EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000012154 (Gene tree)
Gene ID: 101156012
Gene Symbol: rbm38
Alias: -
Full Name: RNA-binding protein 38
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 20481 bases
Position: chr7:18992560-19013040
Accession: 101156012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000015205	RRM_1	PF00076.22	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000015206	-	1070	XM_004070803	ENSORLP00000015205	251 (aa)	XP_004070851	H2M9L4

Gene Model

Click here to download ENSORLG00000012154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000012154	rbm38	67	36.620	ENSORLG00000008278	dazap1	67	36.620
ENSORLG00000012154	rbm38	62	64.815	ENSORLG00000007916	rbm24b	100	53.360
ENSORLG00000012154	rbm38	98	56.746	ENSORLG00000027180	-	99	56.746
ENSORLG00000012154	rbm38	54	71.111	ENSORLG00000012546	rbm24a	100	54.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012154	rbm38	91	55.128	ENSG00000132819	RBM38	94	79.487	Homo_sapiens
ENSORLG00000012154	rbm38	100	84.462	ENSAPOG00000003301	rbm38	100	84.462	Acanthochromis_polyacanthus
ENSORLG00000012154	rbm38	98	58.333	ENSAPOG00000009939	-	99	58.800	Acanthochromis_polyacanthus
ENSORLG00000012154	rbm38	100	82.072	ENSACIG00000000010	rbm38	100	82.072	Amphilophus_citrinellus
ENSORLG00000012154	rbm38	98	59.289	ENSACIG00000012502	-	100	80.342	Amphilophus_citrinellus
ENSORLG00000012154	rbm38	96	58.607	ENSAOCG00000012559	RBM38	99	59.091	Amphiprion_ocellaris
ENSORLG00000012154	rbm38	100	84.861	ENSAOCG00000013497	-	100	84.861	Amphiprion_ocellaris
ENSORLG00000012154	rbm38	98	57.937	ENSAPEG00000023581	-	99	58.400	Amphiprion_percula
ENSORLG00000012154	rbm38	100	84.861	ENSAPEG00000013137	rbm38	100	84.861	Amphiprion_percula
ENSORLG00000012154	rbm38	98	57.540	ENSATEG00000016710	-	100	57.540	Anabas_testudineus
ENSORLG00000012154	rbm38	100	79.681	ENSATEG00000016366	rbm38	100	79.681	Anabas_testudineus
ENSORLG00000012154	rbm38	93	54.812	ENSACAG00000016238	RBM38	90	54.393	Anolis_carolinensis
ENSORLG00000012154	rbm38	93	55.230	ENSANAG00000031959	RBM38	78	87.368	Aotus_nancymaae
ENSORLG00000012154	rbm38	98	59.216	ENSACLG00000019514	-	100	57.540	Astatotilapia_calliptera
ENSORLG00000012154	rbm38	98	56.972	ENSAMXG00000015601	-	100	56.574	Astyanax_mexicanus
ENSORLG00000012154	rbm38	94	54.894	ENSAMXG00000038120	rbm38	76	63.736	Astyanax_mexicanus
ENSORLG00000012154	rbm38	91	55.556	ENSBTAG00000008105	RBM38	89	56.410	Bos_taurus
ENSORLG00000012154	rbm38	91	54.701	ENSCJAG00000019139	RBM38	78	87.368	Callithrix_jacchus
ENSORLG00000012154	rbm38	91	55.556	ENSCAFG00020021943	RBM38	89	56.410	Canis_lupus_dingo
ENSORLG00000012154	rbm38	91	54.274	ENSCHIG00000002609	RBM38	89	55.128	Capra_hircus
ENSORLG00000012154	rbm38	91	55.556	ENSCPOG00000012781	RBM38	89	56.410	Cavia_porcellus
ENSORLG00000012154	rbm38	91	54.701	ENSCCAG00000036872	RBM38	78	87.368	Cebus_capucinus
ENSORLG00000012154	rbm38	77	60.914	ENSCATG00000032133	RBM38	78	87.368	Cercocebus_atys
ENSORLG00000012154	rbm38	93	55.230	ENSCLAG00000005906	RBM38	92	56.410	Chinchilla_lanigera
ENSORLG00000012154	rbm38	77	60.914	ENSCSAG00000015503	RBM38	89	56.410	Chlorocebus_sabaeus
ENSORLG00000012154	rbm38	93	56.067	ENSCPBG00000024059	RBM38	100	54.812	Chrysemys_picta_bellii
ENSORLG00000012154	rbm38	59	60.510	ENSCING00000025102	-	66	60.510	Ciona_intestinalis
ENSORLG00000012154	rbm38	61	59.494	ENSCSAVG00000001132	-	58	60.127	Ciona_savignyi
ENSORLG00000012154	rbm38	80	46.000	ENSCANG00000030105	-	80	43.038	Colobus_angolensis_palliatus
ENSORLG00000012154	rbm38	72	62.295	ENSCGRG00001012928	Rbm38	89	55.983	Cricetulus_griseus_chok1gshd
ENSORLG00000012154	rbm38	81	63.547	ENSCSEG00000020943	rbm38	62	65.241	Cynoglossus_semilaevis
ENSORLG00000012154	rbm38	98	57.937	ENSCSEG00000004701	-	100	58.730	Cynoglossus_semilaevis
ENSORLG00000012154	rbm38	98	59.127	ENSCVAG00000005472	-	96	60.744	Cyprinodon_variegatus
ENSORLG00000012154	rbm38	100	78.088	ENSCVAG00000015952	rbm38	100	80.478	Cyprinodon_variegatus
ENSORLG00000012154	rbm38	97	58.468	ENSDARG00000058818	rbm38	99	58.468	Danio_rerio
ENSORLG00000012154	rbm38	76	59.585	ENSDNOG00000032004	RBM38	85	61.202	Dasypus_novemcinctus
ENSORLG00000012154	rbm38	91	55.128	ENSECAG00000007700	RBM38	89	55.983	Equus_caballus
ENSORLG00000012154	rbm38	91	54.894	ENSEEUG00000013489	RBM38	89	54.894	Erinaceus_europaeus
ENSORLG00000012154	rbm38	98	57.031	ENSELUG00000005849	-	100	56.589	Esox_lucius
ENSORLG00000012154	rbm38	91	64.192	ENSELUG00000000585	-	99	64.192	Esox_lucius
ENSORLG00000012154	rbm38	74	61.702	ENSFCAG00000042916	RBM38	78	86.316	Felis_catus
ENSORLG00000012154	rbm38	69	65.341	ENSFALG00000010805	RBM38	89	65.341	Ficedula_albicollis
ENSORLG00000012154	rbm38	100	82.540	ENSFHEG00000017748	rbm38	100	82.540	Fundulus_heteroclitus
ENSORLG00000012154	rbm38	98	59.524	ENSFHEG00000006160	-	96	60.081	Fundulus_heteroclitus
ENSORLG00000012154	rbm38	75	63.351	ENSGMOG00000016655	-	97	67.213	Gadus_morhua
ENSORLG00000012154	rbm38	93	56.067	ENSGALG00000026081	RBM38	100	55.649	Gallus_gallus
ENSORLG00000012154	rbm38	93	71.795	ENSGACG00000015224	rbm38	100	71.795	Gasterosteus_aculeatus
ENSORLG00000012154	rbm38	93	56.303	ENSGACG00000009873	-	100	56.303	Gasterosteus_aculeatus
ENSORLG00000012154	rbm38	93	55.649	ENSGAGG00000001187	RBM38	100	54.393	Gopherus_agassizii
ENSORLG00000012154	rbm38	100	82.072	ENSHBUG00000012058	rbm38	100	82.072	Haplochromis_burtoni
ENSORLG00000012154	rbm38	98	59.216	ENSHBUG00000011778	-	100	57.937	Haplochromis_burtoni
ENSORLG00000012154	rbm38	93	55.230	ENSHGLG00000015077	RBM38	89	56.410	Heterocephalus_glaber_female
ENSORLG00000012154	rbm38	80	64.039	ENSHCOG00000005622	-	57	64.532	Hippocampus_comes
ENSORLG00000012154	rbm38	100	59.127	ENSHCOG00000019040	rbm38	100	59.127	Hippocampus_comes
ENSORLG00000012154	rbm38	94	56.432	ENSIPUG00000019349	-	96	56.432	Ictalurus_punctatus
ENSORLG00000012154	rbm38	91	70.763	ENSKMAG00000012402	rbm38	99	71.186	Kryptolebias_marmoratus
ENSORLG00000012154	rbm38	98	58.333	ENSLBEG00000016163	RBM38	100	58.333	Labrus_bergylta
ENSORLG00000012154	rbm38	100	80.876	ENSLBEG00000018878	rbm38	100	80.876	Labrus_bergylta
ENSORLG00000012154	rbm38	98	58.233	ENSLOCG00000003456	rbm38	100	57.371	Lepisosteus_oculatus
ENSORLG00000012154	rbm38	77	60.914	ENSMFAG00000043808	RBM38	78	87.368	Macaca_fascicularis
ENSORLG00000012154	rbm38	77	60.914	ENSMMUG00000031391	RBM38	78	87.368	Macaca_mulatta
ENSORLG00000012154	rbm38	77	60.914	ENSMNEG00000034683	RBM38	78	87.368	Macaca_nemestrina
ENSORLG00000012154	rbm38	98	57.371	ENSMAMG00000020499	RBM38	100	57.371	Mastacembelus_armatus
ENSORLG00000012154	rbm38	100	82.869	ENSMAMG00000024135	rbm38	100	82.869	Mastacembelus_armatus
ENSORLG00000012154	rbm38	100	82.072	ENSMZEG00005026036	rbm38	100	82.072	Maylandia_zebra
ENSORLG00000012154	rbm38	98	59.216	ENSMZEG00005000849	-	100	57.937	Maylandia_zebra
ENSORLG00000012154	rbm38	72	63.388	ENSMAUG00000021211	Rbm38	89	57.265	Mesocricetus_auratus
ENSORLG00000012154	rbm38	93	54.812	ENSMICG00000038011	RBM38	98	55.556	Microcebus_murinus
ENSORLG00000012154	rbm38	72	62.842	ENSMOCG00000008715	Rbm38	89	56.838	Microtus_ochrogaster
ENSORLG00000012154	rbm38	98	57.937	ENSMMOG00000020051	-	100	57.937	Mola_mola
ENSORLG00000012154	rbm38	78	61.809	ENSMODG00000016458	RBM38	94	55.967	Monodelphis_domestica
ENSORLG00000012154	rbm38	100	66.932	ENSMALG00000022327	rbm38	100	68.526	Monopterus_albus
ENSORLG00000012154	rbm38	75	66.316	ENSMALG00000004680	RBM38	71	66.316	Monopterus_albus
ENSORLG00000012154	rbm38	91	54.701	MGP_CAROLIEiJ_G0024745	Rbm38	63	82.000	Mus_caroli
ENSORLG00000012154	rbm38	91	54.701	ENSMUSG00000027510	Rbm38	63	82.000	Mus_musculus
ENSORLG00000012154	rbm38	91	54.701	MGP_PahariEiJ_G0026186	Rbm38	63	82.000	Mus_pahari
ENSORLG00000012154	rbm38	91	54.701	MGP_SPRETEiJ_G0025665	Rbm38	63	82.000	Mus_spretus
ENSORLG00000012154	rbm38	74	62.234	ENSMPUG00000006518	RBM38	91	62.234	Mustela_putorius_furo
ENSORLG00000012154	rbm38	76	62.564	ENSMLUG00000011140	RBM38	98	55.983	Myotis_lucifugus
ENSORLG00000012154	rbm38	98	59.216	ENSNBRG00000022545	-	100	57.540	Neolamprologus_brichardi
ENSORLG00000012154	rbm38	100	81.673	ENSNBRG00000022685	rbm38	100	81.673	Neolamprologus_brichardi
ENSORLG00000012154	rbm38	52	68.702	ENSMEUG00000005475	-	96	68.702	Notamacropus_eugenii
ENSORLG00000012154	rbm38	91	55.128	ENSODEG00000007980	RBM38	89	55.983	Octodon_degus
ENSORLG00000012154	rbm38	98	82.114	ENSONIG00000017073	rbm38	100	82.114	Oreochromis_niloticus
ENSORLG00000012154	rbm38	98	59.055	ENSONIG00000020324	-	100	57.371	Oreochromis_niloticus
ENSORLG00000012154	rbm38	91	54.274	ENSOANG00000009259	RBM38	81	54.936	Ornithorhynchus_anatinus
ENSORLG00000012154	rbm38	98	56.746	ENSORLG00020020751	-	99	56.746	Oryzias_latipes_hni
ENSORLG00000012154	rbm38	100	98.406	ENSORLG00020017871	rbm38	100	98.406	Oryzias_latipes_hni
ENSORLG00000012154	rbm38	98	56.917	ENSORLG00015017040	-	99	58.566	Oryzias_latipes_hsok
ENSORLG00000012154	rbm38	100	98.805	ENSORLG00015012606	rbm38	100	98.805	Oryzias_latipes_hsok
ENSORLG00000012154	rbm38	100	94.422	ENSOMEG00000006805	rbm38	100	94.422	Oryzias_melastigma
ENSORLG00000012154	rbm38	98	55.556	ENSOMEG00000023912	-	99	56.000	Oryzias_melastigma
ENSORLG00000012154	rbm38	91	55.556	ENSOGAG00000029136	RBM38	88	56.410	Otolemur_garnettii
ENSORLG00000012154	rbm38	74	61.702	ENSPPRG00000009507	RBM38	78	86.316	Panthera_pardus
ENSORLG00000012154	rbm38	50	78.400	ENSPTRG00000045845	-	68	78.400	Pan_troglodytes
ENSORLG00000012154	rbm38	75	61.458	ENSPTRG00000013661	RBM38	78	87.368	Pan_troglodytes
ENSORLG00000012154	rbm38	77	60.914	ENSPANG00000020919	-	78	87.368	Papio_anubis
ENSORLG00000012154	rbm38	95	45.714	ENSPANG00000033127	-	96	46.122	Papio_anubis
ENSORLG00000012154	rbm38	100	53.906	ENSPKIG00000025417	rbm38	100	55.686	Paramormyrops_kingsleyae
ENSORLG00000012154	rbm38	93	57.203	ENSPKIG00000018122	-	100	76.923	Paramormyrops_kingsleyae
ENSORLG00000012154	rbm38	93	55.230	ENSPSIG00000011649	RBM38	92	55.230	Pelodiscus_sinensis
ENSORLG00000012154	rbm38	98	57.087	ENSPMGG00000017094	-	96	57.551	Periophthalmus_magnuspinnatus
ENSORLG00000012154	rbm38	100	69.048	ENSPMGG00000011343	rbm38	100	70.635	Periophthalmus_magnuspinnatus
ENSORLG00000012154	rbm38	95	56.790	ENSPCIG00000013648	RBM38	94	56.379	Phascolarctos_cinereus
ENSORLG00000012154	rbm38	100	79.608	ENSPFOG00000011658	rbm38	100	82.745	Poecilia_formosa
ENSORLG00000012154	rbm38	98	58.594	ENSPLAG00000002500	-	100	58.893	Poecilia_latipinna
ENSORLG00000012154	rbm38	100	79.216	ENSPLAG00000005218	rbm38	100	82.353	Poecilia_latipinna
ENSORLG00000012154	rbm38	100	78.431	ENSPMEG00000015770	rbm38	100	83.137	Poecilia_mexicana
ENSORLG00000012154	rbm38	100	79.216	ENSPREG00000007398	rbm38	100	82.353	Poecilia_reticulata
ENSORLG00000012154	rbm38	91	55.556	ENSPCOG00000026201	RBM38	80	84.848	Propithecus_coquereli
ENSORLG00000012154	rbm38	72	38.798	ENSPVAG00000006457	RBM38	89	37.179	Pteropus_vampyrus
ENSORLG00000012154	rbm38	98	59.216	ENSPNYG00000019727	-	100	80.342	Pundamilia_nyererei
ENSORLG00000012154	rbm38	100	81.673	ENSPNYG00000021373	rbm38	100	81.673	Pundamilia_nyererei
ENSORLG00000012154	rbm38	90	58.051	ENSPNAG00000010596	rbm38	96	55.285	Pygocentrus_nattereri
ENSORLG00000012154	rbm38	98	58.964	ENSPNAG00000015123	-	91	78.814	Pygocentrus_nattereri
ENSORLG00000012154	rbm38	91	55.983	ENSRNOG00000006420	Rbm38	89	55.983	Rattus_norvegicus
ENSORLG00000012154	rbm38	93	49.576	ENSRROG00000036388	-	89	50.424	Rhinopithecus_roxellana
ENSORLG00000012154	rbm38	91	54.701	ENSSBOG00000031053	RBM38	88	87.368	Saimiri_boliviensis_boliviensis
ENSORLG00000012154	rbm38	94	55.417	ENSSFOG00015004453	rbm38	95	57.083	Scleropages_formosus
ENSORLG00000012154	rbm38	100	84.064	ENSSDUG00000022611	rbm38	100	84.064	Seriola_dumerili
ENSORLG00000012154	rbm38	98	57.937	ENSSDUG00000021082	RBM38	100	57.937	Seriola_dumerili
ENSORLG00000012154	rbm38	98	58.333	ENSSLDG00000011778	RBM38	100	58.333	Seriola_lalandi_dorsalis
ENSORLG00000012154	rbm38	100	84.064	ENSSLDG00000010845	rbm38	100	84.064	Seriola_lalandi_dorsalis
ENSORLG00000012154	rbm38	98	58.333	ENSSPAG00000020989	RBM38	100	58.333	Stegastes_partitus
ENSORLG00000012154	rbm38	100	84.462	ENSSPAG00000011113	rbm38	100	84.462	Stegastes_partitus
ENSORLG00000012154	rbm38	91	55.128	ENSSSCG00000007504	RBM38	89	55.983	Sus_scrofa
ENSORLG00000012154	rbm38	98	59.127	ENSTRUG00000019869	-	100	59.127	Takifugu_rubripes
ENSORLG00000012154	rbm38	100	73.705	ENSTRUG00000024954	rbm38	100	74.104	Takifugu_rubripes
ENSORLG00000012154	rbm38	93	61.506	ENSTNIG00000007093	-	100	61.506	Tetraodon_nigroviridis
ENSORLG00000012154	rbm38	74	61.702	ENSUAMG00000019780	RBM38	89	55.983	Ursus_americanus
ENSORLG00000012154	rbm38	91	55.556	ENSVVUG00000017246	RBM38	89	56.410	Vulpes_vulpes
ENSORLG00000012154	rbm38	76	61.538	ENSXETG00000011268	rbm38	99	55.372	Xenopus_tropicalis
ENSORLG00000012154	rbm38	100	80.876	ENSXMAG00000023662	rbm38	100	84.064	Xiphophorus_maculatus