EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000012330 (Gene tree)
Gene ID: 101157453
Gene Symbol: ddx23
Alias: -
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6539 bases
Position: chr7:19107006-19113544
Accession: 101157453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000015434	DEAD	PF00270.29	8.2e-53	1	1
ENSORLP00000034590	DEAD	PF00270.29	8.9e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000015435	-	2334	-	ENSORLP00000015434	777 (aa)	-	H2MA85
ENSORLT00000042292	-	2673	XM_004070809	ENSORLP00000034590	802 (aa)	XP_004070857	UPI0002A4A577

Gene Model

Click here to download ENSORLG00000012330's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000012330	ddx23	52	30.657	ENSORLG00000008838	eif4a2	91	30.657
ENSORLG00000012330	ddx23	52	31.068	ENSORLG00000009178	-	74	31.068
ENSORLG00000012330	ddx23	53	41.232	ENSORLG00000015098	ddx5	69	46.500
ENSORLG00000012330	ddx23	58	39.024	ENSORLG00000013685	si:dkey-156n14.5	65	38.248
ENSORLG00000012330	ddx23	59	37.310	ENSORLG00000000866	DDX5	80	35.732
ENSORLG00000012330	ddx23	53	31.132	ENSORLG00000002506	ddx6	77	31.132
ENSORLG00000012330	ddx23	55	40.774	ENSORLG00000002267	ddx43	62	40.596
ENSORLG00000012330	ddx23	53	37.857	ENSORLG00000013621	-	64	37.857
ENSORLG00000012330	ddx23	51	36.548	ENSORLG00000020672	ddx4	60	36.548
ENSORLG00000012330	ddx23	56	34.763	ENSORLG00000006897	ddx59	66	34.763
ENSORLG00000012330	ddx23	53	40.436	ENSORLG00000014497	-	78	38.741
ENSORLG00000012330	ddx23	54	39.631	ENSORLG00000006688	DDX41	65	39.269
ENSORLG00000012330	ddx23	51	35.190	ENSORLG00000015021	ddx47	74	35.190
ENSORLG00000012330	ddx23	59	34.470	ENSORLG00000025640	-	68	34.470

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012330	ddx23	100	82.948	ENSG00000174243	DDX23	100	82.561	Homo_sapiens
ENSORLG00000012330	ddx23	100	92.308	ENSAPOG00000003760	ddx23	100	92.308	Acanthochromis_polyacanthus
ENSORLG00000012330	ddx23	100	82.909	ENSAMEG00000007123	DDX23	100	82.195	Ailuropoda_melanoleuca
ENSORLG00000012330	ddx23	100	86.873	ENSACIG00000000022	ddx23	100	90.372	Amphilophus_citrinellus
ENSORLG00000012330	ddx23	100	92.308	ENSAOCG00000017348	ddx23	100	92.308	Amphiprion_ocellaris
ENSORLG00000012330	ddx23	100	92.060	ENSAPEG00000016857	ddx23	100	92.060	Amphiprion_percula
ENSORLG00000012330	ddx23	100	92.556	ENSATEG00000016800	ddx23	100	92.556	Anabas_testudineus
ENSORLG00000012330	ddx23	91	79.235	ENSAPLG00000002868	DDX23	83	83.918	Anas_platyrhynchos
ENSORLG00000012330	ddx23	100	82.667	ENSACAG00000025589	DDX23	91	84.942	Anolis_carolinensis
ENSORLG00000012330	ddx23	100	82.826	ENSANAG00000018663	DDX23	100	82.439	Aotus_nancymaae
ENSORLG00000012330	ddx23	94	90.765	ENSAMXG00000017597	ddx23	100	87.454	Astyanax_mexicanus
ENSORLG00000012330	ddx23	100	83.069	ENSBTAG00000021810	DDX23	100	82.195	Bos_taurus
ENSORLG00000012330	ddx23	75	67.298	WBGene00017162	ddx-23	79	67.298	Caenorhabditis_elegans
ENSORLG00000012330	ddx23	100	83.069	ENSCJAG00000020775	DDX23	100	82.439	Callithrix_jacchus
ENSORLG00000012330	ddx23	100	82.582	ENSCAFG00000025422	DDX23	100	81.707	Canis_familiaris
ENSORLG00000012330	ddx23	100	82.582	ENSCAFG00020013383	DDX23	100	81.707	Canis_lupus_dingo
ENSORLG00000012330	ddx23	100	82.948	ENSCHIG00000018783	DDX23	100	82.073	Capra_hircus
ENSORLG00000012330	ddx23	100	82.704	ENSTSYG00000005429	DDX23	100	81.829	Carlito_syrichta
ENSORLG00000012330	ddx23	100	82.195	ENSCPOG00000003278	DDX23	100	81.929	Cavia_porcellus
ENSORLG00000012330	ddx23	89	95.000	ENSCCAG00000029177	DDX23	100	95.000	Cebus_capucinus
ENSORLG00000012330	ddx23	100	71.763	ENSCATG00000032335	-	100	70.741	Cercocebus_atys
ENSORLG00000012330	ddx23	100	82.948	ENSCATG00000039797	DDX23	100	82.561	Cercocebus_atys
ENSORLG00000012330	ddx23	100	82.826	ENSCLAG00000002986	DDX23	100	82.051	Chinchilla_lanigera
ENSORLG00000012330	ddx23	100	82.948	ENSCSAG00000006240	DDX23	100	82.561	Chlorocebus_sabaeus
ENSORLG00000012330	ddx23	75	85.785	ENSCHOG00000009027	DDX23	100	79.797	Choloepus_hoffmanni
ENSORLG00000012330	ddx23	100	83.313	ENSCPBG00000019988	DDX23	95	85.530	Chrysemys_picta_bellii
ENSORLG00000012330	ddx23	97	69.654	ENSCING00000001913	-	89	74.231	Ciona_intestinalis
ENSORLG00000012330	ddx23	85	66.276	ENSCSAVG00000004158	-	100	66.276	Ciona_savignyi
ENSORLG00000012330	ddx23	100	70.012	ENSCANG00000042510	-	100	68.781	Colobus_angolensis_palliatus
ENSORLG00000012330	ddx23	89	88.920	ENSCANG00000040182	DDX23	96	91.202	Colobus_angolensis_palliatus
ENSORLG00000012330	ddx23	92	87.045	ENSCGRG00001015090	Ddx23	100	82.173	Cricetulus_griseus_chok1gshd
ENSORLG00000012330	ddx23	92	87.045	ENSCGRG00000016314	Ddx23	100	82.173	Cricetulus_griseus_crigri
ENSORLG00000012330	ddx23	85	93.988	ENSCSEG00000020970	ddx23	100	88.656	Cynoglossus_semilaevis
ENSORLG00000012330	ddx23	100	92.441	ENSCVAG00000015745	ddx23	100	92.050	Cyprinodon_variegatus
ENSORLG00000012330	ddx23	89	92.827	ENSDARG00000021945	ddx23	100	87.871	Danio_rerio
ENSORLG00000012330	ddx23	100	79.684	ENSDNOG00000043176	DDX23	100	82.317	Dasypus_novemcinctus
ENSORLG00000012330	ddx23	100	83.030	ENSDORG00000012659	Ddx23	100	82.317	Dipodomys_ordii
ENSORLG00000012330	ddx23	87	68.759	FBgn0032690	CG10333	85	70.732	Drosophila_melanogaster
ENSORLG00000012330	ddx23	92	84.730	ENSETEG00000015816	DDX23	99	81.762	Echinops_telfairi
ENSORLG00000012330	ddx23	92	78.103	ENSEBUG00000003319	ddx23	93	82.879	Eptatretus_burgeri
ENSORLG00000012330	ddx23	100	82.909	ENSEASG00005000455	DDX23	100	82.195	Equus_asinus_asinus
ENSORLG00000012330	ddx23	100	83.030	ENSECAG00000016681	DDX23	100	82.317	Equus_caballus
ENSORLG00000012330	ddx23	100	75.331	ENSEEUG00000009658	DDX23	100	74.696	Erinaceus_europaeus
ENSORLG00000012330	ddx23	100	87.438	ENSELUG00000015358	ddx23	100	86.700	Esox_lucius
ENSORLG00000012330	ddx23	100	82.582	ENSFCAG00000000082	DDX23	100	82.195	Felis_catus
ENSORLG00000012330	ddx23	94	84.462	ENSFALG00000000133	DDX23	100	80.515	Ficedula_albicollis
ENSORLG00000012330	ddx23	100	83.191	ENSFDAG00000017059	DDX23	100	82.295	Fukomys_damarensis
ENSORLG00000012330	ddx23	100	92.184	ENSFHEG00000017499	ddx23	100	92.184	Fundulus_heteroclitus
ENSORLG00000012330	ddx23	99	87.970	ENSGMOG00000009592	ddx23	100	85.804	Gadus_morhua
ENSORLG00000012330	ddx23	92	87.802	ENSGALG00000032307	DDX23	100	82.843	Gallus_gallus
ENSORLG00000012330	ddx23	100	92.308	ENSGAFG00000012366	ddx23	100	92.308	Gambusia_affinis
ENSORLG00000012330	ddx23	99	90.428	ENSGACG00000003024	ddx23	99	94.799	Gasterosteus_aculeatus
ENSORLG00000012330	ddx23	100	83.313	ENSGAGG00000007790	DDX23	100	83.272	Gopherus_agassizii
ENSORLG00000012330	ddx23	100	82.948	ENSGGOG00000015252	DDX23	100	93.421	Gorilla_gorilla
ENSORLG00000012330	ddx23	100	91.067	ENSHBUG00000011876	ddx23	100	91.687	Haplochromis_burtoni
ENSORLG00000012330	ddx23	100	82.948	ENSHGLG00000004292	DDX23	100	82.173	Heterocephalus_glaber_female
ENSORLG00000012330	ddx23	100	82.948	ENSHGLG00100017585	DDX23	100	82.173	Heterocephalus_glaber_male
ENSORLG00000012330	ddx23	100	90.447	ENSHCOG00000019338	ddx23	100	91.191	Hippocampus_comes
ENSORLG00000012330	ddx23	94	90.476	ENSIPUG00000005247	DDX23	100	87.376	Ictalurus_punctatus
ENSORLG00000012330	ddx23	100	82.826	ENSSTOG00000004219	DDX23	100	82.439	Ictidomys_tridecemlineatus
ENSORLG00000012330	ddx23	92	87.381	ENSJJAG00000018994	Ddx23	100	81.951	Jaculus_jaculus
ENSORLG00000012330	ddx23	100	90.720	ENSKMAG00000012060	ddx23	97	95.909	Kryptolebias_marmoratus
ENSORLG00000012330	ddx23	100	91.089	ENSLBEG00000019475	ddx23	100	90.819	Labrus_bergylta
ENSORLG00000012330	ddx23	94	87.384	ENSLACG00000016977	DDX23	96	88.674	Latimeria_chalumnae
ENSORLG00000012330	ddx23	89	92.686	ENSLOCG00000007385	ddx23	100	88.264	Lepisosteus_oculatus
ENSORLG00000012330	ddx23	100	82.460	ENSLAFG00000014227	DDX23	100	82.073	Loxodonta_africana
ENSORLG00000012330	ddx23	100	82.948	ENSMFAG00000038666	DDX23	100	82.561	Macaca_fascicularis
ENSORLG00000012330	ddx23	100	82.948	ENSMMUG00000008432	DDX23	100	93.421	Macaca_mulatta
ENSORLG00000012330	ddx23	100	82.704	ENSMNEG00000040016	DDX23	100	82.317	Macaca_nemestrina
ENSORLG00000012330	ddx23	100	71.235	ENSMNEG00000045260	-	100	70.000	Macaca_nemestrina
ENSORLG00000012330	ddx23	100	70.864	ENSMLEG00000035096	-	100	69.963	Mandrillus_leucophaeus
ENSORLG00000012330	ddx23	100	82.948	ENSMLEG00000042846	DDX23	100	82.561	Mandrillus_leucophaeus
ENSORLG00000012330	ddx23	100	91.687	ENSMAMG00000024144	ddx23	100	92.432	Mastacembelus_armatus
ENSORLG00000012330	ddx23	100	91.067	ENSMZEG00005026086	ddx23	100	91.687	Maylandia_zebra
ENSORLG00000012330	ddx23	92	86.910	ENSMAUG00000012336	Ddx23	100	81.785	Mesocricetus_auratus
ENSORLG00000012330	ddx23	92	87.381	ENSMICG00000017541	DDX23	100	82.396	Microcebus_murinus
ENSORLG00000012330	ddx23	92	86.910	ENSMOCG00000018987	Ddx23	100	82.295	Microtus_ochrogaster
ENSORLG00000012330	ddx23	100	87.773	ENSMMOG00000012406	ddx23	100	87.130	Mola_mola
ENSORLG00000012330	ddx23	90	88.000	ENSMODG00000009975	DDX23	100	83.374	Monodelphis_domestica
ENSORLG00000012330	ddx23	100	92.910	ENSMALG00000022366	ddx23	100	92.910	Monopterus_albus
ENSORLG00000012330	ddx23	92	87.584	MGP_CAROLIEiJ_G0020240	Ddx23	100	82.173	Mus_caroli
ENSORLG00000012330	ddx23	92	87.449	ENSMUSG00000003360	Ddx23	100	82.051	Mus_musculus
ENSORLG00000012330	ddx23	91	87.517	MGP_PahariEiJ_G0020243	Ddx23	100	81.929	Mus_pahari
ENSORLG00000012330	ddx23	92	87.449	MGP_SPRETEiJ_G0021137	Ddx23	100	82.051	Mus_spretus
ENSORLG00000012330	ddx23	100	82.704	ENSMPUG00000014739	DDX23	100	82.317	Mustela_putorius_furo
ENSORLG00000012330	ddx23	100	83.394	ENSMLUG00000011033	-	100	82.641	Myotis_lucifugus
ENSORLG00000012330	ddx23	100	80.146	ENSMLUG00000003683	-	100	79.268	Myotis_lucifugus
ENSORLG00000012330	ddx23	100	82.909	ENSNGAG00000019018	Ddx23	100	82.439	Nannospalax_galili
ENSORLG00000012330	ddx23	100	88.010	ENSNBRG00000022928	ddx23	100	88.609	Neolamprologus_brichardi
ENSORLG00000012330	ddx23	100	76.248	ENSNLEG00000017864	DDX23	100	75.854	Nomascus_leucogenys
ENSORLG00000012330	ddx23	90	88.000	ENSMEUG00000009477	DDX23	100	83.496	Notamacropus_eugenii
ENSORLG00000012330	ddx23	100	79.512	ENSOPRG00000007170	-	100	82.396	Ochotona_princeps
ENSORLG00000012330	ddx23	100	83.191	ENSODEG00000003592	DDX23	100	82.173	Octodon_degus
ENSORLG00000012330	ddx23	100	91.315	ENSONIG00000017048	ddx23	100	91.935	Oreochromis_niloticus
ENSORLG00000012330	ddx23	100	82.704	ENSOCUG00000001414	DDX23	100	82.195	Oryctolagus_cuniculus
ENSORLG00000012330	ddx23	100	99.875	ENSORLG00020017586	ddx23	100	99.875	Oryzias_latipes_hni
ENSORLG00000012330	ddx23	100	92.149	ENSORLG00015012361	ddx23	100	92.021	Oryzias_latipes_hsok
ENSORLG00000012330	ddx23	100	96.030	ENSOMEG00000006453	ddx23	100	95.906	Oryzias_melastigma
ENSORLG00000012330	ddx23	100	82.704	ENSOGAG00000016813	DDX23	100	82.439	Otolemur_garnettii
ENSORLG00000012330	ddx23	100	82.948	ENSOARG00000019105	DDX23	90	82.073	Ovis_aries
ENSORLG00000012330	ddx23	100	62.469	ENSPPAG00000038775	-	81	67.020	Pan_paniscus
ENSORLG00000012330	ddx23	100	82.948	ENSPPAG00000037807	DDX23	100	93.421	Pan_paniscus
ENSORLG00000012330	ddx23	100	82.582	ENSPPRG00000015345	DDX23	100	82.195	Panthera_pardus
ENSORLG00000012330	ddx23	100	82.582	ENSPTIG00000018873	DDX23	100	82.195	Panthera_tigris_altaica
ENSORLG00000012330	ddx23	100	65.602	ENSPTRG00000051972	-	80	69.592	Pan_troglodytes
ENSORLG00000012330	ddx23	100	82.826	ENSPTRG00000004887	DDX23	100	93.421	Pan_troglodytes
ENSORLG00000012330	ddx23	90	83.735	ENSPANG00000035074	-	99	83.735	Papio_anubis
ENSORLG00000012330	ddx23	100	82.948	ENSPANG00000019459	DDX23	92	82.073	Papio_anubis
ENSORLG00000012330	ddx23	100	86.797	ENSPKIG00000024110	ddx23	100	87.286	Paramormyrops_kingsleyae
ENSORLG00000012330	ddx23	100	73.848	ENSPSIG00000002834	DDX23	100	74.010	Pelodiscus_sinensis
ENSORLG00000012330	ddx23	100	88.462	ENSPMGG00000010243	ddx23	100	90.000	Periophthalmus_magnuspinnatus
ENSORLG00000012330	ddx23	92	87.045	ENSPEMG00000011305	Ddx23	100	82.540	Peromyscus_maniculatus_bairdii
ENSORLG00000012330	ddx23	85	84.697	ENSPMAG00000008625	ddx23	91	84.435	Petromyzon_marinus
ENSORLG00000012330	ddx23	90	88.000	ENSPCIG00000027691	DDX23	100	83.496	Phascolarctos_cinereus
ENSORLG00000012330	ddx23	100	92.079	ENSPFOG00000012159	ddx23	100	90.718	Poecilia_formosa
ENSORLG00000012330	ddx23	100	92.298	ENSPLAG00000005052	ddx23	100	92.547	Poecilia_latipinna
ENSORLG00000012330	ddx23	100	92.298	ENSPMEG00000015385	ddx23	100	92.547	Poecilia_mexicana
ENSORLG00000012330	ddx23	100	92.308	ENSPREG00000007074	ddx23	100	92.308	Poecilia_reticulata
ENSORLG00000012330	ddx23	100	82.948	ENSPPYG00000004468	DDX23	97	82.561	Pongo_abelii
ENSORLG00000012330	ddx23	88	88.999	ENSPCAG00000002016	DDX23	83	91.202	Procavia_capensis
ENSORLG00000012330	ddx23	92	87.584	ENSPCOG00000025915	DDX23	100	93.421	Propithecus_coquereli
ENSORLG00000012330	ddx23	100	82.704	ENSPVAG00000009818	DDX23	100	82.317	Pteropus_vampyrus
ENSORLG00000012330	ddx23	100	87.089	ENSPNYG00000021038	ddx23	100	88.969	Pundamilia_nyererei
ENSORLG00000012330	ddx23	85	93.807	ENSPNAG00000019203	ddx23	99	84.852	Pygocentrus_nattereri
ENSORLG00000012330	ddx23	92	87.449	ENSRNOG00000060154	Ddx23	100	82.051	Rattus_norvegicus
ENSORLG00000012330	ddx23	100	70.545	ENSRBIG00000036337	-	88	78.152	Rhinopithecus_bieti
ENSORLG00000012330	ddx23	100	71.133	ENSRBIG00000040362	DDX23	100	70.260	Rhinopithecus_bieti
ENSORLG00000012330	ddx23	100	70.318	ENSRROG00000045747	-	89	78.152	Rhinopithecus_roxellana
ENSORLG00000012330	ddx23	100	82.948	ENSRROG00000028964	DDX23	100	82.561	Rhinopithecus_roxellana
ENSORLG00000012330	ddx23	74	36.842	YDR243C	-	81	38.476	Saccharomyces_cerevisiae
ENSORLG00000012330	ddx23	100	82.826	ENSSBOG00000025799	DDX23	100	81.951	Saimiri_boliviensis_boliviensis
ENSORLG00000012330	ddx23	90	88.000	ENSSHAG00000006590	DDX23	100	83.496	Sarcophilus_harrisii
ENSORLG00000012330	ddx23	90	91.862	ENSSFOG00015013273	ddx23	100	89.706	Scleropages_formosus
ENSORLG00000012330	ddx23	100	89.963	ENSSMAG00000000529	ddx23	100	89.963	Scophthalmus_maximus
ENSORLG00000012330	ddx23	100	92.060	ENSSDUG00000022459	ddx23	98	95.461	Seriola_dumerili
ENSORLG00000012330	ddx23	100	91.811	ENSSLDG00000010453	ddx23	100	91.811	Seriola_lalandi_dorsalis
ENSORLG00000012330	ddx23	85	93.593	ENSSARG00000004534	DDX23	92	93.593	Sorex_araneus
ENSORLG00000012330	ddx23	100	83.659	ENSSPUG00000016044	DDX23	96	84.586	Sphenodon_punctatus
ENSORLG00000012330	ddx23	100	91.935	ENSSPAG00000016482	ddx23	100	92.556	Stegastes_partitus
ENSORLG00000012330	ddx23	100	83.152	ENSSSCG00000000176	DDX23	100	82.439	Sus_scrofa
ENSORLG00000012330	ddx23	100	88.418	ENSTRUG00000000455	ddx23	100	87.547	Takifugu_rubripes
ENSORLG00000012330	ddx23	88	89.140	ENSTBEG00000016909	DDX23	83	91.202	Tupaia_belangeri
ENSORLG00000012330	ddx23	100	77.411	ENSTTRG00000004604	DDX23	100	76.773	Tursiops_truncatus
ENSORLG00000012330	ddx23	100	83.030	ENSUAMG00000027082	DDX23	100	82.317	Ursus_americanus
ENSORLG00000012330	ddx23	100	83.030	ENSUMAG00000006538	DDX23	100	82.317	Ursus_maritimus
ENSORLG00000012330	ddx23	100	82.582	ENSVVUG00000019648	DDX23	100	81.707	Vulpes_vulpes
ENSORLG00000012330	ddx23	100	79.238	ENSXETG00000009807	ddx23	100	79.115	Xenopus_tropicalis
ENSORLG00000012330	ddx23	100	89.027	ENSXCOG00000011648	ddx23	100	89.447	Xiphophorus_couchianus
ENSORLG00000012330	ddx23	100	92.432	ENSXMAG00000017387	ddx23	100	92.432	Xiphophorus_maculatus