EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000012581 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 639 bases
Position: chr16:20455675-20456313
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000015756	zf-C2H2	PF00096.26	4.8e-16	1	3
ENSORLP00000015756	zf-C2H2	PF00096.26	4.8e-16	2	3
ENSORLP00000015756	zf-C2H2	PF00096.26	4.8e-16	3	3
ENSORLP00000015756	zf-met	PF12874.7	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000015757	-	639	-	ENSORLP00000015756	212 (aa)	-	H2MB39

Gene Model

Click here to download ENSORLG00000012581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000012581	-	69	41.860	ENSORLG00000025576	-	90	41.489
ENSORLG00000012581	-	92	49.206	ENSORLG00000027186	-	84	51.724
ENSORLG00000012581	-	70	35.971	ENSORLG00000024789	-	58	35.971
ENSORLG00000012581	-	57	48.780	ENSORLG00000024896	-	52	48.780
ENSORLG00000012581	-	52	44.706	ENSORLG00000030655	-	63	44.706
ENSORLG00000012581	-	78	48.235	ENSORLG00000029896	-	93	48.235
ENSORLG00000012581	-	83	47.059	ENSORLG00000027822	-	94	44.318
ENSORLG00000012581	-	67	44.706	ENSORLG00000028381	-	97	46.154
ENSORLG00000012581	-	95	46.479	ENSORLG00000001749	-	94	45.882
ENSORLG00000012581	-	61	54.237	ENSORLG00000007032	-	89	54.237
ENSORLG00000012581	-	61	45.783	ENSORLG00000028091	-	84	45.783
ENSORLG00000012581	-	78	47.541	ENSORLG00000022187	-	76	47.541
ENSORLG00000012581	-	81	42.500	ENSORLG00000028168	-	98	42.500
ENSORLG00000012581	-	62	42.708	ENSORLG00000029994	-	91	42.708
ENSORLG00000012581	-	60	41.250	ENSORLG00000026568	-	54	41.250
ENSORLG00000012581	-	70	44.737	ENSORLG00000022502	-	81	44.737
ENSORLG00000012581	-	53	46.341	ENSORLG00000000557	-	77	46.341
ENSORLG00000012581	-	69	45.882	ENSORLG00000030630	-	82	45.882
ENSORLG00000012581	-	67	40.698	ENSORLG00000027767	-	96	40.698
ENSORLG00000012581	-	78	48.235	ENSORLG00000023086	-	95	48.235
ENSORLG00000012581	-	56	43.182	ENSORLG00000022350	-	63	43.182
ENSORLG00000012581	-	69	48.148	ENSORLG00000027271	-	89	48.148
ENSORLG00000012581	-	66	48.148	ENSORLG00000000420	-	97	48.148
ENSORLG00000012581	-	86	50.588	ENSORLG00000027575	-	74	50.588
ENSORLG00000012581	-	99	44.706	ENSORLG00000007263	-	89	44.706
ENSORLG00000012581	-	66	44.706	ENSORLG00000024399	-	98	44.706
ENSORLG00000012581	-	64	45.455	ENSORLG00000016247	prdm5	63	45.455
ENSORLG00000012581	-	83	47.191	ENSORLG00000027974	-	97	47.191
ENSORLG00000012581	-	67	49.412	ENSORLG00000000191	-	88	49.412
ENSORLG00000012581	-	54	45.977	ENSORLG00000006966	-	93	45.977
ENSORLG00000012581	-	58	48.718	ENSORLG00000023809	-	68	48.718
ENSORLG00000012581	-	54	48.235	ENSORLG00000023806	-	91	48.235
ENSORLG00000012581	-	50	49.412	ENSORLG00000000262	-	77	49.412
ENSORLG00000012581	-	52	41.538	ENSORLG00000023094	-	55	41.538
ENSORLG00000012581	-	50	40.404	ENSORLG00000027009	-	79	40.404
ENSORLG00000012581	-	75	41.667	ENSORLG00000013863	-	93	41.667
ENSORLG00000012581	-	56	50.588	ENSORLG00000026520	-	91	50.588
ENSORLG00000012581	-	78	43.243	ENSORLG00000025080	-	94	43.243
ENSORLG00000012581	-	67	44.444	ENSORLG00000026684	-	68	44.444
ENSORLG00000012581	-	90	48.235	ENSORLG00000023744	-	90	48.235
ENSORLG00000012581	-	77	41.176	ENSORLG00000005060	GFI1	53	41.176
ENSORLG00000012581	-	88	48.718	ENSORLG00000027303	-	92	48.718
ENSORLG00000012581	-	51	47.458	ENSORLG00000027765	-	61	47.458
ENSORLG00000012581	-	52	49.412	ENSORLG00000028567	-	78	49.412
ENSORLG00000012581	-	92	42.697	ENSORLG00000029027	-	98	52.941
ENSORLG00000012581	-	76	48.750	ENSORLG00000028433	-	97	48.750
ENSORLG00000012581	-	90	48.235	ENSORLG00000024174	-	87	56.098
ENSORLG00000012581	-	69	49.412	ENSORLG00000024652	-	99	47.059
ENSORLG00000012581	-	96	52.222	ENSORLG00000025719	-	63	52.222
ENSORLG00000012581	-	84	45.882	ENSORLG00000007009	-	98	45.882
ENSORLG00000012581	-	75	54.412	ENSORLG00000028323	-	99	54.412
ENSORLG00000012581	-	67	41.176	ENSORLG00000002268	-	60	43.243
ENSORLG00000012581	-	51	51.765	ENSORLG00000023828	-	52	51.765
ENSORLG00000012581	-	70	47.436	ENSORLG00000000253	-	97	47.436
ENSORLG00000012581	-	80	42.000	ENSORLG00000017475	snai2	70	42.000
ENSORLG00000012581	-	58	45.882	ENSORLG00000021951	-	57	45.882
ENSORLG00000012581	-	78	50.588	ENSORLG00000029172	-	87	50.588
ENSORLG00000012581	-	67	44.706	ENSORLG00000023497	-	57	44.706
ENSORLG00000012581	-	51	43.529	ENSORLG00000016981	-	85	42.000
ENSORLG00000012581	-	74	51.471	ENSORLG00000028456	-	95	51.471
ENSORLG00000012581	-	62	33.871	ENSORLG00000024183	-	79	33.628
ENSORLG00000012581	-	65	48.235	ENSORLG00000001796	-	90	48.235
ENSORLG00000012581	-	89	49.367	ENSORLG00000007097	-	99	49.412
ENSORLG00000012581	-	89	47.500	ENSORLG00000027982	-	97	45.902
ENSORLG00000012581	-	52	39.773	ENSORLG00000001615	-	62	44.000
ENSORLG00000012581	-	76	49.412	ENSORLG00000026852	-	77	49.412
ENSORLG00000012581	-	79	44.444	ENSORLG00000012485	-	51	47.500
ENSORLG00000012581	-	77	44.304	ENSORLG00000025380	-	71	45.455
ENSORLG00000012581	-	65	41.860	ENSORLG00000002307	-	85	44.706
ENSORLG00000012581	-	66	36.782	ENSORLG00000009152	zbtb41	66	36.782
ENSORLG00000012581	-	72	44.706	ENSORLG00000022699	-	94	44.706
ENSORLG00000012581	-	91	44.304	ENSORLG00000010117	-	86	44.304
ENSORLG00000012581	-	54	44.340	ENSORLG00000019331	zbtb48	58	44.340
ENSORLG00000012581	-	63	45.977	ENSORLG00000027967	-	81	45.977
ENSORLG00000012581	-	51	46.512	ENSORLG00000011040	-	86	46.512
ENSORLG00000012581	-	78	46.512	ENSORLG00000022677	-	79	47.059
ENSORLG00000012581	-	98	45.882	ENSORLG00000025717	-	96	45.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012581	-	52	43.820	ENSAPOG00000023008	-	54	44.156	Acanthochromis_polyacanthus
ENSORLG00000012581	-	73	39.175	ENSACIG00000022738	-	94	40.909	Amphilophus_citrinellus
ENSORLG00000012581	-	68	47.170	ENSACIG00000007096	-	68	47.170	Amphilophus_citrinellus
ENSORLG00000012581	-	52	45.455	ENSAOCG00000016409	-	59	45.455	Amphiprion_ocellaris
ENSORLG00000012581	-	52	45.588	ENSAPEG00000009553	-	50	45.588	Amphiprion_percula
ENSORLG00000012581	-	52	45.455	ENSAPEG00000008746	-	59	45.455	Amphiprion_percula
ENSORLG00000012581	-	52	46.591	ENSATEG00000015238	-	53	46.591	Anabas_testudineus
ENSORLG00000012581	-	68	47.059	ENSATEG00000014684	-	88	50.000	Anabas_testudineus
ENSORLG00000012581	-	85	68.132	ENSATEG00000021056	-	77	62.802	Anabas_testudineus
ENSORLG00000012581	-	75	50.943	ENSATEG00000021602	-	85	50.943	Anabas_testudineus
ENSORLG00000012581	-	53	52.174	ENSATEG00000022064	-	91	51.190	Anabas_testudineus
ENSORLG00000012581	-	52	39.091	ENSACLG00000008374	-	52	39.091	Astatotilapia_calliptera
ENSORLG00000012581	-	53	40.260	ENSACLG00000018716	-	79	40.260	Astatotilapia_calliptera
ENSORLG00000012581	-	88	46.429	ENSACLG00000019349	-	66	46.429	Astatotilapia_calliptera
ENSORLG00000012581	-	67	45.098	ENSACLG00000014365	-	90	43.548	Astatotilapia_calliptera
ENSORLG00000012581	-	56	49.091	ENSACLG00000022482	-	78	49.091	Astatotilapia_calliptera
ENSORLG00000012581	-	56	44.444	ENSAMXG00000007973	-	92	42.308	Astyanax_mexicanus
ENSORLG00000012581	-	79	83.696	ENSCSEG00000019848	-	82	83.696	Cynoglossus_semilaevis
ENSORLG00000012581	-	76	41.509	ENSCVAG00000020968	-	52	41.509	Cyprinodon_variegatus
ENSORLG00000012581	-	85	45.679	ENSCVAG00000019097	-	66	45.679	Cyprinodon_variegatus
ENSORLG00000012581	-	61	37.179	ENSCVAG00000021152	-	80	37.179	Cyprinodon_variegatus
ENSORLG00000012581	-	62	46.753	ENSFHEG00000007985	-	73	46.753	Fundulus_heteroclitus
ENSORLG00000012581	-	53	45.679	ENSFHEG00000003460	-	54	45.679	Fundulus_heteroclitus
ENSORLG00000012581	-	63	46.914	ENSGAFG00000001481	-	75	46.914	Gambusia_affinis
ENSORLG00000012581	-	63	45.000	ENSGAGG00000015232	-	66	45.000	Gopherus_agassizii
ENSORLG00000012581	-	62	42.308	ENSHBUG00000020527	-	84	42.308	Haplochromis_burtoni
ENSORLG00000012581	-	52	36.697	ENSHBUG00000017924	-	52	36.697	Haplochromis_burtoni
ENSORLG00000012581	-	96	57.269	ENSKMAG00000008200	-	78	57.709	Kryptolebias_marmoratus
ENSORLG00000012581	-	50	44.318	ENSKMAG00000015304	-	55	44.318	Kryptolebias_marmoratus
ENSORLG00000012581	-	53	43.396	ENSKMAG00000000802	-	74	43.396	Kryptolebias_marmoratus
ENSORLG00000012581	-	90	48.718	ENSLBEG00000026457	-	95	48.718	Labrus_bergylta
ENSORLG00000012581	-	54	44.706	ENSLOCG00000017422	-	69	44.706	Lepisosteus_oculatus
ENSORLG00000012581	-	57	45.455	ENSMAMG00000010902	-	58	45.455	Mastacembelus_armatus
ENSORLG00000012581	-	79	45.283	ENSMZEG00005022884	-	96	45.283	Maylandia_zebra
ENSORLG00000012581	-	58	45.455	ENSMZEG00005020568	-	75	45.455	Maylandia_zebra
ENSORLG00000012581	-	52	39.091	ENSMZEG00005011431	-	76	46.774	Maylandia_zebra
ENSORLG00000012581	-	62	46.970	ENSMZEG00005025725	-	93	46.970	Maylandia_zebra
ENSORLG00000012581	-	62	46.774	ENSMZEG00005028563	-	81	46.774	Maylandia_zebra
ENSORLG00000012581	-	56	42.857	ENSMZEG00005012676	-	83	42.857	Maylandia_zebra
ENSORLG00000012581	-	67	46.970	ENSMZEG00005025125	-	96	46.970	Maylandia_zebra
ENSORLG00000012581	-	57	44.156	ENSMZEG00005027551	-	87	44.156	Maylandia_zebra
ENSORLG00000012581	-	66	42.647	ENSMZEG00005023565	-	61	46.341	Maylandia_zebra
ENSORLG00000012581	-	87	32.086	ENSMMOG00000005437	-	60	33.508	Mola_mola
ENSORLG00000012581	-	68	46.591	ENSMMOG00000009252	-	64	46.591	Mola_mola
ENSORLG00000012581	-	67	43.182	ENSMALG00000011756	-	59	43.182	Monopterus_albus
ENSORLG00000012581	-	52	48.148	ENSMALG00000010959	-	88	47.561	Monopterus_albus
ENSORLG00000012581	-	54	41.026	ENSNBRG00000004792	-	54	41.026	Neolamprologus_brichardi
ENSORLG00000012581	-	58	43.878	ENSONIG00000012374	-	99	43.878	Oreochromis_niloticus
ENSORLG00000012581	-	74	45.455	ENSONIG00000008297	-	92	46.753	Oreochromis_niloticus
ENSORLG00000012581	-	69	46.753	ENSOMEG00000015179	-	58	46.753	Oryzias_melastigma
ENSORLG00000012581	-	50	46.835	ENSPKIG00000015951	-	54	46.835	Paramormyrops_kingsleyae
ENSORLG00000012581	-	63	42.222	ENSPMGG00000020606	-	88	42.222	Periophthalmus_magnuspinnatus
ENSORLG00000012581	-	59	41.237	ENSPMGG00000008518	-	84	41.237	Periophthalmus_magnuspinnatus
ENSORLG00000012581	-	83	46.914	ENSPFOG00000000667	-	78	46.914	Poecilia_formosa
ENSORLG00000012581	-	50	43.529	ENSPFOG00000018771	-	52	43.529	Poecilia_formosa
ENSORLG00000012581	-	74	44.706	ENSPLAG00000005106	-	86	44.706	Poecilia_latipinna
ENSORLG00000012581	-	70	46.914	ENSPLAG00000013745	-	87	40.789	Poecilia_latipinna
ENSORLG00000012581	-	50	42.708	ENSPMEG00000022651	-	54	42.708	Poecilia_mexicana
ENSORLG00000012581	-	59	44.156	ENSPNYG00000003834	-	81	44.156	Pundamilia_nyererei
ENSORLG00000012581	-	52	36.697	ENSPNYG00000016157	-	52	36.697	Pundamilia_nyererei
ENSORLG00000012581	-	53	42.857	ENSPNYG00000020737	-	75	42.857	Pundamilia_nyererei
ENSORLG00000012581	-	62	40.659	ENSPNAG00000011705	-	51	40.659	Pygocentrus_nattereri
ENSORLG00000012581	-	59	47.059	ENSSFOG00015006083	-	56	47.059	Scleropages_formosus
ENSORLG00000012581	-	83	46.250	ENSSMAG00000006902	-	79	46.250	Scophthalmus_maximus
ENSORLG00000012581	-	77	47.619	ENSSMAG00000006155	-	81	47.619	Scophthalmus_maximus
ENSORLG00000012581	-	98	44.318	ENSSMAG00000013828	-	76	44.318	Scophthalmus_maximus
ENSORLG00000012581	-	56	45.312	ENSSMAG00000013663	-	85	47.170	Scophthalmus_maximus
ENSORLG00000012581	-	52	49.180	ENSSDUG00000023764	-	90	49.180	Seriola_dumerili
ENSORLG00000012581	-	52	44.872	ENSSDUG00000015013	-	59	44.872	Seriola_dumerili
ENSORLG00000012581	-	52	44.872	ENSSLDG00000021278	-	59	44.872	Seriola_lalandi_dorsalis
ENSORLG00000012581	-	79	42.353	ENSSPAG00000007691	-	94	42.353	Stegastes_partitus
ENSORLG00000012581	-	53	45.455	ENSSPAG00000007403	-	86	45.455	Stegastes_partitus
ENSORLG00000012581	-	71	46.154	ENSSPAG00000008950	-	61	46.154	Stegastes_partitus
ENSORLG00000012581	-	52	54.717	ENSTRUG00000023491	-	59	54.717	Takifugu_rubripes
ENSORLG00000012581	-	75	64.242	ENSTRUG00000023354	-	59	63.529	Takifugu_rubripes
ENSORLG00000012581	-	61	44.706	ENSTNIG00000002344	-	85	44.706	Tetraodon_nigroviridis
ENSORLG00000012581	-	54	42.708	ENSXMAG00000024973	-	61	42.708	Xiphophorus_maculatus