EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000011968 (Gene tree)
Gene ID: 101173535
Gene Symbol: ddx28
Alias: -
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1668 bases
Position: chr3:26370101-26371768
Accession: 101173535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000014990	DEAD	PF00270.29	1.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000014991	-	1668	XM_004067397	ENSORLP00000014990	555 (aa)	XP_004067445	H2M912

Gene Model

Click here to download ENSORLG00000011968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000011968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000011968	ddx28	66	30.366	ENSORLG00000029482	ddx55	60	30.366
ENSORLG00000011968	ddx28	66	34.048	ENSORLG00000006688	DDX41	57	34.048
ENSORLG00000011968	ddx28	71	31.313	ENSORLG00000015021	ddx47	75	31.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000011968	ddx28	92	49.031	ENSG00000182810	DDX28	94	49.031	Homo_sapiens
ENSORLG00000011968	ddx28	100	75.221	ENSAPOG00000000991	ddx28	98	75.221	Acanthochromis_polyacanthus
ENSORLG00000011968	ddx28	91	49.320	ENSAMEG00000019426	DDX28	94	49.320	Ailuropoda_melanoleuca
ENSORLG00000011968	ddx28	100	73.322	ENSACIG00000021615	ddx28	100	73.322	Amphilophus_citrinellus
ENSORLG00000011968	ddx28	100	74.867	ENSAOCG00000004610	ddx28	98	74.867	Amphiprion_ocellaris
ENSORLG00000011968	ddx28	100	74.690	ENSAPEG00000002143	ddx28	98	74.690	Amphiprion_percula
ENSORLG00000011968	ddx28	99	75.714	ENSATEG00000018691	ddx28	99	75.714	Anabas_testudineus
ENSORLG00000011968	ddx28	91	46.351	ENSACAG00000009755	DDX28	93	46.351	Anolis_carolinensis
ENSORLG00000011968	ddx28	99	71.275	ENSACLG00000012984	ddx28	99	71.275	Astatotilapia_calliptera
ENSORLG00000011968	ddx28	92	62.998	ENSAMXG00000005878	ddx28	92	62.998	Astyanax_mexicanus
ENSORLG00000011968	ddx28	92	49.808	ENSBTAG00000004290	DDX28	93	49.808	Bos_taurus
ENSORLG00000011968	ddx28	91	48.828	ENSCAFG00000020327	DDX28	95	48.828	Canis_familiaris
ENSORLG00000011968	ddx28	91	48.828	ENSCAFG00020019785	DDX28	95	48.828	Canis_lupus_dingo
ENSORLG00000011968	ddx28	91	49.806	ENSCHIG00000009658	DDX28	93	49.806	Capra_hircus
ENSORLG00000011968	ddx28	91	49.222	ENSCPOG00000013746	DDX28	94	49.222	Cavia_porcellus
ENSORLG00000011968	ddx28	92	48.643	ENSCSAG00000018472	DDX28	93	48.643	Chlorocebus_sabaeus
ENSORLG00000011968	ddx28	83	49.892	ENSCPBG00000012105	DDX28	81	51.852	Chrysemys_picta_bellii
ENSORLG00000011968	ddx28	65	36.339	ENSCSAVG00000006341	-	94	36.339	Ciona_savignyi
ENSORLG00000011968	ddx28	88	48.594	ENSCGRG00001024412	Ddx28	94	48.594	Cricetulus_griseus_chok1gshd
ENSORLG00000011968	ddx28	94	68.571	ENSCSEG00000011651	ddx28	92	68.571	Cynoglossus_semilaevis
ENSORLG00000011968	ddx28	99	74.818	ENSCVAG00000004044	ddx28	98	74.818	Cyprinodon_variegatus
ENSORLG00000011968	ddx28	90	62.648	ENSDARG00000060411	ddx28	90	62.648	Danio_rerio
ENSORLG00000011968	ddx28	65	55.068	ENSDNOG00000033593	DDX28	98	55.068	Dasypus_novemcinctus
ENSORLG00000011968	ddx28	97	45.355	ENSDORG00000028868	Ddx28	99	46.182	Dipodomys_ordii
ENSORLG00000011968	ddx28	81	37.418	FBgn0086130	Dbp21E2	82	37.418	Drosophila_melanogaster
ENSORLG00000011968	ddx28	93	49.046	ENSETEG00000001062	-	95	49.046	Echinops_telfairi
ENSORLG00000011968	ddx28	74	41.489	ENSEBUG00000004791	ddx28	81	40.580	Eptatretus_burgeri
ENSORLG00000011968	ddx28	92	48.456	ENSEASG00005020387	DDX28	94	48.549	Equus_asinus_asinus
ENSORLG00000011968	ddx28	92	48.837	ENSECAG00000006451	DDX28	94	48.932	Equus_caballus
ENSORLG00000011968	ddx28	72	42.927	ENSEEUG00000005017	DDX28	94	42.927	Erinaceus_europaeus
ENSORLG00000011968	ddx28	92	66.794	ENSELUG00000005302	ddx28	98	67.375	Esox_lucius
ENSORLG00000011968	ddx28	91	49.222	ENSFCAG00000012858	DDX28	94	49.222	Felis_catus
ENSORLG00000011968	ddx28	99	71.634	ENSFHEG00000012573	ddx28	99	71.634	Fundulus_heteroclitus
ENSORLG00000011968	ddx28	93	69.732	ENSGMOG00000017045	ddx28	98	69.732	Gadus_morhua
ENSORLG00000011968	ddx28	91	45.174	ENSGALG00000048700	DDX28	90	44.782	Gallus_gallus
ENSORLG00000011968	ddx28	93	76.493	ENSGAFG00000009249	ddx28	92	76.493	Gambusia_affinis
ENSORLG00000011968	ddx28	92	74.708	ENSGACG00000016367	ddx28	95	74.708	Gasterosteus_aculeatus
ENSORLG00000011968	ddx28	78	48.513	ENSGAGG00000004565	DDX28	95	48.513	Gopherus_agassizii
ENSORLG00000011968	ddx28	92	49.225	ENSGGOG00000001220	DDX28	94	49.225	Gorilla_gorilla
ENSORLG00000011968	ddx28	99	74.327	ENSHBUG00000001016	ddx28	99	74.327	Haplochromis_burtoni
ENSORLG00000011968	ddx28	93	69.674	ENSHCOG00000017590	ddx28	93	69.674	Hippocampus_comes
ENSORLG00000011968	ddx28	98	59.325	ENSIPUG00000017350	Ddx28	98	59.325	Ictalurus_punctatus
ENSORLG00000011968	ddx28	97	48.276	ENSSTOG00000002064	DDX28	99	48.276	Ictidomys_tridecemlineatus
ENSORLG00000011968	ddx28	92	47.093	ENSJJAG00000012460	-	94	47.093	Jaculus_jaculus
ENSORLG00000011968	ddx28	95	76.749	ENSKMAG00000018183	ddx28	93	76.749	Kryptolebias_marmoratus
ENSORLG00000011968	ddx28	98	74.281	ENSLBEG00000006072	ddx28	98	74.281	Labrus_bergylta
ENSORLG00000011968	ddx28	94	54.876	ENSLACG00000005578	DDX28	90	54.876	Latimeria_chalumnae
ENSORLG00000011968	ddx28	93	59.962	ENSLOCG00000017604	ddx28	92	59.962	Lepisosteus_oculatus
ENSORLG00000011968	ddx28	91	49.611	ENSLAFG00000031239	DDX28	99	48.168	Loxodonta_africana
ENSORLG00000011968	ddx28	92	48.450	ENSMMUG00000010836	DDX28	93	48.450	Macaca_mulatta
ENSORLG00000011968	ddx28	94	75.908	ENSMAMG00000020220	ddx28	93	75.908	Mastacembelus_armatus
ENSORLG00000011968	ddx28	99	74.686	ENSMZEG00005009292	ddx28	99	74.686	Maylandia_zebra
ENSORLG00000011968	ddx28	91	39.766	ENSMICG00000012346	-	93	39.766	Microcebus_murinus
ENSORLG00000011968	ddx28	90	49.412	ENSMOCG00000009815	Ddx28	99	47.532	Microtus_ochrogaster
ENSORLG00000011968	ddx28	93	73.152	ENSMMOG00000000270	ddx28	92	73.152	Mola_mola
ENSORLG00000011968	ddx28	92	48.638	ENSMODG00000005303	DDX28	94	48.948	Monodelphis_domestica
ENSORLG00000011968	ddx28	95	75.047	ENSMALG00000008864	ddx28	93	75.047	Monopterus_albus
ENSORLG00000011968	ddx28	90	48.828	MGP_CAROLIEiJ_G0031510	Ddx28	93	48.828	Mus_caroli
ENSORLG00000011968	ddx28	90	48.633	ENSMUSG00000045538	Ddx28	93	48.633	Mus_musculus
ENSORLG00000011968	ddx28	90	48.638	MGP_PahariEiJ_G0023110	Ddx28	93	48.638	Mus_pahari
ENSORLG00000011968	ddx28	90	48.431	MGP_SPRETEiJ_G0032628	Ddx28	93	48.431	Mus_spretus
ENSORLG00000011968	ddx28	70	49.624	ENSMPUG00000006915	DDX28	98	49.624	Mustela_putorius_furo
ENSORLG00000011968	ddx28	91	48.833	ENSMLUG00000005899	DDX28	94	48.833	Myotis_lucifugus
ENSORLG00000011968	ddx28	90	48.924	ENSNGAG00000015762	Ddx28	93	49.119	Nannospalax_galili
ENSORLG00000011968	ddx28	99	74.506	ENSNBRG00000001337	ddx28	100	74.506	Neolamprologus_brichardi
ENSORLG00000011968	ddx28	99	74.686	ENSONIG00000020597	ddx28	99	74.686	Oreochromis_niloticus
ENSORLG00000011968	ddx28	91	50.097	ENSOCUG00000023074	DDX28	94	50.097	Oryctolagus_cuniculus
ENSORLG00000011968	ddx28	99	98.358	ENSORLG00020001951	ddx28	99	98.358	Oryzias_latipes_hni
ENSORLG00000011968	ddx28	99	97.628	ENSORLG00015023030	ddx28	99	97.628	Oryzias_latipes_hsok
ENSORLG00000011968	ddx28	100	87.344	ENSOMEG00000012445	ddx28	100	87.344	Oryzias_melastigma
ENSORLG00000011968	ddx28	92	49.130	ENSOGAG00000016895	DDX28	94	49.130	Otolemur_garnettii
ENSORLG00000011968	ddx28	79	47.884	ENSOARG00000003313	DDX28	99	47.884	Ovis_aries
ENSORLG00000011968	ddx28	92	46.899	ENSPPAG00000036971	DDX28	94	46.899	Pan_paniscus
ENSORLG00000011968	ddx28	91	49.612	ENSPPRG00000018322	DDX28	94	49.612	Panthera_pardus
ENSORLG00000011968	ddx28	91	47.868	ENSPTIG00000006444	DDX28	94	47.868	Panthera_tigris_altaica
ENSORLG00000011968	ddx28	92	49.031	ENSPTRG00000008258	DDX28	94	49.031	Pan_troglodytes
ENSORLG00000011968	ddx28	92	63.230	ENSPKIG00000021200	ddx28	94	63.230	Paramormyrops_kingsleyae
ENSORLG00000011968	ddx28	50	58.333	ENSPSIG00000001127	DDX28	91	58.333	Pelodiscus_sinensis
ENSORLG00000011968	ddx28	96	67.837	ENSPMGG00000007908	ddx28	95	67.837	Periophthalmus_magnuspinnatus
ENSORLG00000011968	ddx28	90	48.438	ENSPEMG00000003395	Ddx28	93	48.438	Peromyscus_maniculatus_bairdii
ENSORLG00000011968	ddx28	95	76.660	ENSPFOG00000020838	DDX28	93	76.660	Poecilia_formosa
ENSORLG00000011968	ddx28	95	76.660	ENSPFOG00000020952	ddx28	92	76.660	Poecilia_formosa
ENSORLG00000011968	ddx28	95	75.901	ENSPLAG00000016292	ddx28	92	75.901	Poecilia_latipinna
ENSORLG00000011968	ddx28	95	76.850	ENSPMEG00000011311	ddx28	91	76.850	Poecilia_mexicana
ENSORLG00000011968	ddx28	95	76.660	ENSPREG00000002899	ddx28	92	76.660	Poecilia_reticulata
ENSORLG00000011968	ddx28	92	48.643	ENSPPYG00000007481	DDX28	94	48.643	Pongo_abelii
ENSORLG00000011968	ddx28	91	49.709	ENSPCOG00000024632	DDX28	94	49.709	Propithecus_coquereli
ENSORLG00000011968	ddx28	99	74.686	ENSPNYG00000018804	ddx28	99	74.686	Pundamilia_nyererei
ENSORLG00000011968	ddx28	93	62.830	ENSPNAG00000014597	ddx28	97	62.830	Pygocentrus_nattereri
ENSORLG00000011968	ddx28	90	48.256	ENSRNOG00000019817	Ddx28	93	48.256	Rattus_norvegicus
ENSORLG00000011968	ddx28	99	60.753	ENSSFOG00015010181	ddx28	99	60.573	Scleropages_formosus
ENSORLG00000011968	ddx28	92	76.218	ENSSMAG00000006831	ddx28	96	76.218	Scophthalmus_maximus
ENSORLG00000011968	ddx28	99	74.867	ENSSDUG00000003257	ddx28	98	74.735	Seriola_dumerili
ENSORLG00000011968	ddx28	99	74.159	ENSSLDG00000004513	ddx28	98	74.159	Seriola_lalandi_dorsalis
ENSORLG00000011968	ddx28	97	47.731	ENSSARG00000014169	DDX28	99	47.731	Sorex_araneus
ENSORLG00000011968	ddx28	100	73.451	ENSSPAG00000000988	ddx28	100	73.451	Stegastes_partitus
ENSORLG00000011968	ddx28	91	48.738	ENSSSCG00000026038	DDX28	94	48.643	Sus_scrofa
ENSORLG00000011968	ddx28	98	70.404	ENSTRUG00000007815	ddx28	98	70.404	Takifugu_rubripes
ENSORLG00000011968	ddx28	90	72.311	ENSTNIG00000011352	ddx28	99	72.311	Tetraodon_nigroviridis
ENSORLG00000011968	ddx28	74	61.033	ENSTBEG00000017695	DDX28	76	61.033	Tupaia_belangeri
ENSORLG00000011968	ddx28	91	49.222	ENSUAMG00000016116	DDX28	99	47.802	Ursus_americanus
ENSORLG00000011968	ddx28	78	50.455	ENSUMAG00000019200	DDX28	88	50.455	Ursus_maritimus
ENSORLG00000011968	ddx28	75	44.076	ENSVVUG00000012876	DDX28	82	44.076	Vulpes_vulpes
ENSORLG00000011968	ddx28	90	46.906	ENSXETG00000005435	ddx28	97	46.906	Xenopus_tropicalis
ENSORLG00000011968	ddx28	99	73.874	ENSXCOG00000012364	ddx28	98	73.874	Xiphophorus_couchianus
ENSORLG00000011968	ddx28	92	77.237	ENSXMAG00000019603	ddx28	93	77.237	Xiphophorus_maculatus