EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000012188 (Gene tree)
Gene ID: 111949076
Gene Symbol: -
Alias: -
Full Name: apoptotic chromatin condensation inducer 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 17455 bases
Position: chr17:17729178-17746632
Accession: 111949076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042705	SAP	PF02037.27	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000015255	-	3602	-	ENSORLP00000015254	560 (aa)	-	H2M9R2
ENSORLT00000044127	-	6813	XM_023965321	ENSORLP00000042705	1655 (aa)	XP_023821089	-

Gene Model

Click here to download ENSORLG00000012188's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG
ola03015	mRNA surveillance pathway	KEGG
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012188	-	95	66.392	ENSAPOG00000015331	-	99	70.536	Acanthochromis_polyacanthus
ENSORLG00000012188	-	95	65.925	ENSAOCG00000016504	-	99	71.053	Amphiprion_ocellaris
ENSORLG00000012188	-	95	65.041	ENSAPEG00000020100	-	66	71.184	Amphiprion_percula
ENSORLG00000012188	-	95	65.376	ENSATEG00000007348	-	99	64.562	Anabas_testudineus
ENSORLG00000012188	-	92	62.006	ENSACLG00000019938	-	69	55.380	Astatotilapia_calliptera
ENSORLG00000012188	-	65	96.809	ENSELUG00000004511	acin1a	80	96.117	Esox_lucius
ENSORLG00000012188	-	53	96.117	ENSGMOG00000014877	acin1a	56	96.117	Gadus_morhua
ENSORLG00000012188	-	63	55.738	ENSGAFG00000015171	-	94	77.962	Gambusia_affinis
ENSORLG00000012188	-	81	63.830	ENSGACG00000014063	acin1a	63	75.847	Gasterosteus_aculeatus
ENSORLG00000012188	-	92	63.151	ENSHBUG00000002970	-	66	55.618	Haplochromis_burtoni
ENSORLG00000012188	-	52	55.227	ENSIPUG00000006269	acin1b	69	70.922	Ictalurus_punctatus
ENSORLG00000012188	-	95	62.874	ENSKMAG00000020228	-	58	69.010	Kryptolebias_marmoratus
ENSORLG00000012188	-	92	62.006	ENSMZEG00005012139	-	69	55.380	Maylandia_zebra
ENSORLG00000012188	-	60	96.330	ENSONIG00000015556	acin1a	68	89.610	Oreochromis_niloticus
ENSORLG00000012188	-	100	94.072	ENSORLG00020007737	-	100	96.620	Oryzias_latipes_hni
ENSORLG00000012188	-	98	97.548	ENSORLG00015002304	-	100	97.548	Oryzias_latipes_hsok
ENSORLG00000012188	-	58	52.438	ENSPMGG00000019929	-	66	56.048	Periophthalmus_magnuspinnatus
ENSORLG00000012188	-	82	70.435	ENSPFOG00000016546	-	80	70.000	Poecilia_formosa
ENSORLG00000012188	-	90	68.775	ENSPLAG00000018260	-	99	58.629	Poecilia_latipinna
ENSORLG00000012188	-	95	63.626	ENSSMAG00000014213	-	98	60.223	Scophthalmus_maximus
ENSORLG00000012188	-	58	65.571	ENSSDUG00000012164	-	93	54.306	Seriola_dumerili
ENSORLG00000012188	-	95	64.702	ENSSLDG00000001566	-	99	66.102	Seriola_lalandi_dorsalis