EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000011628 (Gene tree)
Gene ID: 101164198
Gene Symbol: cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6410 bases
Position: chr24:5329266-5335675
Accession: 101164198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000014579	Beta-Casp	PF10996.8	1.7e-21	1	1
ENSORLP00000014579	RMMBL	PF07521.12	6.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000014580	-	2226	XM_004083424	ENSORLP00000014579	741 (aa)	XP_004083472	H2M7W9

Gene Model

Click here to download ENSORLG00000011628's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011628	cpsf2	100	80.101	ENSG00000165934	CPSF2	100	80.101	Homo_sapiens
ENSORLG00000011628	cpsf2	100	88.564	ENSAPOG00000001242	cpsf2	100	88.564	Acanthochromis_polyacanthus
ENSORLG00000011628	cpsf2	100	88.452	ENSACIG00000009331	cpsf2	100	88.452	Amphilophus_citrinellus
ENSORLG00000011628	cpsf2	100	88.818	ENSAOCG00000014095	cpsf2	100	88.818	Amphiprion_ocellaris
ENSORLG00000011628	cpsf2	100	88.818	ENSAPEG00000009158	cpsf2	100	88.818	Amphiprion_percula
ENSORLG00000011628	cpsf2	96	87.599	ENSATEG00000017644	cpsf2	99	92.617	Anabas_testudineus
ENSORLG00000011628	cpsf2	100	79.620	ENSAPLG00000006330	CPSF2	100	79.620	Anas_platyrhynchos
ENSORLG00000011628	cpsf2	100	79.341	ENSACAG00000009245	CPSF2	100	79.341	Anolis_carolinensis
ENSORLG00000011628	cpsf2	100	80.228	ENSANAG00000022915	CPSF2	100	80.228	Aotus_nancymaae
ENSORLG00000011628	cpsf2	100	83.523	ENSAMXG00000018696	cpsf2	99	87.145	Astyanax_mexicanus
ENSORLG00000011628	cpsf2	100	80.101	ENSBTAG00000010227	CPSF2	100	80.101	Bos_taurus
ENSORLG00000011628	cpsf2	100	39.742	WBGene00017313	cpsf-2	100	39.390	Caenorhabditis_elegans
ENSORLG00000011628	cpsf2	100	80.228	ENSCJAG00000018069	CPSF2	100	80.228	Callithrix_jacchus
ENSORLG00000011628	cpsf2	100	79.975	ENSCAFG00000010909	CPSF2	100	79.975	Canis_familiaris
ENSORLG00000011628	cpsf2	100	81.427	ENSCAFG00020020670	CPSF2	100	81.427	Canis_lupus_dingo
ENSORLG00000011628	cpsf2	100	80.101	ENSCHIG00000023848	CPSF2	100	80.101	Capra_hircus
ENSORLG00000011628	cpsf2	100	80.101	ENSTSYG00000009036	CPSF2	100	80.101	Carlito_syrichta
ENSORLG00000011628	cpsf2	100	80.101	ENSCPOG00000010899	CPSF2	100	80.101	Cavia_porcellus
ENSORLG00000011628	cpsf2	100	80.228	ENSCCAG00000028088	CPSF2	100	80.228	Cebus_capucinus
ENSORLG00000011628	cpsf2	100	80.101	ENSCATG00000030132	CPSF2	100	80.101	Cercocebus_atys
ENSORLG00000011628	cpsf2	100	80.101	ENSCLAG00000012404	CPSF2	100	80.101	Chinchilla_lanigera
ENSORLG00000011628	cpsf2	100	80.101	ENSCSAG00000011300	CPSF2	100	80.101	Chlorocebus_sabaeus
ENSORLG00000011628	cpsf2	100	74.778	ENSCHOG00000012904	CPSF2	100	74.778	Choloepus_hoffmanni
ENSORLG00000011628	cpsf2	100	79.848	ENSCPBG00000008766	CPSF2	97	79.848	Chrysemys_picta_bellii
ENSORLG00000011628	cpsf2	100	49.689	ENSCING00000007881	-	100	48.272	Ciona_intestinalis
ENSORLG00000011628	cpsf2	96	82.657	ENSCANG00000041651	CPSF2	96	82.657	Colobus_angolensis_palliatus
ENSORLG00000011628	cpsf2	100	79.721	ENSCGRG00001006901	Cpsf2	100	79.721	Cricetulus_griseus_chok1gshd
ENSORLG00000011628	cpsf2	100	79.721	ENSCGRG00000012416	Cpsf2	100	79.721	Cricetulus_griseus_crigri
ENSORLG00000011628	cpsf2	100	88.071	ENSCSEG00000004116	cpsf2	100	88.071	Cynoglossus_semilaevis
ENSORLG00000011628	cpsf2	100	88.310	ENSCVAG00000000095	cpsf2	100	88.310	Cyprinodon_variegatus
ENSORLG00000011628	cpsf2	100	82.152	ENSDARG00000028971	cpsf2	99	85.237	Danio_rerio
ENSORLG00000011628	cpsf2	100	80.101	ENSDNOG00000042757	CPSF2	100	80.101	Dasypus_novemcinctus
ENSORLG00000011628	cpsf2	100	80.228	ENSDORG00000013709	Cpsf2	100	80.228	Dipodomys_ordii
ENSORLG00000011628	cpsf2	100	49.197	FBgn0027873	Cpsf100	100	49.071	Drosophila_melanogaster
ENSORLG00000011628	cpsf2	100	72.785	ENSETEG00000012123	CPSF2	100	72.785	Echinops_telfairi
ENSORLG00000011628	cpsf2	55	77.262	ENSEBUG00000012098	cpsf2	93	77.262	Eptatretus_burgeri
ENSORLG00000011628	cpsf2	88	80.098	ENSEASG00005021193	CPSF2	100	80.098	Equus_asinus_asinus
ENSORLG00000011628	cpsf2	100	79.975	ENSECAG00000023935	CPSF2	100	79.975	Equus_caballus
ENSORLG00000011628	cpsf2	100	82.412	ENSELUG00000008442	cpsf2	100	82.412	Esox_lucius
ENSORLG00000011628	cpsf2	100	80.101	ENSFCAG00000007886	CPSF2	100	80.101	Felis_catus
ENSORLG00000011628	cpsf2	100	79.695	ENSFALG00000002412	CPSF2	100	79.695	Ficedula_albicollis
ENSORLG00000011628	cpsf2	100	79.975	ENSFDAG00000006327	CPSF2	100	79.975	Fukomys_damarensis
ENSORLG00000011628	cpsf2	96	86.518	ENSFHEG00000015465	cpsf2	98	87.304	Fundulus_heteroclitus
ENSORLG00000011628	cpsf2	100	83.818	ENSGMOG00000008761	cpsf2	100	83.818	Gadus_morhua
ENSORLG00000011628	cpsf2	100	80.076	ENSGALG00000010783	CPSF2	100	80.076	Gallus_gallus
ENSORLG00000011628	cpsf2	100	88.564	ENSGAFG00000001407	cpsf2	100	88.564	Gambusia_affinis
ENSORLG00000011628	cpsf2	100	88.056	ENSGACG00000008418	cpsf2	100	92.902	Gasterosteus_aculeatus
ENSORLG00000011628	cpsf2	100	79.721	ENSGAGG00000008287	CPSF2	100	79.721	Gopherus_agassizii
ENSORLG00000011628	cpsf2	100	80.101	ENSGGOG00000011799	CPSF2	100	80.101	Gorilla_gorilla
ENSORLG00000011628	cpsf2	100	86.277	ENSHBUG00000023466	cpsf2	100	86.277	Haplochromis_burtoni
ENSORLG00000011628	cpsf2	100	80.101	ENSHGLG00000018311	CPSF2	100	80.101	Heterocephalus_glaber_female
ENSORLG00000011628	cpsf2	100	80.101	ENSHGLG00100016460	CPSF2	100	80.101	Heterocephalus_glaber_male
ENSORLG00000011628	cpsf2	100	86.912	ENSHCOG00000019527	cpsf2	98	86.912	Hippocampus_comes
ENSORLG00000011628	cpsf2	100	84.411	ENSIPUG00000020857	cpsf2	100	84.411	Ictalurus_punctatus
ENSORLG00000011628	cpsf2	100	80.228	ENSSTOG00000009528	CPSF2	100	80.228	Ictidomys_tridecemlineatus
ENSORLG00000011628	cpsf2	100	79.975	ENSJJAG00000017925	Cpsf2	100	79.975	Jaculus_jaculus
ENSORLG00000011628	cpsf2	100	87.675	ENSKMAG00000019429	cpsf2	100	87.675	Kryptolebias_marmoratus
ENSORLG00000011628	cpsf2	100	91.363	ENSLBEG00000011585	cpsf2	100	91.363	Labrus_bergylta
ENSORLG00000011628	cpsf2	100	78.553	ENSLACG00000019024	CPSF2	100	78.861	Latimeria_chalumnae
ENSORLG00000011628	cpsf2	100	82.785	ENSLOCG00000014102	cpsf2	100	82.785	Lepisosteus_oculatus
ENSORLG00000011628	cpsf2	100	79.899	ENSLAFG00000004891	CPSF2	100	79.899	Loxodonta_africana
ENSORLG00000011628	cpsf2	100	80.101	ENSMFAG00000041212	CPSF2	100	80.101	Macaca_fascicularis
ENSORLG00000011628	cpsf2	100	80.101	ENSMMUG00000000699	CPSF2	100	80.101	Macaca_mulatta
ENSORLG00000011628	cpsf2	100	80.101	ENSMNEG00000031584	CPSF2	100	80.101	Macaca_nemestrina
ENSORLG00000011628	cpsf2	100	80.101	ENSMLEG00000029394	CPSF2	100	80.101	Mandrillus_leucophaeus
ENSORLG00000011628	cpsf2	100	88.691	ENSMAMG00000004235	cpsf2	100	88.691	Mastacembelus_armatus
ENSORLG00000011628	cpsf2	100	86.404	ENSMZEG00005001769	cpsf2	100	86.404	Maylandia_zebra
ENSORLG00000011628	cpsf2	100	79.848	ENSMGAG00000013122	CPSF2	100	79.848	Meleagris_gallopavo
ENSORLG00000011628	cpsf2	100	79.848	ENSMAUG00000015160	Cpsf2	100	79.848	Mesocricetus_auratus
ENSORLG00000011628	cpsf2	100	80.101	ENSMICG00000016441	CPSF2	100	80.101	Microcebus_murinus
ENSORLG00000011628	cpsf2	100	79.721	ENSMOCG00000015372	Cpsf2	100	79.721	Microtus_ochrogaster
ENSORLG00000011628	cpsf2	100	82.846	ENSMMOG00000015590	cpsf2	100	82.846	Mola_mola
ENSORLG00000011628	cpsf2	100	80.228	ENSMODG00000002042	CPSF2	100	80.228	Monodelphis_domestica
ENSORLG00000011628	cpsf2	100	84.752	ENSMALG00000022275	cpsf2	100	84.752	Monopterus_albus
ENSORLG00000011628	cpsf2	100	79.721	ENSMUSG00000041781	Cpsf2	100	79.721	Mus_musculus
ENSORLG00000011628	cpsf2	100	79.594	MGP_PahariEiJ_G0029791	Cpsf2	100	79.594	Mus_pahari
ENSORLG00000011628	cpsf2	100	79.721	MGP_SPRETEiJ_G0018877	Cpsf2	100	79.721	Mus_spretus
ENSORLG00000011628	cpsf2	100	80.101	ENSMPUG00000007617	CPSF2	98	80.101	Mustela_putorius_furo
ENSORLG00000011628	cpsf2	100	79.848	ENSMLUG00000005570	CPSF2	100	79.848	Myotis_lucifugus
ENSORLG00000011628	cpsf2	100	79.848	ENSNGAG00000020312	Cpsf2	100	79.848	Nannospalax_galili
ENSORLG00000011628	cpsf2	100	86.785	ENSNBRG00000022402	cpsf2	100	86.785	Neolamprologus_brichardi
ENSORLG00000011628	cpsf2	100	79.341	ENSNLEG00000017132	CPSF2	100	79.341	Nomascus_leucogenys
ENSORLG00000011628	cpsf2	90	80.259	ENSMEUG00000008138	CPSF2	91	80.259	Notamacropus_eugenii
ENSORLG00000011628	cpsf2	96	78.431	ENSOPRG00000008484	-	96	78.431	Ochotona_princeps
ENSORLG00000011628	cpsf2	100	79.848	ENSODEG00000008682	CPSF2	100	79.848	Octodon_degus
ENSORLG00000011628	cpsf2	100	86.912	ENSONIG00000005901	cpsf2	100	86.912	Oreochromis_niloticus
ENSORLG00000011628	cpsf2	100	80.330	ENSOANG00000003822	CPSF2	100	80.330	Ornithorhynchus_anatinus
ENSORLG00000011628	cpsf2	100	79.975	ENSOCUG00000005713	CPSF2	100	79.975	Oryctolagus_cuniculus
ENSORLG00000011628	cpsf2	100	94.155	ENSORLG00020016980	cpsf2	100	94.155	Oryzias_latipes_hni
ENSORLG00000011628	cpsf2	100	94.155	ENSORLG00015011910	cpsf2	100	94.155	Oryzias_latipes_hsok
ENSORLG00000011628	cpsf2	100	92.132	ENSOMEG00000022876	cpsf2	100	92.132	Oryzias_melastigma
ENSORLG00000011628	cpsf2	100	77.118	ENSOARG00000012889	CPSF2	100	77.118	Ovis_aries
ENSORLG00000011628	cpsf2	100	80.101	ENSPPAG00000039666	CPSF2	100	80.101	Pan_paniscus
ENSORLG00000011628	cpsf2	99	80.076	ENSPPRG00000010869	CPSF2	100	80.076	Panthera_pardus
ENSORLG00000011628	cpsf2	100	80.101	ENSPTIG00000021202	CPSF2	100	80.101	Panthera_tigris_altaica
ENSORLG00000011628	cpsf2	100	80.101	ENSPTRG00000006651	CPSF2	100	80.101	Pan_troglodytes
ENSORLG00000011628	cpsf2	100	80.101	ENSPANG00000017417	CPSF2	100	80.101	Papio_anubis
ENSORLG00000011628	cpsf2	100	89.367	ENSPKIG00000021453	cpsf2	100	89.367	Paramormyrops_kingsleyae
ENSORLG00000011628	cpsf2	100	79.341	ENSPSIG00000006289	CPSF2	100	79.341	Pelodiscus_sinensis
ENSORLG00000011628	cpsf2	80	87.667	ENSPMGG00000002511	cpsf2	99	87.667	Periophthalmus_magnuspinnatus
ENSORLG00000011628	cpsf2	100	79.848	ENSPEMG00000007917	Cpsf2	100	79.848	Peromyscus_maniculatus_bairdii
ENSORLG00000011628	cpsf2	100	68.005	ENSPMAG00000006205	cpsf2	100	68.414	Petromyzon_marinus
ENSORLG00000011628	cpsf2	100	80.228	ENSPCIG00000011393	CPSF2	100	80.228	Phascolarctos_cinereus
ENSORLG00000011628	cpsf2	100	88.818	ENSPFOG00000018648	cpsf2	100	88.818	Poecilia_formosa
ENSORLG00000011628	cpsf2	100	88.818	ENSPLAG00000019199	cpsf2	99	88.818	Poecilia_latipinna
ENSORLG00000011628	cpsf2	95	93.172	ENSPMEG00000012100	cpsf2	99	88.522	Poecilia_mexicana
ENSORLG00000011628	cpsf2	100	88.564	ENSPREG00000008960	cpsf2	100	88.564	Poecilia_reticulata
ENSORLG00000011628	cpsf2	68	80.716	ENSPPYG00000029685	-	100	80.716	Pongo_abelii
ENSORLG00000011628	cpsf2	100	80.101	ENSPCAG00000012477	CPSF2	100	80.101	Procavia_capensis
ENSORLG00000011628	cpsf2	100	80.101	ENSPCOG00000026387	CPSF2	100	80.101	Propithecus_coquereli
ENSORLG00000011628	cpsf2	62	85.654	ENSPVAG00000004223	CPSF2	65	85.654	Pteropus_vampyrus
ENSORLG00000011628	cpsf2	100	86.168	ENSPNYG00000023356	cpsf2	100	86.168	Pundamilia_nyererei
ENSORLG00000011628	cpsf2	100	84.664	ENSPNAG00000001849	cpsf2	100	84.664	Pygocentrus_nattereri
ENSORLG00000011628	cpsf2	100	79.721	ENSRNOG00000005733	Cpsf2	100	79.721	Rattus_norvegicus
ENSORLG00000011628	cpsf2	100	80.101	ENSRBIG00000044792	CPSF2	100	80.101	Rhinopithecus_bieti
ENSORLG00000011628	cpsf2	100	80.101	ENSRROG00000034875	CPSF2	100	80.101	Rhinopithecus_roxellana
ENSORLG00000011628	cpsf2	100	80.228	ENSSBOG00000024571	CPSF2	100	80.228	Saimiri_boliviensis_boliviensis
ENSORLG00000011628	cpsf2	100	80.228	ENSSHAG00000010458	CPSF2	100	80.228	Sarcophilus_harrisii
ENSORLG00000011628	cpsf2	100	84.537	ENSSFOG00015002117	cpsf2	100	84.411	Scleropages_formosus
ENSORLG00000011628	cpsf2	100	86.802	ENSSMAG00000002001	cpsf2	100	87.183	Scophthalmus_maximus
ENSORLG00000011628	cpsf2	100	88.691	ENSSDUG00000004084	cpsf2	100	88.691	Seriola_dumerili
ENSORLG00000011628	cpsf2	100	88.183	ENSSLDG00000024330	cpsf2	100	88.183	Seriola_lalandi_dorsalis
ENSORLG00000011628	cpsf2	57	93.069	ENSSARG00000009784	-	58	93.069	Sorex_araneus
ENSORLG00000011628	cpsf2	100	79.468	ENSSPUG00000013485	CPSF2	100	79.468	Sphenodon_punctatus
ENSORLG00000011628	cpsf2	100	89.072	ENSSPAG00000013284	cpsf2	100	89.072	Stegastes_partitus
ENSORLG00000011628	cpsf2	100	79.975	ENSSSCG00000002447	CPSF2	100	79.975	Sus_scrofa
ENSORLG00000011628	cpsf2	100	79.822	ENSTGUG00000012571	-	100	79.822	Taeniopygia_guttata
ENSORLG00000011628	cpsf2	100	90.823	ENSTRUG00000003742	cpsf2	100	90.823	Takifugu_rubripes
ENSORLG00000011628	cpsf2	100	87.072	ENSTNIG00000012228	cpsf2	100	87.199	Tetraodon_nigroviridis
ENSORLG00000011628	cpsf2	91	77.213	ENSTBEG00000004530	CPSF2	94	77.213	Tupaia_belangeri
ENSORLG00000011628	cpsf2	94	93.333	ENSTTRG00000008697	CPSF2	88	93.333	Tursiops_truncatus
ENSORLG00000011628	cpsf2	100	80.101	ENSUAMG00000028071	CPSF2	100	80.101	Ursus_americanus
ENSORLG00000011628	cpsf2	100	80.101	ENSUMAG00000005029	CPSF2	100	80.101	Ursus_maritimus
ENSORLG00000011628	cpsf2	99	79.949	ENSVPAG00000003503	CPSF2	100	79.949	Vicugna_pacos
ENSORLG00000011628	cpsf2	100	79.975	ENSVVUG00000024642	CPSF2	100	79.975	Vulpes_vulpes
ENSORLG00000011628	cpsf2	100	78.961	ENSXETG00000010289	cpsf2	100	78.961	Xenopus_tropicalis
ENSORLG00000011628	cpsf2	100	88.310	ENSXCOG00000001764	cpsf2	100	88.310	Xiphophorus_couchianus
ENSORLG00000011628	cpsf2	100	88.818	ENSXMAG00000017048	cpsf2	100	88.818	Xiphophorus_maculatus