EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000011874 (Gene tree)
Gene ID: 101165683
Gene Symbol: rbm25b
Alias: -
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 12136 bases
Position: chr24:5868471-5880606
Accession: 101165683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000014878	RRM_1	PF00076.22	3.7e-09	1	1
ENSORLP00000014878	PWI	PF01480.17	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000014879	-	6409	XM_004083430	ENSORLP00000014878	817 (aa)	XP_004083478	H2M8Q7

Gene Model

Click here to download ENSORLG00000011874's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011874's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011874	rbm25b	55	77.462	ENSAPOG00000017757	rbm25a	57	74.790	Acanthochromis_polyacanthus
ENSORLG00000011874	rbm25b	57	86.966	ENSAPOG00000015321	rbm25b	58	86.966	Acanthochromis_polyacanthus
ENSORLG00000011874	rbm25b	55	77.925	ENSACIG00000019482	rbm25a	57	75.630	Amphilophus_citrinellus
ENSORLG00000011874	rbm25b	57	84.402	ENSACIG00000014178	rbm25b	56	83.120	Amphilophus_citrinellus
ENSORLG00000011874	rbm25b	55	75.330	ENSAOCG00000013695	rbm25a	56	73.150	Amphiprion_ocellaris
ENSORLG00000011874	rbm25b	57	81.410	ENSAOCG00000019308	rbm25b	56	81.410	Amphiprion_ocellaris
ENSORLG00000011874	rbm25b	55	76.573	ENSAPEG00000007514	rbm25a	57	74.167	Amphiprion_percula
ENSORLG00000011874	rbm25b	59	83.542	ENSAPEG00000009666	rbm25b	60	85.684	Amphiprion_percula
ENSORLG00000011874	rbm25b	57	76.261	ENSATEG00000020676	rbm25a	63	76.550	Anabas_testudineus
ENSORLG00000011874	rbm25b	57	86.966	ENSATEG00000017312	rbm25b	57	86.966	Anabas_testudineus
ENSORLG00000011874	rbm25b	54	59.424	ENSANAG00000028295	RBM25	98	66.319	Aotus_nancymaae
ENSORLG00000011874	rbm25b	89	72.746	ENSACLG00000027482	rbm25a	90	71.984	Astatotilapia_calliptera
ENSORLG00000011874	rbm25b	57	88.462	ENSACLG00000024359	rbm25b	58	87.924	Astatotilapia_calliptera
ENSORLG00000011874	rbm25b	52	75.177	ENSAMXG00000024525	rbm25b	61	69.215	Astyanax_mexicanus
ENSORLG00000011874	rbm25b	54	63.858	ENSTSYG00000003024	RBM25	98	66.667	Carlito_syrichta
ENSORLG00000011874	rbm25b	50	77.222	ENSCAPG00000005239	RBM25	57	78.090	Cavia_aperea
ENSORLG00000011874	rbm25b	62	81.081	ENSCHOG00000008903	RBM25	62	81.429	Choloepus_hoffmanni
ENSORLG00000011874	rbm25b	60	63.125	ENSCGRG00001020817	Rbm25	99	62.912	Cricetulus_griseus_chok1gshd
ENSORLG00000011874	rbm25b	56	73.434	ENSCSEG00000009430	rbm25a	60	70.782	Cynoglossus_semilaevis
ENSORLG00000011874	rbm25b	99	80.617	ENSCSEG00000020737	rbm25b	58	84.335	Cynoglossus_semilaevis
ENSORLG00000011874	rbm25b	71	61.682	ENSCVAG00000005498	rbm25a	99	71.756	Cyprinodon_variegatus
ENSORLG00000011874	rbm25b	99	84.644	ENSCVAG00000003478	rbm25b	58	83.087	Cyprinodon_variegatus
ENSORLG00000011874	rbm25b	53	64.302	ENSDARG00000039266	rbm25a	98	94.872	Danio_rerio
ENSORLG00000011874	rbm25b	71	39.389	ENSEBUG00000002963	rbm25b	68	40.088	Eptatretus_burgeri
ENSORLG00000011874	rbm25b	85	69.585	ENSEEUG00000007350	RBM25	81	72.350	Erinaceus_europaeus
ENSORLG00000011874	rbm25b	56	64.224	ENSELUG00000021847	rbm25a	52	64.668	Esox_lucius
ENSORLG00000011874	rbm25b	58	70.935	ENSELUG00000007730	rbm25b	51	83.240	Esox_lucius
ENSORLG00000011874	rbm25b	57	86.383	ENSFHEG00000003513	rbm25b	59	86.229	Fundulus_heteroclitus
ENSORLG00000011874	rbm25b	56	68.103	ENSFHEG00000005318	rbm25a	61	66.540	Fundulus_heteroclitus
ENSORLG00000011874	rbm25b	87	71.861	ENSGMOG00000014070	rbm25a	87	69.631	Gadus_morhua
ENSORLG00000011874	rbm25b	86	79.018	ENSGMOG00000014097	rbm25b	52	79.018	Gadus_morhua
ENSORLG00000011874	rbm25b	99	70.482	ENSGAFG00000018036	rbm25a	54	69.276	Gambusia_affinis
ENSORLG00000011874	rbm25b	97	86.049	ENSGAFG00000001092	rbm25b	52	84.472	Gambusia_affinis
ENSORLG00000011874	rbm25b	55	77.533	ENSHBUG00000016908	rbm25a	58	75.158	Haplochromis_burtoni
ENSORLG00000011874	rbm25b	57	88.462	ENSHBUG00000018499	rbm25b	58	87.924	Haplochromis_burtoni
ENSORLG00000011874	rbm25b	99	77.710	ENSHCOG00000000142	rbm25b	57	78.384	Hippocampus_comes
ENSORLG00000011874	rbm25b	58	69.400	ENSKMAG00000016242	rbm25a	57	71.645	Kryptolebias_marmoratus
ENSORLG00000011874	rbm25b	56	87.965	ENSKMAG00000018826	rbm25b	58	86.864	Kryptolebias_marmoratus
ENSORLG00000011874	rbm25b	99	83.780	ENSLBEG00000010667	rbm25b	58	85.835	Labrus_bergylta
ENSORLG00000011874	rbm25b	60	67.594	ENSLACG00000011845	RBM25	54	71.639	Latimeria_chalumnae
ENSORLG00000011874	rbm25b	57	70.168	ENSLOCG00000014196	rbm25b	55	72.199	Lepisosteus_oculatus
ENSORLG00000011874	rbm25b	58	69.556	ENSMAMG00000000165	rbm25a	61	66.667	Mastacembelus_armatus
ENSORLG00000011874	rbm25b	58	87.261	ENSMAMG00000004524	rbm25b	57	88.009	Mastacembelus_armatus
ENSORLG00000011874	rbm25b	55	77.533	ENSMZEG00005011183	rbm25a	58	75.158	Maylandia_zebra
ENSORLG00000011874	rbm25b	57	88.462	ENSMZEG00005001453	rbm25b	58	87.924	Maylandia_zebra
ENSORLG00000011874	rbm25b	99	71.798	ENSMMOG00000015545	rbm25b	63	88.387	Mola_mola
ENSORLG00000011874	rbm25b	57	73.093	ENSMMOG00000009065	rbm25a	57	72.363	Mola_mola
ENSORLG00000011874	rbm25b	58	85.833	ENSMALG00000020441	rbm25b	90	86.864	Monopterus_albus
ENSORLG00000011874	rbm25b	55	77.753	ENSNBRG00000003761	rbm25a	58	75.158	Neolamprologus_brichardi
ENSORLG00000011874	rbm25b	57	80.769	ENSNBRG00000022192	rbm25b	57	78.602	Neolamprologus_brichardi
ENSORLG00000011874	rbm25b	54	59.202	ENSNLEG00000002701	RBM25	98	66.667	Nomascus_leucogenys
ENSORLG00000011874	rbm25b	100	99.021	ENSORLG00020016422	rbm25b	100	99.021	Oryzias_latipes_hni
ENSORLG00000011874	rbm25b	100	99.143	ENSORLG00015011269	rbm25b	100	99.143	Oryzias_latipes_hsok
ENSORLG00000011874	rbm25b	70	67.742	ENSORLG00015022499	rbm25a	54	64.767	Oryzias_latipes_hsok
ENSORLG00000011874	rbm25b	83	68.874	ENSOMEG00000022138	rbm25a	59	72.525	Oryzias_melastigma
ENSORLG00000011874	rbm25b	58	74.316	ENSPKIG00000003203	rbm25b	57	74.530	Paramormyrops_kingsleyae
ENSORLG00000011874	rbm25b	58	82.463	ENSPMGG00000015740	rbm25b	59	82.353	Periophthalmus_magnuspinnatus
ENSORLG00000011874	rbm25b	52	63.403	ENSPMGG00000001791	rbm25a	99	63.719	Periophthalmus_magnuspinnatus
ENSORLG00000011874	rbm25b	57	85.535	ENSPFOG00000018808	rbm25b	59	83.884	Poecilia_formosa
ENSORLG00000011874	rbm25b	55	69.170	ENSPFOG00000017931	rbm25a	60	67.946	Poecilia_formosa
ENSORLG00000011874	rbm25b	99	72.202	ENSPLAG00000018338	rbm25a	56	72.594	Poecilia_latipinna
ENSORLG00000011874	rbm25b	57	85.325	ENSPMEG00000019161	rbm25b	59	83.678	Poecilia_mexicana
ENSORLG00000011874	rbm25b	99	72.202	ENSPMEG00000024470	rbm25a	63	67.946	Poecilia_mexicana
ENSORLG00000011874	rbm25b	57	85.386	ENSPREG00000008522	rbm25b	59	83.745	Poecilia_reticulata
ENSORLG00000011874	rbm25b	55	75.385	ENSPREG00000009228	rbm25a	57	72.000	Poecilia_reticulata
ENSORLG00000011874	rbm25b	57	72.746	ENSPNYG00000022596	rbm25a	57	71.984	Pundamilia_nyererei
ENSORLG00000011874	rbm25b	57	80.556	ENSPNYG00000023303	rbm25b	57	78.390	Pundamilia_nyererei
ENSORLG00000011874	rbm25b	58	74.580	ENSPNAG00000012024	rbm25b	57	77.149	Pygocentrus_nattereri
ENSORLG00000011874	rbm25b	54	64.786	ENSRROG00000035556	RBM25	96	71.649	Rhinopithecus_roxellana
ENSORLG00000011874	rbm25b	57	74.098	ENSSFOG00015007093	rbm25	58	74.105	Scleropages_formosus
ENSORLG00000011874	rbm25b	59	81.612	ENSSMAG00000002520	rbm25b	58	83.263	Scophthalmus_maximus
ENSORLG00000011874	rbm25b	57	76.050	ENSSMAG00000009745	rbm25a	58	74.739	Scophthalmus_maximus
ENSORLG00000011874	rbm25b	55	78.166	ENSSDUG00000017984	rbm25a	58	76.409	Seriola_dumerili
ENSORLG00000011874	rbm25b	55	78.166	ENSSLDG00000010342	rbm25a	57	76.409	Seriola_lalandi_dorsalis
ENSORLG00000011874	rbm25b	56	88.840	ENSSLDG00000024573	rbm25b	99	88.840	Seriola_lalandi_dorsalis
ENSORLG00000011874	rbm25b	93	88.417	ENSSPAG00000016168	rbm25b	58	85.865	Stegastes_partitus
ENSORLG00000011874	rbm25b	55	75.693	ENSSPAG00000011114	rbm25a	58	74.743	Stegastes_partitus
ENSORLG00000011874	rbm25b	56	74.894	ENSTRUG00000003076	rbm25a	59	73.885	Takifugu_rubripes
ENSORLG00000011874	rbm25b	58	87.288	ENSTRUG00000017964	rbm25b	58	87.288	Takifugu_rubripes
ENSORLG00000011874	rbm25b	56	78.049	ENSTBEG00000010538	-	55	78.049	Tupaia_belangeri
ENSORLG00000011874	rbm25b	54	62.500	ENSUAMG00000007707	RBM25	99	69.143	Ursus_americanus
ENSORLG00000011874	rbm25b	52	64.979	ENSVPAG00000009052	RBM25	86	67.672	Vicugna_pacos
ENSORLG00000011874	rbm25b	95	62.252	ENSXETG00000021857	rbm25	57	73.093	Xenopus_tropicalis
ENSORLG00000011874	rbm25b	99	70.968	ENSXCOG00000004043	RBM25	57	71.340	Xiphophorus_couchianus
ENSORLG00000011874	rbm25b	99	67.692	ENSXMAG00000009077	RBM25	60	68.750	Xiphophorus_maculatus
ENSORLG00000011874	rbm25b	99	86.111	ENSXMAG00000017290	rbm25b	59	83.162	Xiphophorus_maculatus