EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000011853 (Gene tree)
Gene ID: 101157648
Gene Symbol: sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 15738 bases
Position: chr18:29176634-29192371
Accession: 101157648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043406	KH_1	PF00013.29	3.3e-06	1	1
ENSORLP00000014848	KH_1	PF00013.29	3.6e-06	1	1
ENSORLP00000014848	zf-CCHC	PF00098.23	0.00054	1	1
ENSORLP00000043406	zf-CCHC	PF00098.23	0.00055	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000033517	-	5492	XM_023966017	ENSORLP00000043406	674 (aa)	XP_023821785	UPI0009DAA668
ENSORLT00000014849	-	4929	-	ENSORLP00000014848	675 (aa)	-	H2M8M8

Gene Model

Click here to download ENSORLG00000011853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011853	sf1	69	86.345	ENSAPOG00000012341	sf1	69	87.234	Acanthochromis_polyacanthus
ENSORLG00000011853	sf1	58	76.739	ENSAMEG00000017828	SF1	59	80.563	Ailuropoda_melanoleuca
ENSORLG00000011853	sf1	69	86.555	ENSAOCG00000010934	sf1	69	87.447	Amphiprion_ocellaris
ENSORLG00000011853	sf1	69	86.555	ENSAPEG00000009498	sf1	69	87.447	Amphiprion_percula
ENSORLG00000011853	sf1	66	87.692	ENSATEG00000001894	sf1	69	86.596	Anabas_testudineus
ENSORLG00000011853	sf1	59	77.163	ENSANAG00000026664	-	90	80.307	Aotus_nancymaae
ENSORLG00000011853	sf1	85	64.145	ENSANAG00000022607	-	89	72.222	Aotus_nancymaae
ENSORLG00000011853	sf1	66	84.922	ENSACLG00000007633	sf1	71	85.991	Astatotilapia_calliptera
ENSORLG00000011853	sf1	67	84.106	ENSAMXG00000003630	sf1	61	83.262	Astyanax_mexicanus
ENSORLG00000011853	sf1	58	76.499	ENSBTAG00000001035	SF1	63	80.563	Bos_taurus
ENSORLG00000011853	sf1	58	76.739	ENSCJAG00000002780	SF1	77	67.932	Callithrix_jacchus
ENSORLG00000011853	sf1	58	76.499	ENSCAFG00000014239	SF1	60	80.307	Canis_familiaris
ENSORLG00000011853	sf1	58	76.499	ENSCAFG00020014381	SF1	60	80.563	Canis_lupus_dingo
ENSORLG00000011853	sf1	58	76.739	ENSCHIG00000025867	SF1	70	80.563	Capra_hircus
ENSORLG00000011853	sf1	59	71.535	ENSTSYG00000033618	SF1	81	93.455	Carlito_syrichta
ENSORLG00000011853	sf1	58	76.998	ENSCAPG00000010762	SF1	68	80.879	Cavia_aperea
ENSORLG00000011853	sf1	58	76.998	ENSCPOG00000012290	SF1	70	80.620	Cavia_porcellus
ENSORLG00000011853	sf1	57	71.033	ENSCCAG00000023781	-	85	70.077	Cebus_capucinus
ENSORLG00000011853	sf1	58	77.805	ENSCCAG00000037881	SF1	90	80.307	Cebus_capucinus
ENSORLG00000011853	sf1	58	76.739	ENSCATG00000011564	SF1	89	81.102	Cercocebus_atys
ENSORLG00000011853	sf1	58	76.739	ENSCSAG00000007258	SF1	70	80.563	Chlorocebus_sabaeus
ENSORLG00000011853	sf1	56	71.357	ENSCHOG00000006008	SF1	68	74.731	Choloepus_hoffmanni
ENSORLG00000011853	sf1	62	79.206	ENSCPBG00000023763	SF1	50	82.474	Chrysemys_picta_bellii
ENSORLG00000011853	sf1	59	57.554	ENSCING00000005564	-	95	55.417	Ciona_intestinalis
ENSORLG00000011853	sf1	65	56.209	ENSCSAVG00000009055	-	65	61.381	Ciona_savignyi
ENSORLG00000011853	sf1	58	76.499	ENSCANG00000042201	SF1	89	81.102	Colobus_angolensis_palliatus
ENSORLG00000011853	sf1	58	77.724	ENSCGRG00001003677	Sf1	67	81.074	Cricetulus_griseus_chok1gshd
ENSORLG00000011853	sf1	58	77.724	ENSCGRG00000001708	Sf1	70	81.395	Cricetulus_griseus_crigri
ENSORLG00000011853	sf1	70	87.448	ENSCSEG00000014375	sf1	67	88.197	Cynoglossus_semilaevis
ENSORLG00000011853	sf1	66	89.648	ENSCVAG00000001670	sf1	69	88.060	Cyprinodon_variegatus
ENSORLG00000011853	sf1	68	80.258	ENSDARG00000008188	sf1	67	90.000	Danio_rerio
ENSORLG00000011853	sf1	58	77.458	ENSDNOG00000001282	SF1	70	80.307	Dasypus_novemcinctus
ENSORLG00000011853	sf1	59	76.794	ENSDORG00000016334	Sf1	60	80.612	Dipodomys_ordii
ENSORLG00000011853	sf1	58	70.803	ENSETEG00000012830	SF1	53	74.536	Echinops_telfairi
ENSORLG00000011853	sf1	58	76.739	ENSEASG00005018272	SF1	70	80.563	Equus_asinus_asinus
ENSORLG00000011853	sf1	58	76.978	ENSECAG00000024544	SF1	70	80.818	Equus_caballus
ENSORLG00000011853	sf1	52	77.480	ENSEEUG00000001058	SF1	86	80.692	Erinaceus_europaeus
ENSORLG00000011853	sf1	69	80.855	ENSELUG00000013225	sf1	61	84.764	Esox_lucius
ENSORLG00000011853	sf1	58	76.739	ENSFCAG00000012231	SF1	77	68.000	Felis_catus
ENSORLG00000011853	sf1	58	76.998	ENSFDAG00000009833	SF1	68	80.879	Fukomys_damarensis
ENSORLG00000011853	sf1	66	89.625	ENSFHEG00000022656	sf1	97	87.368	Fundulus_heteroclitus
ENSORLG00000011853	sf1	62	82.857	ENSGMOG00000007469	sf1	61	93.393	Gadus_morhua
ENSORLG00000011853	sf1	69	87.315	ENSGAFG00000019284	sf1	96	81.092	Gambusia_affinis
ENSORLG00000011853	sf1	55	91.711	ENSGACG00000000826	sf1	66	91.821	Gasterosteus_aculeatus
ENSORLG00000011853	sf1	62	78.972	ENSGAGG00000021691	SF1	69	70.825	Gopherus_agassizii
ENSORLG00000011853	sf1	66	88.326	ENSHBUG00000011598	sf1	69	87.983	Haplochromis_burtoni
ENSORLG00000011853	sf1	58	76.739	ENSHGLG00000009541	SF1	67	80.563	Heterocephalus_glaber_female
ENSORLG00000011853	sf1	58	76.998	ENSHGLG00100013879	-	68	80.879	Heterocephalus_glaber_male
ENSORLG00000011853	sf1	55	74.271	ENSHGLG00100008076	-	71	77.054	Heterocephalus_glaber_male
ENSORLG00000011853	sf1	55	69.287	ENSHGLG00100008255	-	73	75.824	Heterocephalus_glaber_male
ENSORLG00000011853	sf1	68	85.043	ENSHCOG00000011388	sf1	69	85.043	Hippocampus_comes
ENSORLG00000011853	sf1	64	67.568	ENSSTOG00000024353	-	70	70.707	Ictidomys_tridecemlineatus
ENSORLG00000011853	sf1	58	76.998	ENSSTOG00000009790	-	60	80.879	Ictidomys_tridecemlineatus
ENSORLG00000011853	sf1	58	76.978	ENSJJAG00000011788	Sf1	60	80.818	Jaculus_jaculus
ENSORLG00000011853	sf1	67	87.555	ENSKMAG00000005854	sf1	72	87.339	Kryptolebias_marmoratus
ENSORLG00000011853	sf1	67	87.879	ENSLBEG00000019836	sf1	74	86.947	Labrus_bergylta
ENSORLG00000011853	sf1	60	76.867	ENSLACG00000018493	SF1	71	78.974	Latimeria_chalumnae
ENSORLG00000011853	sf1	66	77.755	ENSLOCG00000002130	sf1	75	79.022	Lepisosteus_oculatus
ENSORLG00000011853	sf1	58	78.208	ENSLAFG00000007201	SF1	65	81.654	Loxodonta_africana
ENSORLG00000011853	sf1	58	76.499	ENSMFAG00000033122	SF1	89	81.102	Macaca_fascicularis
ENSORLG00000011853	sf1	57	77.916	ENSMMUG00000022606	SF1	93	80.307	Macaca_mulatta
ENSORLG00000011853	sf1	58	76.739	ENSMNEG00000037901	SF1	89	81.102	Macaca_nemestrina
ENSORLG00000011853	sf1	61	74.253	ENSMLEG00000040706	SF1	89	81.432	Mandrillus_leucophaeus
ENSORLG00000011853	sf1	66	89.693	ENSMAMG00000001780	sf1	70	88.136	Mastacembelus_armatus
ENSORLG00000011853	sf1	66	88.326	ENSMZEG00005009196	sf1	69	87.983	Maylandia_zebra
ENSORLG00000011853	sf1	58	77.458	ENSMAUG00000014064	Sf1	67	81.074	Mesocricetus_auratus
ENSORLG00000011853	sf1	58	76.739	ENSMICG00000001202	SF1	90	80.102	Microcebus_murinus
ENSORLG00000011853	sf1	58	76.978	ENSMOCG00000022038	Sf1	67	81.074	Microtus_ochrogaster
ENSORLG00000011853	sf1	66	84.989	ENSMMOG00000020474	sf1	69	83.582	Mola_mola
ENSORLG00000011853	sf1	59	77.033	ENSMODG00000029407	SF1	83	80.818	Monodelphis_domestica
ENSORLG00000011853	sf1	66	83.814	ENSMALG00000020521	sf1	75	82.441	Monopterus_albus
ENSORLG00000011853	sf1	58	77.458	MGP_CAROLIEiJ_G0022607	Sf1	99	94.737	Mus_caroli
ENSORLG00000011853	sf1	58	77.458	ENSMUSG00000024949	Sf1	99	94.737	Mus_musculus
ENSORLG00000011853	sf1	58	77.458	MGP_PahariEiJ_G0014101	Sf1	99	94.737	Mus_pahari
ENSORLG00000011853	sf1	58	77.458	MGP_SPRETEiJ_G0023518	Sf1	99	94.737	Mus_spretus
ENSORLG00000011853	sf1	58	76.739	ENSMPUG00000012684	SF1	60	80.563	Mustela_putorius_furo
ENSORLG00000011853	sf1	58	77.458	ENSMLUG00000015217	-	60	80.563	Myotis_lucifugus
ENSORLG00000011853	sf1	62	74.091	ENSMLUG00000029800	-	66	77.238	Myotis_lucifugus
ENSORLG00000011853	sf1	58	76.978	ENSNGAG00000005550	Sf1	67	80.818	Nannospalax_galili
ENSORLG00000011853	sf1	66	86.947	ENSNBRG00000017606	sf1	70	85.991	Neolamprologus_brichardi
ENSORLG00000011853	sf1	58	76.978	ENSNLEG00000005236	-	89	81.102	Nomascus_leucogenys
ENSORLG00000011853	sf1	58	77.073	ENSMEUG00000013424	SF1	71	80.729	Notamacropus_eugenii
ENSORLG00000011853	sf1	52	76.676	ENSOPRG00000005008	SF1	68	80.980	Ochotona_princeps
ENSORLG00000011853	sf1	58	74.341	ENSODEG00000006102	-	61	78.005	Octodon_degus
ENSORLG00000011853	sf1	66	88.106	ENSONIG00000015728	sf1	69	87.768	Oreochromis_niloticus
ENSORLG00000011853	sf1	58	76.499	ENSOCUG00000026486	SF1	61	80.307	Oryctolagus_cuniculus
ENSORLG00000011853	sf1	100	99.703	ENSORLG00020011834	sf1	100	99.703	Oryzias_latipes_hni
ENSORLG00000011853	sf1	100	98.671	ENSORLG00015012855	sf1	100	98.671	Oryzias_latipes_hsok
ENSORLG00000011853	sf1	67	94.690	ENSOMEG00000005210	sf1	69	94.565	Oryzias_melastigma
ENSORLG00000011853	sf1	58	76.499	ENSOGAG00000016196	SF1	60	80.307	Otolemur_garnettii
ENSORLG00000011853	sf1	58	76.739	ENSOARG00000009166	SF1	67	80.307	Ovis_aries
ENSORLG00000011853	sf1	58	78.072	ENSPPAG00000002799	-	91	81.102	Pan_paniscus
ENSORLG00000011853	sf1	58	76.755	ENSPPRG00000013566	SF1	60	81.551	Panthera_pardus
ENSORLG00000011853	sf1	58	76.739	ENSPTIG00000016141	SF1	70	78.750	Panthera_tigris_altaica
ENSORLG00000011853	sf1	60	76.941	ENSPTRG00000003846	SF1	89	81.102	Pan_troglodytes
ENSORLG00000011853	sf1	58	76.739	ENSPANG00000020754	SF1	89	81.102	Papio_anubis
ENSORLG00000011853	sf1	59	77.273	ENSPEMG00000010463	Sf1	67	81.074	Peromyscus_maniculatus_bairdii
ENSORLG00000011853	sf1	58	76.978	ENSPCIG00000018173	SF1	62	80.563	Phascolarctos_cinereus
ENSORLG00000011853	sf1	66	89.648	ENSPFOG00000013683	sf1	69	88.060	Poecilia_formosa
ENSORLG00000011853	sf1	91	82.297	ENSPLAG00000018076	sf1	64	87.850	Poecilia_latipinna
ENSORLG00000011853	sf1	66	89.648	ENSPMEG00000005726	sf1	69	88.060	Poecilia_mexicana
ENSORLG00000011853	sf1	66	89.427	ENSPREG00000004155	sf1	69	87.846	Poecilia_reticulata
ENSORLG00000011853	sf1	58	76.739	ENSPPYG00000003098	-	72	80.307	Pongo_abelii
ENSORLG00000011853	sf1	58	76.499	ENSPCAG00000013631	SF1	77	67.429	Procavia_capensis
ENSORLG00000011853	sf1	73	69.460	ENSPCOG00000027546	SF1	90	80.102	Propithecus_coquereli
ENSORLG00000011853	sf1	58	77.458	ENSPVAG00000016938	SF1	77	68.654	Pteropus_vampyrus
ENSORLG00000011853	sf1	66	88.767	ENSPNYG00000004673	sf1	69	87.768	Pundamilia_nyererei
ENSORLG00000011853	sf1	66	83.480	ENSPNAG00000013072	sf1	69	82.013	Pygocentrus_nattereri
ENSORLG00000011853	sf1	58	77.458	ENSRNOG00000021085	Sf1	63	80.186	Rattus_norvegicus
ENSORLG00000011853	sf1	58	76.998	ENSRBIG00000042818	SF1	89	81.102	Rhinopithecus_bieti
ENSORLG00000011853	sf1	59	76.555	ENSRROG00000045655	SF1	89	81.432	Rhinopithecus_roxellana
ENSORLG00000011853	sf1	81	64.138	ENSSBOG00000022267	-	88	70.914	Saimiri_boliviensis_boliviensis
ENSORLG00000011853	sf1	59	78.624	ENSSHAG00000006841	SF1	72	81.425	Sarcophilus_harrisii
ENSORLG00000011853	sf1	69	79.210	ENSSFOG00015021978	sf1	68	79.493	Scleropages_formosus
ENSORLG00000011853	sf1	84	81.419	ENSSMAG00000007549	sf1	72	86.809	Scophthalmus_maximus
ENSORLG00000011853	sf1	66	89.059	ENSSDUG00000003903	sf1	72	88.161	Seriola_dumerili
ENSORLG00000011853	sf1	66	89.059	ENSSLDG00000013075	sf1	70	88.161	Seriola_lalandi_dorsalis
ENSORLG00000011853	sf1	58	72.397	ENSSARG00000008180	SF1	73	76.227	Sorex_araneus
ENSORLG00000011853	sf1	58	77.855	ENSSPUG00000012907	SF1	63	81.984	Sphenodon_punctatus
ENSORLG00000011853	sf1	69	87.815	ENSSPAG00000019060	sf1	69	88.511	Stegastes_partitus
ENSORLG00000011853	sf1	58	77.458	ENSSSCG00000013021	SF1	70	80.563	Sus_scrofa
ENSORLG00000011853	sf1	73	71.756	ENSTNIG00000004820	sf1	74	75.561	Tetraodon_nigroviridis
ENSORLG00000011853	sf1	58	72.772	ENSTBEG00000013133	SF1	55	75.131	Tupaia_belangeri
ENSORLG00000011853	sf1	58	72.881	ENSTTRG00000008857	SF1	70	75.969	Tursiops_truncatus
ENSORLG00000011853	sf1	58	78.049	ENSUMAG00000007268	SF1	73	80.563	Ursus_maritimus
ENSORLG00000011853	sf1	58	76.739	ENSVVUG00000028585	SF1	70	80.563	Vulpes_vulpes
ENSORLG00000011853	sf1	85	72.402	ENSXETG00000008434	sf1	65	82.768	Xenopus_tropicalis
ENSORLG00000011853	sf1	53	93.132	ENSXCOG00000003704	sf1	73	89.844	Xiphophorus_couchianus
ENSORLG00000011853	sf1	66	89.207	ENSXMAG00000007822	sf1	72	87.633	Xiphophorus_maculatus