EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000011575 (Gene tree)
Gene ID: 101172804
Gene Symbol: zmat3
Alias: -
Full Name: zinc finger matrin-type 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11968 bases
Position: chr4:18265185-18277152
Accession: 101172804
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000014500	zf-met	PF12874.7	9.3e-22	1	3
ENSORLP00000014500	zf-met	PF12874.7	9.3e-22	2	3
ENSORLP00000014500	zf-met	PF12874.7	9.3e-22	3	3
ENSORLP00000014500	zf-C2H2_jaz	PF12171.8	2e-19	1	3
ENSORLP00000014500	zf-C2H2_jaz	PF12171.8	2e-19	2	3
ENSORLP00000014500	zf-C2H2_jaz	PF12171.8	2e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000014501	-	1772	XM_011474183	ENSORLP00000014500	490 (aa)	XP_011472485	H2M7P2

Gene Model

Click here to download ENSORLG00000011575's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04115	p53 signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011575	zmat3	100	81.414	ENSAPOG00000015037	zmat3	100	81.414	Acanthochromis_polyacanthus
ENSORLG00000011575	zmat3	80	69.811	ENSACIG00000023037	zmat3	99	68.314	Amphilophus_citrinellus
ENSORLG00000011575	zmat3	100	81.818	ENSAOCG00000017955	zmat3	100	82.020	Amphiprion_ocellaris
ENSORLG00000011575	zmat3	57	83.274	ENSAPEG00000014553	zmat3	97	83.274	Amphiprion_percula
ENSORLG00000011575	zmat3	54	81.439	ENSATEG00000022244	zmat3	90	81.961	Anabas_testudineus
ENSORLG00000011575	zmat3	58	60.410	ENSAPLG00000013292	ZMAT3	80	67.782	Anas_platyrhynchos
ENSORLG00000011575	zmat3	51	65.098	ENSACAG00000005005	ZMAT3	83	66.008	Anolis_carolinensis
ENSORLG00000011575	zmat3	100	80.808	ENSACLG00000026272	zmat3	98	86.486	Astatotilapia_calliptera
ENSORLG00000011575	zmat3	91	57.865	ENSAMXG00000009798	zmat3	92	73.444	Astyanax_mexicanus
ENSORLG00000011575	zmat3	99	69.715	ENSCSEG00000019463	zmat3	99	69.512	Cynoglossus_semilaevis
ENSORLG00000011575	zmat3	100	77.062	ENSCVAG00000011847	zmat3	100	76.908	Cyprinodon_variegatus
ENSORLG00000011575	zmat3	75	64.094	ENSDARG00000080021	zmat3	94	71.429	Danio_rerio
ENSORLG00000011575	zmat3	64	74.502	ENSELUG00000010132	zmat3	84	74.502	Esox_lucius
ENSORLG00000011575	zmat3	58	59.794	ENSFALG00000008403	ZMAT3	80	66.946	Ficedula_albicollis
ENSORLG00000011575	zmat3	61	81.041	ENSFHEG00000003221	zmat3	99	86.400	Fundulus_heteroclitus
ENSORLG00000011575	zmat3	51	76.000	ENSGMOG00000008558	zmat3	100	76.000	Gadus_morhua
ENSORLG00000011575	zmat3	58	60.554	ENSGALG00000040948	ZMAT3	89	67.782	Gallus_gallus
ENSORLG00000011575	zmat3	56	78.623	ENSGACG00000006175	zmat3	95	82.745	Gasterosteus_aculeatus
ENSORLG00000011575	zmat3	100	81.212	ENSHBUG00000004401	zmat3	99	83.529	Haplochromis_burtoni
ENSORLG00000011575	zmat3	69	70.118	ENSHCOG00000010624	zmat3	100	69.501	Hippocampus_comes
ENSORLG00000011575	zmat3	98	55.966	ENSIPUG00000003043	zmat3	90	68.033	Ictalurus_punctatus
ENSORLG00000011575	zmat3	50	64.822	ENSJJAG00000004288	Zmat3	83	65.726	Jaculus_jaculus
ENSORLG00000011575	zmat3	100	80.606	ENSKMAG00000008962	zmat3	100	80.808	Kryptolebias_marmoratus
ENSORLG00000011575	zmat3	61	81.181	ENSLBEG00000001993	zmat3	99	83.730	Labrus_bergylta
ENSORLG00000011575	zmat3	59	54.902	ENSLACG00000015780	ZMAT3	67	61.660	Latimeria_chalumnae
ENSORLG00000011575	zmat3	100	77.576	ENSMAMG00000012349	zmat3	100	88.571	Mastacembelus_armatus
ENSORLG00000011575	zmat3	91	81.333	ENSMZEG00005015427	zmat3	100	85.600	Maylandia_zebra
ENSORLG00000011575	zmat3	58	60.900	ENSMGAG00000009873	ZMAT3	80	67.782	Meleagris_gallopavo
ENSORLG00000011575	zmat3	68	76.119	ENSMMOG00000001603	zmat3	100	76.119	Mola_mola
ENSORLG00000011575	zmat3	100	75.758	ENSMALG00000019683	zmat3	96	79.443	Monopterus_albus
ENSORLG00000011575	zmat3	56	60.410	ENSMLUG00000013074	ZMAT3	78	67.373	Myotis_lucifugus
ENSORLG00000011575	zmat3	60	67.949	ENSNGAG00000023602	Zmat3	80	67.227	Nannospalax_galili
ENSORLG00000011575	zmat3	66	78.201	ENSNBRG00000020886	zmat3	99	83.529	Neolamprologus_brichardi
ENSORLG00000011575	zmat3	68	73.964	ENSONIG00000008388	zmat3	99	75.449	Oreochromis_niloticus
ENSORLG00000011575	zmat3	57	49.167	ENSOANG00000009901	ZMAT3	59	61.350	Ornithorhynchus_anatinus
ENSORLG00000011575	zmat3	100	98.367	ENSORLG00020005858	zmat3	100	98.367	Oryzias_latipes_hni
ENSORLG00000011575	zmat3	100	98.571	ENSORLG00015003707	zmat3	100	98.571	Oryzias_latipes_hsok
ENSORLG00000011575	zmat3	100	95.306	ENSOMEG00000011303	zmat3	100	95.306	Oryzias_melastigma
ENSORLG00000011575	zmat3	52	63.118	ENSPANG00000023167	ZMAT3	80	67.227	Papio_anubis
ENSORLG00000011575	zmat3	71	70.518	ENSPKIG00000023370	zmat3	95	70.518	Paramormyrops_kingsleyae
ENSORLG00000011575	zmat3	54	73.962	ENSPMGG00000023924	zmat3	89	76.400	Periophthalmus_magnuspinnatus
ENSORLG00000011575	zmat3	90	74.521	ENSPFOG00000019206	zmat3	100	75.698	Poecilia_formosa
ENSORLG00000011575	zmat3	62	82.129	ENSPLAG00000022572	zmat3	99	84.400	Poecilia_latipinna
ENSORLG00000011575	zmat3	64	69.310	ENSPMEG00000004131	-	100	71.053	Poecilia_mexicana
ENSORLG00000011575	zmat3	100	77.328	ENSPREG00000022632	zmat3	99	85.200	Poecilia_reticulata
ENSORLG00000011575	zmat3	66	78.201	ENSPNYG00000014350	zmat3	99	83.529	Pundamilia_nyererei
ENSORLG00000011575	zmat3	77	64.883	ENSPNAG00000015664	zmat3	96	70.656	Pygocentrus_nattereri
ENSORLG00000011575	zmat3	51	70.518	ENSSFOG00015006984	zmat3	88	63.287	Scleropages_formosus
ENSORLG00000011575	zmat3	92	74.565	ENSSMAG00000019540	-	99	76.096	Scophthalmus_maximus
ENSORLG00000011575	zmat3	68	78.806	ENSSDUG00000016188	zmat3	100	78.806	Seriola_dumerili
ENSORLG00000011575	zmat3	99	79.268	ENSSLDG00000018611	zmat3	100	78.806	Seriola_lalandi_dorsalis
ENSORLG00000011575	zmat3	67	80.851	ENSSPAG00000011062	zmat3	100	80.851	Stegastes_partitus
ENSORLG00000011575	zmat3	58	61.324	ENSSSCG00000033860	ZMAT3	80	68.908	Sus_scrofa
ENSORLG00000011575	zmat3	58	59.386	ENSTGUG00000010765	-	80	66.946	Taeniopygia_guttata
ENSORLG00000011575	zmat3	64	72.204	ENSTRUG00000004788	zmat3	86	82.800	Takifugu_rubripes
ENSORLG00000011575	zmat3	54	81.439	ENSTNIG00000006781	zmat3	100	78.472	Tetraodon_nigroviridis
ENSORLG00000011575	zmat3	53	58.779	ENSXETG00000007251	zmat3	77	63.830	Xenopus_tropicalis
ENSORLG00000011575	zmat3	57	78.571	ENSXCOG00000008397	zmat3	86	84.000	Xiphophorus_couchianus
ENSORLG00000011575	zmat3	100	76.113	ENSXMAG00000015188	zmat3	100	76.721	Xiphophorus_maculatus