EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000012576 (Gene tree)
Gene ID: 101161935
Gene Symbol: orla-b2m
Alias: -
Full Name: caprin family member 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 30747 bases
Position: chr23:11214633-11245379
Accession: 101161935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000015751	Caprin-1_C	PF12287.8	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000015661	-	1496	-	ENSORLP00000015660	198 (aa)	-	H2MAU9
ENSORLT00000015752	-	5045	XM_011491017	ENSORLP00000015751	883 (aa)	XP_011489319	H2MB34
ENSORLT00000027989	-	3900	XM_023952071	ENSORLP00000032443	116 (aa)	XP_023807839	Q90ZJ6

Gene Model

Click here to download ENSORLG00000012576's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012576	orla-b2m	79	65.432	ENSG00000110888	CAPRIN2	69	73.171	Homo_sapiens
ENSORLG00000012576	orla-b2m	96	62.288	ENSAPOG00000019808	caprin2	100	62.024	Acanthochromis_polyacanthus
ENSORLG00000012576	orla-b2m	92	47.685	ENSAMEG00000009118	CAPRIN2	73	47.685	Ailuropoda_melanoleuca
ENSORLG00000012576	orla-b2m	100	57.440	ENSACIG00000005589	caprin2	99	57.112	Amphilophus_citrinellus
ENSORLG00000012576	orla-b2m	100	64.484	ENSAOCG00000013014	caprin2	100	64.595	Amphiprion_ocellaris
ENSORLG00000012576	orla-b2m	100	39.881	ENSAPLG00000006703	CAPRIN2	90	39.736	Anas_platyrhynchos
ENSORLG00000012576	orla-b2m	90	48.341	ENSACAG00000012953	CAPRIN2	74	48.341	Anolis_carolinensis
ENSORLG00000012576	orla-b2m	90	48.341	ENSANAG00000035460	CAPRIN2	63	63.600	Aotus_nancymaae
ENSORLG00000012576	orla-b2m	100	64.739	ENSACLG00000015175	-	100	64.739	Astatotilapia_calliptera
ENSORLG00000012576	orla-b2m	100	45.575	ENSAMXG00000007266	caprin2	93	45.668	Astyanax_mexicanus
ENSORLG00000012576	orla-b2m	90	48.131	ENSBTAG00000019373	CAPRIN2	60	64.314	Bos_taurus
ENSORLG00000012576	orla-b2m	90	48.826	ENSCJAG00000001080	CAPRIN2	63	65.021	Callithrix_jacchus
ENSORLG00000012576	orla-b2m	91	47.685	ENSCAFG00000010713	CAPRIN2	75	47.685	Canis_familiaris
ENSORLG00000012576	orla-b2m	91	46.759	ENSCAFG00020018961	-	76	46.759	Canis_lupus_dingo
ENSORLG00000012576	orla-b2m	90	48.804	ENSCHIG00000026352	CAPRIN2	77	48.341	Capra_hircus
ENSORLG00000012576	orla-b2m	89	46.479	ENSCPOG00000006625	CAPRIN2	95	46.047	Cavia_porcellus
ENSORLG00000012576	orla-b2m	90	48.815	ENSCCAG00000027709	CAPRIN2	100	41.326	Cebus_capucinus
ENSORLG00000012576	orla-b2m	90	49.289	ENSCATG00000031463	CAPRIN2	100	41.682	Cercocebus_atys
ENSORLG00000012576	orla-b2m	84	47.907	ENSCLAG00000001513	CAPRIN2	93	47.907	Chinchilla_lanigera
ENSORLG00000012576	orla-b2m	90	49.289	ENSCSAG00000007446	CAPRIN2	75	49.289	Chlorocebus_sabaeus
ENSORLG00000012576	orla-b2m	90	42.991	ENSCHOG00000008931	CAPRIN2	72	42.991	Choloepus_hoffmanni
ENSORLG00000012576	orla-b2m	89	49.020	ENSCPBG00000027227	CAPRIN2	70	49.020	Chrysemys_picta_bellii
ENSORLG00000012576	orla-b2m	90	49.289	ENSCANG00000035343	CAPRIN2	60	65.844	Colobus_angolensis_palliatus
ENSORLG00000012576	orla-b2m	82	49.749	ENSCGRG00001002901	Caprin2	94	49.020	Cricetulus_griseus_chok1gshd
ENSORLG00000012576	orla-b2m	82	49.749	ENSCGRG00000001249	Caprin2	94	49.020	Cricetulus_griseus_crigri
ENSORLG00000012576	orla-b2m	100	45.648	ENSDARG00000020749	caprin2	95	46.162	Danio_rerio
ENSORLG00000012576	orla-b2m	78	44.737	ENSDORG00000012639	Caprin2	99	38.167	Dipodomys_ordii
ENSORLG00000012576	orla-b2m	90	47.664	ENSEASG00005005997	CAPRIN2	77	47.222	Equus_asinus_asinus
ENSORLG00000012576	orla-b2m	90	47.664	ENSECAG00000000608	CAPRIN2	60	64.400	Equus_caballus
ENSORLG00000012576	orla-b2m	96	47.755	ENSELUG00000019776	caprin2	95	47.864	Esox_lucius
ENSORLG00000012576	orla-b2m	67	64.400	ENSFCAG00000007004	CAPRIN2	55	64.400	Felis_catus
ENSORLG00000012576	orla-b2m	94	44.574	ENSFALG00000009038	CAPRIN2	70	50.251	Ficedula_albicollis
ENSORLG00000012576	orla-b2m	65	66.255	ENSFDAG00000020134	CAPRIN2	77	47.907	Fukomys_damarensis
ENSORLG00000012576	orla-b2m	100	64.057	ENSFHEG00000004435	caprin2	100	64.057	Fundulus_heteroclitus
ENSORLG00000012576	orla-b2m	98	41.956	ENSGALG00000012947	CAPRIN2	79	41.679	Gallus_gallus
ENSORLG00000012576	orla-b2m	96	66.705	ENSGAFG00000020084	caprin2	95	66.705	Gambusia_affinis
ENSORLG00000012576	orla-b2m	96	57.079	ENSGACG00000019233	caprin2	95	57.079	Gasterosteus_aculeatus
ENSORLG00000012576	orla-b2m	89	49.020	ENSGAGG00000015057	CAPRIN2	67	49.020	Gopherus_agassizii
ENSORLG00000012576	orla-b2m	71	64.000	ENSGGOG00000006182	CAPRIN2	58	65.432	Gorilla_gorilla
ENSORLG00000012576	orla-b2m	100	62.786	ENSHBUG00000012107	-	100	62.786	Haplochromis_burtoni
ENSORLG00000012576	orla-b2m	84	48.372	ENSHGLG00000007117	CAPRIN2	94	48.372	Heterocephalus_glaber_female
ENSORLG00000012576	orla-b2m	100	42.741	ENSIPUG00000016517	caprin2	95	43.301	Ictalurus_punctatus
ENSORLG00000012576	orla-b2m	92	48.341	ENSSTOG00000004672	CAPRIN2	75	46.637	Ictidomys_tridecemlineatus
ENSORLG00000012576	orla-b2m	84	48.804	ENSJJAG00000018136	Caprin2	95	47.085	Jaculus_jaculus
ENSORLG00000012576	orla-b2m	100	57.797	ENSKMAG00000011810	caprin2	96	58.924	Kryptolebias_marmoratus
ENSORLG00000012576	orla-b2m	100	63.496	ENSLBEG00000028194	caprin2	100	63.135	Labrus_bergylta
ENSORLG00000012576	orla-b2m	100	37.476	ENSLACG00000006297	CAPRIN2	97	38.501	Latimeria_chalumnae
ENSORLG00000012576	orla-b2m	68	66.667	ENSLOCG00000015099	caprin2	76	66.393	Lepisosteus_oculatus
ENSORLG00000012576	orla-b2m	80	49.749	ENSLAFG00000012893	CAPRIN2	70	48.357	Loxodonta_africana
ENSORLG00000012576	orla-b2m	90	49.289	ENSMFAG00000025167	CAPRIN2	71	49.289	Macaca_fascicularis
ENSORLG00000012576	orla-b2m	73	65.432	ENSMMUG00000001359	CAPRIN2	60	65.432	Macaca_mulatta
ENSORLG00000012576	orla-b2m	90	49.289	ENSMNEG00000029750	CAPRIN2	100	41.865	Macaca_nemestrina
ENSORLG00000012576	orla-b2m	71	70.046	ENSMLEG00000034760	CAPRIN2	58	70.046	Mandrillus_leucophaeus
ENSORLG00000012576	orla-b2m	100	62.352	ENSMAMG00000023305	caprin2	100	62.352	Mastacembelus_armatus
ENSORLG00000012576	orla-b2m	100	64.516	ENSMZEG00005008191	-	100	64.516	Maylandia_zebra
ENSORLG00000012576	orla-b2m	93	40.945	ENSMGAG00000013350	CAPRIN2	83	41.150	Meleagris_gallopavo
ENSORLG00000012576	orla-b2m	51	62.357	ENSMAUG00000008195	Caprin2	94	49.749	Mesocricetus_auratus
ENSORLG00000012576	orla-b2m	89	50.254	ENSMICG00000010650	CAPRIN2	100	41.209	Microcebus_murinus
ENSORLG00000012576	orla-b2m	79	51.256	ENSMOCG00000001842	Caprin2	70	50.490	Microtus_ochrogaster
ENSORLG00000012576	orla-b2m	79	48.804	ENSMODG00000012642	-	68	47.222	Monodelphis_domestica
ENSORLG00000012576	orla-b2m	100	58.963	ENSMALG00000020970	caprin2	100	58.963	Monopterus_albus
ENSORLG00000012576	orla-b2m	86	40.692	MGP_CAROLIEiJ_G0029073	Caprin2	92	41.919	Mus_caroli
ENSORLG00000012576	orla-b2m	86	45.415	ENSMUSG00000030309	Caprin2	92	49.749	Mus_musculus
ENSORLG00000012576	orla-b2m	86	44.978	MGP_PahariEiJ_G0022834	Caprin2	92	49.246	Mus_pahari
ENSORLG00000012576	orla-b2m	86	45.852	MGP_SPRETEiJ_G0030128	Caprin2	92	50.251	Mus_spretus
ENSORLG00000012576	orla-b2m	90	48.131	ENSMPUG00000011164	CAPRIN2	73	47.685	Mustela_putorius_furo
ENSORLG00000012576	orla-b2m	91	49.074	ENSMLUG00000008734	CAPRIN2	74	49.074	Myotis_lucifugus
ENSORLG00000012576	orla-b2m	81	48.815	ENSNLEG00000005730	CAPRIN2	53	65.432	Nomascus_leucogenys
ENSORLG00000012576	orla-b2m	73	49.020	ENSMEUG00000009176	CAPRIN2	63	49.020	Notamacropus_eugenii
ENSORLG00000012576	orla-b2m	56	66.000	ENSOPRG00000011491	CAPRIN2	64	66.667	Ochotona_princeps
ENSORLG00000012576	orla-b2m	82	46.903	ENSODEG00000005454	CAPRIN2	72	46.903	Octodon_degus
ENSORLG00000012576	orla-b2m	100	62.364	ENSONIG00000012027	caprin2	100	62.364	Oreochromis_niloticus
ENSORLG00000012576	orla-b2m	92	46.460	ENSOCUG00000017805	CAPRIN2	83	40.845	Oryctolagus_cuniculus
ENSORLG00000012576	orla-b2m	92	40.000	ENSOGAG00000010071	CAPRIN2	74	40.000	Otolemur_garnettii
ENSORLG00000012576	orla-b2m	90	48.131	ENSOARG00000019503	CAPRIN2	71	47.685	Ovis_aries
ENSORLG00000012576	orla-b2m	90	49.289	ENSPPAG00000041410	CAPRIN2	60	65.432	Pan_paniscus
ENSORLG00000012576	orla-b2m	67	64.400	ENSPPRG00000013738	CAPRIN2	56	64.400	Panthera_pardus
ENSORLG00000012576	orla-b2m	67	64.400	ENSPTIG00000013003	CAPRIN2	56	64.400	Panthera_tigris_altaica
ENSORLG00000012576	orla-b2m	90	49.289	ENSPTRG00000004802	CAPRIN2	77	49.289	Pan_troglodytes
ENSORLG00000012576	orla-b2m	90	49.289	ENSPANG00000005858	CAPRIN2	60	65.432	Papio_anubis
ENSORLG00000012576	orla-b2m	98	43.952	ENSPKIG00000017980	caprin2	95	44.793	Paramormyrops_kingsleyae
ENSORLG00000012576	orla-b2m	90	49.029	ENSPSIG00000016188	CAPRIN2	75	49.029	Pelodiscus_sinensis
ENSORLG00000012576	orla-b2m	61	49.749	ENSPEMG00000006778	Caprin2	94	49.749	Peromyscus_maniculatus_bairdii
ENSORLG00000012576	orla-b2m	80	49.020	ENSPCIG00000015197	CAPRIN2	67	49.020	Phascolarctos_cinereus
ENSORLG00000012576	orla-b2m	75	59.644	ENSPFOG00000009034	caprin2	93	59.644	Poecilia_formosa
ENSORLG00000012576	orla-b2m	95	66.628	ENSPMEG00000020786	caprin2	95	66.628	Poecilia_mexicana
ENSORLG00000012576	orla-b2m	90	49.289	ENSPPYG00000004394	CAPRIN2	71	49.289	Pongo_abelii
ENSORLG00000012576	orla-b2m	71	70.046	ENSPCOG00000024022	CAPRIN2	58	70.046	Propithecus_coquereli
ENSORLG00000012576	orla-b2m	82	56.000	ENSPVAG00000006083	CAPRIN2	65	50.000	Pteropus_vampyrus
ENSORLG00000012576	orla-b2m	100	43.776	ENSPNAG00000017781	caprin2	99	44.388	Pygocentrus_nattereri
ENSORLG00000012576	orla-b2m	83	50.251	ENSRNOG00000047319	Caprin2	92	50.251	Rattus_norvegicus
ENSORLG00000012576	orla-b2m	90	45.024	ENSRBIG00000033178	CAPRIN2	100	40.917	Rhinopithecus_bieti
ENSORLG00000012576	orla-b2m	61	64.000	ENSRROG00000033123	CAPRIN2	59	64.000	Rhinopithecus_roxellana
ENSORLG00000012576	orla-b2m	90	48.815	ENSSBOG00000028650	CAPRIN2	63	63.600	Saimiri_boliviensis_boliviensis
ENSORLG00000012576	orla-b2m	80	48.039	ENSSHAG00000004287	CAPRIN2	68	48.039	Sarcophilus_harrisii
ENSORLG00000012576	orla-b2m	50	47.887	ENSSFOG00015022679	caprin2	95	47.887	Scleropages_formosus
ENSORLG00000012576	orla-b2m	100	61.329	ENSSMAG00000016174	caprin2	95	63.532	Scophthalmus_maximus
ENSORLG00000012576	orla-b2m	92	66.429	ENSSDUG00000019919	caprin2	95	66.307	Seriola_dumerili
ENSORLG00000012576	orla-b2m	90	47.907	ENSSSCG00000022611	CAPRIN2	75	47.907	Sus_scrofa
ENSORLG00000012576	orla-b2m	94	44.444	ENSTGUG00000011456	-	73	50.251	Taeniopygia_guttata
ENSORLG00000012576	orla-b2m	55	40.850	ENSUAMG00000012343	-	100	40.850	Ursus_americanus
ENSORLG00000012576	orla-b2m	92	48.131	ENSUMAG00000002576	CAPRIN2	64	64.000	Ursus_maritimus
ENSORLG00000012576	orla-b2m	90	48.148	ENSVPAG00000007238	CAPRIN2	75	48.148	Vicugna_pacos
ENSORLG00000012576	orla-b2m	91	47.685	ENSVVUG00000007217	CAPRIN2	53	64.400	Vulpes_vulpes
ENSORLG00000012576	orla-b2m	80	46.500	ENSXETG00000007516	caprin2	78	46.602	Xenopus_tropicalis