EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000011589 (Gene tree)
Gene ID: 101169980
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6056 bases
Position: chr18:28894940-28900995
Accession: 101169980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000014523	RRM_5	PF13893.6	1.2e-09	1	2
ENSORLP00000014523	RRM_5	PF13893.6	1.2e-09	2	2
ENSORLP00000027307	RRM_5	PF13893.6	1.3e-09	1	2
ENSORLP00000027307	RRM_5	PF13893.6	1.3e-09	2	2
ENSORLP00000014523	RRM_1	PF00076.22	4.1e-29	1	2
ENSORLP00000014523	RRM_1	PF00076.22	4.1e-29	2	2
ENSORLP00000027307	RRM_1	PF00076.22	5.2e-29	1	2
ENSORLP00000027307	RRM_1	PF00076.22	5.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031267	-	4833	-	ENSORLP00000027307	371 (aa)	-	-
ENSORLT00000014524	-	4833	XM_023966043	ENSORLP00000014523	344 (aa)	XP_023821811	H2M7R5

Gene Model

Click here to download ENSORLG00000011589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000011589	rbm4.3	100	93.353	ENSORLG00000012473	rbm4.3	100	93.353
ENSORLG00000011589	rbm4.3	96	54.070	ENSORLG00000024749	rbm4.3	96	52.450
ENSORLG00000011589	rbm4.3	86	44.828	ENSORLG00000012496	rbm4.1	57	52.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011589	rbm4.3	100	76.323	ENSAPOG00000002953	rbm4.3	100	77.159	Acanthochromis_polyacanthus
ENSORLG00000011589	rbm4.3	99	59.605	ENSAPOG00000002991	rbm4.3	99	60.169	Acanthochromis_polyacanthus
ENSORLG00000011589	rbm4.3	96	60.465	ENSACIG00000021295	rbm4.3	96	59.884	Amphilophus_citrinellus
ENSORLG00000011589	rbm4.3	100	77.143	ENSACIG00000021311	-	100	79.429	Amphilophus_citrinellus
ENSORLG00000011589	rbm4.3	100	75.487	ENSAOCG00000008015	rbm4.3	100	76.602	Amphiprion_ocellaris
ENSORLG00000011589	rbm4.3	97	58.140	ENSAOCG00000007992	rbm4.3	96	58.430	Amphiprion_ocellaris
ENSORLG00000011589	rbm4.3	97	58.140	ENSAPEG00000017288	rbm4.3	96	58.430	Amphiprion_percula
ENSORLG00000011589	rbm4.3	100	76.323	ENSAPEG00000017324	rbm4.3	100	76.045	Amphiprion_percula
ENSORLG00000011589	rbm4.3	100	74.373	ENSATEG00000019375	rbm4.3	100	76.880	Anabas_testudineus
ENSORLG00000011589	rbm4.3	99	62.000	ENSATEG00000019395	rbm4.3	99	61.891	Anabas_testudineus
ENSORLG00000011589	rbm4.3	97	60.000	ENSACLG00000010642	rbm4.3	96	58.721	Astatotilapia_calliptera
ENSORLG00000011589	rbm4.3	100	77.714	ENSACLG00000010620	-	100	80.000	Astatotilapia_calliptera
ENSORLG00000011589	rbm4.3	56	70.619	ENSAMXG00000040224	rbm4.3	77	70.103	Astyanax_mexicanus
ENSORLG00000011589	rbm4.3	100	72.981	ENSCSEG00000013659	rbm4.3	100	73.816	Cynoglossus_semilaevis
ENSORLG00000011589	rbm4.3	99	58.380	ENSCVAG00000008502	rbm4.3	97	58.430	Cyprinodon_variegatus
ENSORLG00000011589	rbm4.3	100	78.571	ENSCVAG00000008508	rbm4.3	100	79.429	Cyprinodon_variegatus
ENSORLG00000011589	rbm4.3	95	63.018	ENSDARG00000022129	rbm4.3	97	64.451	Danio_rerio
ENSORLG00000011589	rbm4.3	100	57.300	ENSELUG00000022168	rbm4.3	100	60.882	Esox_lucius
ENSORLG00000011589	rbm4.3	99	67.778	ENSELUG00000022155	rbm4.3	97	67.143	Esox_lucius
ENSORLG00000011589	rbm4.3	99	67.500	ENSELUG00000022150	rbm4.3	97	65.429	Esox_lucius
ENSORLG00000011589	rbm4.3	97	56.980	ENSFHEG00000023096	rbm4.3	97	56.125	Fundulus_heteroclitus
ENSORLG00000011589	rbm4.3	82	77.544	ENSFHEG00000023137	rbm4.3	86	79.715	Fundulus_heteroclitus
ENSORLG00000011589	rbm4.3	100	56.825	ENSGAFG00000001935	rbm4.3	100	58.774	Gambusia_affinis
ENSORLG00000011589	rbm4.3	96	59.078	ENSGACG00000019980	rbm4.3	95	57.803	Gasterosteus_aculeatus
ENSORLG00000011589	rbm4.3	100	77.714	ENSHBUG00000009020	-	100	80.000	Haplochromis_burtoni
ENSORLG00000011589	rbm4.3	97	60.290	ENSHBUG00000009051	rbm4.3	96	59.012	Haplochromis_burtoni
ENSORLG00000011589	rbm4.3	95	68.843	ENSHCOG00000010349	rbm4.3	100	70.225	Hippocampus_comes
ENSORLG00000011589	rbm4.3	100	61.050	ENSIPUG00000022943	RBM4B	100	60.497	Ictalurus_punctatus
ENSORLG00000011589	rbm4.3	100	74.640	ENSKMAG00000017468	rbm4.3	100	74.063	Kryptolebias_marmoratus
ENSORLG00000011589	rbm4.3	100	72.500	ENSLBEG00000001071	-	100	74.722	Labrus_bergylta
ENSORLG00000011589	rbm4.3	54	66.845	ENSLBEG00000001025	rbm4.3	81	65.746	Labrus_bergylta
ENSORLG00000011589	rbm4.3	95	56.438	ENSLOCG00000002755	rbm4.3	100	56.545	Lepisosteus_oculatus
ENSORLG00000011589	rbm4.3	100	74.930	ENSMAMG00000004715	-	84	77.437	Mastacembelus_armatus
ENSORLG00000011589	rbm4.3	99	61.582	ENSMAMG00000004701	rbm4.3	99	60.452	Mastacembelus_armatus
ENSORLG00000011589	rbm4.3	97	60.000	ENSMZEG00005028540	rbm4.3	96	58.721	Maylandia_zebra
ENSORLG00000011589	rbm4.3	88	62.295	ENSMZEG00005007441	rbm4.3	79	60.855	Maylandia_zebra
ENSORLG00000011589	rbm4.3	100	74.286	ENSMZEG00005007417	-	100	76.571	Maylandia_zebra
ENSORLG00000011589	rbm4.3	87	72.131	ENSMZEG00005028537	-	85	71.795	Maylandia_zebra
ENSORLG00000011589	rbm4.3	97	62.139	ENSMMOG00000012191	rbm4.3	96	58.430	Mola_mola
ENSORLG00000011589	rbm4.3	50	80.117	ENSMMOG00000012143	rbm4.3	98	80.117	Mola_mola
ENSORLG00000011589	rbm4.3	99	59.040	ENSMALG00000015014	-	89	59.875	Monopterus_albus
ENSORLG00000011589	rbm4.3	87	75.163	ENSMALG00000003001	rbm4.3	87	78.105	Monopterus_albus
ENSORLG00000011589	rbm4.3	97	58.754	ENSMALG00000003032	rbm4.3	93	59.683	Monopterus_albus
ENSORLG00000011589	rbm4.3	97	59.710	ENSNBRG00000012372	rbm4.3	96	58.140	Neolamprologus_brichardi
ENSORLG00000011589	rbm4.3	97	59.026	ENSONIG00000018378	rbm4.3	96	57.681	Oreochromis_niloticus
ENSORLG00000011589	rbm4.3	100	77.714	ENSONIG00000018380	-	100	80.000	Oreochromis_niloticus
ENSORLG00000011589	rbm4.3	99	54.494	ENSORLG00020012482	rbm4.3	97	52.738	Oryzias_latipes_hni
ENSORLG00000011589	rbm4.3	100	99.419	ENSORLG00020012474	rbm4.3	100	99.419	Oryzias_latipes_hni
ENSORLG00000011589	rbm4.3	100	93.353	ENSORLG00020012464	rbm4.3	100	93.353	Oryzias_latipes_hni
ENSORLG00000011589	rbm4.3	100	93.353	ENSORLG00015013686	rbm4.3	100	93.353	Oryzias_latipes_hsok
ENSORLG00000011589	rbm4.3	100	99.128	ENSORLG00015013698	rbm4.3	100	99.128	Oryzias_latipes_hsok
ENSORLG00000011589	rbm4.3	97	53.757	ENSORLG00015013721	rbm4.3	96	52.754	Oryzias_latipes_hsok
ENSORLG00000011589	rbm4.3	100	94.783	ENSOMEG00000005929	rbm4.3	100	94.783	Oryzias_melastigma
ENSORLG00000011589	rbm4.3	100	84.703	ENSOMEG00000005918	rbm4.3	100	85.836	Oryzias_melastigma
ENSORLG00000011589	rbm4.3	92	66.975	ENSPKIG00000007001	rbm4.3	100	61.389	Paramormyrops_kingsleyae
ENSORLG00000011589	rbm4.3	100	74.373	ENSPLAG00000006131	rbm4.3	100	75.487	Poecilia_latipinna
ENSORLG00000011589	rbm4.3	97	58.689	ENSPLAG00000006077	rbm4.3	97	57.143	Poecilia_latipinna
ENSORLG00000011589	rbm4.3	100	78.286	ENSPMEG00000024263	rbm4.3	100	79.429	Poecilia_mexicana
ENSORLG00000011589	rbm4.3	97	58.857	ENSPMEG00000024260	rbm4.3	97	56.857	Poecilia_mexicana
ENSORLG00000011589	rbm4.3	100	74.095	ENSPMEG00000024271	rbm4.3	100	75.209	Poecilia_mexicana
ENSORLG00000011589	rbm4.3	100	69.832	ENSPREG00000002156	rbm4.3	100	70.670	Poecilia_reticulata
ENSORLG00000011589	rbm4.3	99	59.615	ENSPREG00000002093	-	97	57.714	Poecilia_reticulata
ENSORLG00000011589	rbm4.3	97	59.538	ENSPNYG00000018564	rbm4.3	96	58.480	Pundamilia_nyererei
ENSORLG00000011589	rbm4.3	100	77.714	ENSPNYG00000018541	rbm4.3	100	80.000	Pundamilia_nyererei
ENSORLG00000011589	rbm4.3	100	61.789	ENSPNAG00000013053	rbm4.3	100	61.789	Pygocentrus_nattereri
ENSORLG00000011589	rbm4.3	100	61.995	ENSSFOG00015015563	rbm4.3	100	59.299	Scleropages_formosus
ENSORLG00000011589	rbm4.3	100	75.487	ENSSMAG00000013644	rbm4.3	100	73.816	Scophthalmus_maximus
ENSORLG00000011589	rbm4.3	96	58.017	ENSSMAG00000013653	rbm4.3	96	55.848	Scophthalmus_maximus
ENSORLG00000011589	rbm4.3	100	74.373	ENSSDUG00000018435	rbm4.3	100	76.880	Seriola_dumerili
ENSORLG00000011589	rbm4.3	97	60.116	ENSSDUG00000018422	rbm4.3	96	59.130	Seriola_dumerili
ENSORLG00000011589	rbm4.3	100	74.373	ENSSLDG00000017204	rbm4.3	100	76.880	Seriola_lalandi_dorsalis
ENSORLG00000011589	rbm4.3	96	60.000	ENSSLDG00000017182	rbm4.3	96	59.012	Seriola_lalandi_dorsalis
ENSORLG00000011589	rbm4.3	100	76.045	ENSSPAG00000008062	rbm4.3	100	76.880	Stegastes_partitus
ENSORLG00000011589	rbm4.3	99	57.703	ENSSPAG00000008041	rbm4.3	90	56.649	Stegastes_partitus
ENSORLG00000011589	rbm4.3	100	75.978	ENSTRUG00000020901	rbm4.3	100	76.816	Takifugu_rubripes
ENSORLG00000011589	rbm4.3	98	59.544	ENSTRUG00000023874	rbm4.3	98	60.571	Takifugu_rubripes
ENSORLG00000011589	rbm4.3	100	73.464	ENSTNIG00000005668	rbm4.3	100	74.302	Tetraodon_nigroviridis
ENSORLG00000011589	rbm4.3	100	78.571	ENSXCOG00000006001	rbm4.3	100	79.714	Xiphophorus_couchianus
ENSORLG00000011589	rbm4.3	100	57.778	ENSXCOG00000005996	rbm4.3	100	58.333	Xiphophorus_couchianus
ENSORLG00000011589	rbm4.3	100	74.652	ENSXMAG00000011698	rbm4.3	100	75.766	Xiphophorus_maculatus
ENSORLG00000011589	rbm4.3	100	78.571	ENSXMAG00000021997	rbm4.3	100	79.714	Xiphophorus_maculatus
ENSORLG00000011589	rbm4.3	97	58.382	ENSXMAG00000025173	rbm4.3	97	58.000	Xiphophorus_maculatus