_albus
ENSORLG00000011545u2af2a10087.261MGP_CAROLIEiJ_G0029150U2af210087.342Mus_caroli
ENSORLG00000011545u2af2a10087.261ENSMUSG00000030435U2af210094.137Mus_musculus
ENSORLG00000011545u2af2a10087.261MGP_PahariEiJ_G0021017U2af210087.342Mus_pahari
ENSORLG00000011545u2af2a10087.261MGP_SPRETEiJ_G0030203U2af210087.342Mus_spretus
ENSORLG00000011545u2af2a10087.261ENSMPUG00000007135U2AF210087.342Mustela_putorius_furo
ENSORLG00000011545u2af2a5487.552ENSMLUG00000011051-10087.552Myotis_lucifugus
ENSORLG00000011545u2af2a10086.737ENSNGAG00000020369U2af210086.820Nannospalax_galili
ENSORLG00000011545u2af2a9897.680ENSNBRG00000002568u2af2a10097.680Neolamprologus_brichardi
ENSORLG00000011545u2af2a9773.043ENSNBRG00000011100-9077.251Neolamprologus_brichardi
ENSORLG00000011545u2af2a10073.950ENSNLEG00000010562U2AF210094.137Nomascus_leucogenys
ENSORLG00000011545u2af2a8979.847ENSMEUG00000002346U2AF29177.053Notamacropus_eugenii
ENSORLG00000011545u2af2a10063.781ENSODEG00000009254-10060.625Octodon_degus
ENSORLG00000011545u2af2a10081.684ENSODEG00000012729-10081.799Octodon_degus
ENSORLG00000011545u2af2a10094.493ENSONIG00000012793u2af2a10092.827Oreochromis_niloticus
ENSORLG00000011545u2af2a9973.774ENSONIG00000009682-10074.310Oreochromis_niloticus
ENSORLG00000011545u2af2a100100.000ENSORLG00020006941u2af2a100100.000Oryzias_latipes_hni
ENSORLG00000011545u2af2a100100.000ENSORLG00015012843u2af2a100100.000Oryzias_latipes_hsok
ENSORLG00000011545u2af2a10098.936ENSOMEG00000011386u2af2a10099.085Oryzias_melastigma
ENSORLG00000011545u2af2a10054.305ENSOGAG00000034729-8061.828Otolemur_garnettii
ENSORLG00000011545u2af2a10086.737ENSOGAG00000007206-10086.820Otolemur_garnettii
ENSORLG00000011545u2af2a9881.208ENSOARG00000001091U2AF210077.547Ovis_aries
ENSORLG00000011545u2af2a10086.737ENSPPAG00000039782U2AF210086.820Pan_paniscus
ENSORLG00000011545u2af2a10086.737ENSPPRG00000013843U2AF210086.820Panthera_pardus
ENSORLG00000011545u2af2a10080.222ENSPTIG00000005489U2AF28886.486Panthera_tigris_altaica
ENSORLG00000011545u2af2a10086.737ENSPTRG00000011523U2AF210094.137Pan_troglodytes
ENSORLG00000011545u2af2a10087.261ENSPANG00000008459U2AF210087.342Papio_anubis
ENSORLG00000011545u2af2a10090.021ENSPKIG00000024346u2af2b9395.782Paramormyrops_kingsleyae
ENSORLG00000011545u2af2a9976.430ENSPKIG00000014878-10074.098Paramormyrops_kingsleyae
ENSORLG00000011545u2af2a9071.707ENSPSIG00000008014U2AF29170.163Pelodiscus_sinensis
ENSORLG00000011545u2af2a10088.641ENSPMGG00000022980u2af2a9190.291Periophthalmus_magnuspinnatus
ENSORLG00000011545u2af2a10086.737ENSPEMG00000007378U2af210094.137Peromyscus_maniculatus_bairdii
ENSORLG00000011545u2af2a8677.604ENSPMAG00000004097u2af2a9673.363Petromyzon_marinus
ENSORLG00000011545u2af2a10087.158ENSPCIG00000018013U2AF210087.158Phascolarctos_cinereus
ENSORLG00000011545u2af2a9996.170ENSPFOG00000010799u2af2a10096.170Poecilia_formosa
ENSORLG00000011545u2af2a9973.729ENSPFOG00000006433-10074.522Poecilia_formosa
ENSORLG00000011545u2af2a9081.061ENSPLAG00000003275-9078.935Poecilia_latipinna
ENSORLG00000011545u2af2a10097.950ENSPLAG00000014365u2af2a10096.178Poecilia_latipinna
ENSORLG00000011545u2af2a9080.808ENSPMEG00000003734-9078.692Poecilia_mexicana
ENSORLG00000011545u2af2a10097.950ENSPMEG00000002969u2af2a10096.178Poecilia_mexicana
ENSORLG00000011545u2af2a9973.561ENSPREG00000013036-10075.676Poecilia_reticulata
ENSORLG00000011545u2af2a10097.950ENSPREG00000008739u2af2a9997.950Poecilia_reticulata
ENSORLG00000011545u2af2a6290.975ENSPPYG00000010429-7890.975Pongo_abelii
ENSORLG00000011545u2af2a10070.168ENSPCAG00000014399-10070.355Procavia_capensis
ENSORLG00000011545u2af2a8979.847ENSPCAG00000003709-9679.847Procavia_capensis
ENSORLG00000011545u2af2a10086.737ENSPCOG00000025870U2AF210086.820Propithecus_coquereli
ENSORLG00000011545u2af2a10086.526ENSPVAG00000004540U2AF210086.611Pteropus_vampyrus
ENSORLG00000011545u2af2a9973.774ENSPNYG00000011605-10074.310Pundamilia_nyererei
ENSORLG00000011545u2af2a9897.680ENSPNYG00000001438u2af2a10097.680Pundamilia_nyererei
ENSORLG00000011545u2af2a9394.634ENSPNAG00000017620u2af2a10090.526Pygocentrus_nattereri
ENSORLG00000011545u2af2a9974.627ENSPNAG00000007182-10074.310Pygocentrus_nattereri
ENSORLG00000011545u2af2a9988.298ENSPNAG00000027289u2af2b9989.362Pygocentrus_nattereri
ENSORLG00000011545u2af2a10087.261ENSRNOG00000015914U2af210087.342Rattus_norvegicus
ENSORLG00000011545u2af2a10086.526ENSRBIG00000041018U2AF210086.611Rhinopithecus_bieti
ENSORLG00000011545u2af2a10083.051ENSRROG00000031238-10082.278Rhinopithecus_roxellana
ENSORLG00000011545u2af2a8291.460ENSRROG00000031103-9189.362Rhinopithecus_roxellana
ENSORLG00000011545u2af2a10087.261ENSSBOG00000023891U2AF210087.342Saimiri_boliviensis_boliviensis
ENSORLG00000011545u2af2a6075.806ENSSHAG00000001167U2AF26680.420Sarcophilus_harrisii
ENSORLG00000011545u2af2a9196.241ENSSFOG00015019182u2af2b9096.241Scleropages_formosus
ENSORLG00000011545u2af2a9975.476ENSSFOG00015003884-9579.950Scleropages_formosus
ENSORLG00000011545u2af2a9973.987ENSSMAG00000013779-10074.310Scophthalmus_maximus
ENSORLG00000011545u2af2a10096.811ENSSMAG00000012582u2af2a10094.268Scophthalmus_maximus
ENSORLG00000011545u2af2a9772.727ENSSDUG00000021434-8676.887Seriola_dumerili
ENSORLG00000011545u2af2a9997.717ENSSDUG00000009457u2af2a10096.383Seriola_dumerili
ENSORLG00000011545u2af2a9772.727ENSSLDG00000016151-9076.887Seriola_lalandi_dorsalis
ENSORLG00000011545u2af2a10097.722ENSSLDG00000022742u2af2a10096.391Seriola_lalandi_dorsalis
ENSORLG00000011545u2af2a10086.042ENSSPUG00000010229U2AF210086.250Sphenodon_punctatus
ENSORLG00000011545u2af2a9973.987ENSSPAG00000005241-10074.522Stegastes_partitus
ENSORLG00000011545u2af2a10097.950ENSSPAG00000022519u2af2a10096.603Stegastes_partitus
ENSORLG00000011545u2af2a10087.261ENSSSCG00000034815U2AF210087.660Sus_scrofa
ENSORLG00000011545u2af2a10095.444ENSTRUG00000005514u2af2a9895.444Takifugu_rubripes
ENSORLG00000011545u2af2a9079.093ENSTNIG00000011257-10072.766Tetraodon_nigroviridis
ENSORLG00000011545u2af2a10095.111ENSTNIG00000008106U2AF210093.220Tetraodon_nigroviridis
ENSORLG00000011545u2af2a8286.813ENSTBEG00000009104U2AF29887.052Tupaia_belangeri
ENSORLG00000011545u2af2a10086.737ENSTTRG00000000987U2AF210086.820Tursiops_truncatus
ENSORLG00000011545u2af2a9093.467ENSUAMG00000019883U2AF29289.786Ursus_americanus
ENSORLG00000011545u2af2a9093.467ENSUMAG00000024586U2AF210094.137Ursus_maritimus
ENSORLG00000011545u2af2a9292.556ENSVVUG00000006956U2AF26093.734Vulpes_vulpes
ENSORLG00000011545u2af2a10085.386ENSXETG00000019128u2af210086.013Xenopus_tropicalis
ENSORLG00000011545u2af2a10097.950ENSXCOG00000019406u2af2a9997.950Xiphophorus_couchianus
ENSORLG00000011545u2af2a9973.987ENSXMAG00000000768-9673.885Xiphophorus_maculatus
ENSORLG00000011545u2af2a10097.950ENSXMAG00000011979u2af2a10096.178Xiphophorus_maculatus

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