EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000012609 (Gene tree)
Gene ID: 101166907
Gene Symbol: toe1
Alias: -
Full Name: target of EGR1%2C exonuclease
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 12127 bases
Position: chr17:19161207-19173333
Accession: 101166907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000041910	zf-CCCH	PF00642.24	0.00046	1	1
ENSORLP00000015792	zf-CCCH	PF00642.24	0.00048	1	1
ENSORLP00000041910	CAF1	PF04857.20	8.7e-88	1	2
ENSORLP00000041910	CAF1	PF04857.20	8.7e-88	2	2
ENSORLP00000015792	CAF1	PF04857.20	9.4e-88	1	2
ENSORLP00000015792	CAF1	PF04857.20	9.4e-88	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000015793	-	1557	-	ENSORLP00000015792	518 (aa)	-	H2MB71
ENSORLT00000032041	-	1793	XM_011486573	ENSORLP00000041910	508 (aa)	XP_011484875	UPI0005CC1995

Gene Model

Click here to download ENSORLG00000012609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012609	toe1	97	50.397	ENSG00000132773	TOE1	94	50.685	Homo_sapiens
ENSORLG00000012609	toe1	100	72.901	ENSAPOG00000010450	toe1	100	72.901	Acanthochromis_polyacanthus
ENSORLG00000012609	toe1	97	50.398	ENSAMEG00000013576	TOE1	93	50.688	Ailuropoda_melanoleuca
ENSORLG00000012609	toe1	100	71.815	ENSACIG00000004175	toe1	99	71.815	Amphilophus_citrinellus
ENSORLG00000012609	toe1	100	70.522	ENSAOCG00000022922	toe1	100	73.019	Amphiprion_ocellaris
ENSORLG00000012609	toe1	100	70.709	ENSAPEG00000005572	toe1	100	73.208	Amphiprion_percula
ENSORLG00000012609	toe1	100	70.363	ENSATEG00000008973	toe1	100	70.554	Anabas_testudineus
ENSORLG00000012609	toe1	98	47.145	ENSACAG00000015161	TOE1	96	47.681	Anolis_carolinensis
ENSORLG00000012609	toe1	99	49.605	ENSANAG00000023815	-	85	68.349	Aotus_nancymaae
ENSORLG00000012609	toe1	99	42.857	ENSANAG00000032328	-	85	54.222	Aotus_nancymaae
ENSORLG00000012609	toe1	99	73.684	ENSACLG00000021437	toe1	99	73.872	Astatotilapia_calliptera
ENSORLG00000012609	toe1	99	58.333	ENSAMXG00000031029	toe1	97	58.140	Astyanax_mexicanus
ENSORLG00000012609	toe1	97	49.803	ENSBTAG00000011243	TOE1	94	49.421	Bos_taurus
ENSORLG00000012609	toe1	64	34.682	WBGene00013265	parn-2	62	36.508	Caenorhabditis_elegans
ENSORLG00000012609	toe1	99	49.802	ENSCJAG00000004716	TOE1	94	49.802	Callithrix_jacchus
ENSORLG00000012609	toe1	97	50.099	ENSCAFG00000004603	TOE1	94	49.414	Canis_familiaris
ENSORLG00000012609	toe1	97	50.099	ENSCAFG00020016716	TOE1	94	49.414	Canis_lupus_dingo
ENSORLG00000012609	toe1	97	50.398	ENSCHIG00000026678	TOE1	94	50.194	Capra_hircus
ENSORLG00000012609	toe1	97	50.099	ENSTSYG00000011320	TOE1	85	70.183	Carlito_syrichta
ENSORLG00000012609	toe1	74	45.573	ENSCAPG00000003952	TOE1	100	44.301	Cavia_aperea
ENSORLG00000012609	toe1	99	51.468	ENSCPOG00000036595	TOE1	94	50.487	Cavia_porcellus
ENSORLG00000012609	toe1	99	49.706	ENSCCAG00000030245	TOE1	85	69.266	Cebus_capucinus
ENSORLG00000012609	toe1	97	50.800	ENSCATG00000038458	TOE1	86	69.266	Cercocebus_atys
ENSORLG00000012609	toe1	99	50.098	ENSCLAG00000003906	TOE1	94	49.611	Chinchilla_lanigera
ENSORLG00000012609	toe1	97	50.800	ENSCSAG00000001213	TOE1	94	51.186	Chlorocebus_sabaeus
ENSORLG00000012609	toe1	99	49.609	ENSCHOG00000004270	TOE1	94	48.928	Choloepus_hoffmanni
ENSORLG00000012609	toe1	98	48.050	ENSCPBG00000005398	TOE1	78	66.000	Chrysemys_picta_bellii
ENSORLG00000012609	toe1	74	46.102	ENSCING00000003872	-	88	46.102	Ciona_intestinalis
ENSORLG00000012609	toe1	79	45.085	ENSCSAVG00000004594	-	98	34.055	Ciona_savignyi
ENSORLG00000012609	toe1	97	50.898	ENSCANG00000037540	TOE1	94	51.282	Colobus_angolensis_palliatus
ENSORLG00000012609	toe1	99	50.098	ENSCGRG00001022323	Toe1	94	50.098	Cricetulus_griseus_chok1gshd
ENSORLG00000012609	toe1	99	50.098	ENSCGRG00000004377	Toe1	94	50.098	Cricetulus_griseus_crigri
ENSORLG00000012609	toe1	100	66.917	ENSCSEG00000021445	toe1	100	68.985	Cynoglossus_semilaevis
ENSORLG00000012609	toe1	99	72.374	ENSCVAG00000006577	toe1	99	73.735	Cyprinodon_variegatus
ENSORLG00000012609	toe1	100	58.594	ENSDARG00000077544	toe1	98	58.594	Danio_rerio
ENSORLG00000012609	toe1	99	50.791	ENSDNOG00000015596	TOE1	91	50.791	Dasypus_novemcinctus
ENSORLG00000012609	toe1	97	50.100	ENSDORG00000007153	Toe1	94	49.216	Dipodomys_ordii
ENSORLG00000012609	toe1	99	49.222	ENSETEG00000013367	TOE1	97	49.222	Echinops_telfairi
ENSORLG00000012609	toe1	92	33.474	ENSEBUG00000000655	toe1	59	42.751	Eptatretus_burgeri
ENSORLG00000012609	toe1	92	48.954	ENSEASG00005004198	TOE1	88	48.117	Equus_asinus_asinus
ENSORLG00000012609	toe1	97	50.298	ENSECAG00000023204	TOE1	94	49.804	Equus_caballus
ENSORLG00000012609	toe1	99	51.479	ENSEEUG00000015402	TOE1	94	50.988	Erinaceus_europaeus
ENSORLG00000012609	toe1	99	57.824	ENSELUG00000012307	toe1	97	57.656	Esox_lucius
ENSORLG00000012609	toe1	97	49.901	ENSFCAG00000038191	TOE1	94	49.219	Felis_catus
ENSORLG00000012609	toe1	90	44.950	ENSFALG00000005017	TOE1	99	45.850	Ficedula_albicollis
ENSORLG00000012609	toe1	97	49.901	ENSFDAG00000019031	TOE1	93	49.903	Fukomys_damarensis
ENSORLG00000012609	toe1	100	70.115	ENSFHEG00000021893	toe1	100	69.732	Fundulus_heteroclitus
ENSORLG00000012609	toe1	75	81.967	ENSGMOG00000004656	toe1	100	61.386	Gadus_morhua
ENSORLG00000012609	toe1	98	47.850	ENSGALG00000010228	TOE1	99	47.664	Gallus_gallus
ENSORLG00000012609	toe1	100	73.152	ENSGAFG00000013948	toe1	100	72.179	Gambusia_affinis
ENSORLG00000012609	toe1	99	66.403	ENSGACG00000014339	toe1	91	79.211	Gasterosteus_aculeatus
ENSORLG00000012609	toe1	98	48.214	ENSGAGG00000023228	TOE1	85	66.221	Gopherus_agassizii
ENSORLG00000012609	toe1	97	50.198	ENSGGOG00000003290	TOE1	85	69.266	Gorilla_gorilla
ENSORLG00000012609	toe1	99	73.496	ENSHBUG00000012101	toe1	99	73.496	Haplochromis_burtoni
ENSORLG00000012609	toe1	97	50.696	ENSHGLG00000003603	TOE1	93	50.292	Heterocephalus_glaber_female
ENSORLG00000012609	toe1	97	50.696	ENSHGLG00100015361	TOE1	93	50.292	Heterocephalus_glaber_male
ENSORLG00000012609	toe1	97	65.923	ENSHCOG00000016394	toe1	97	65.992	Hippocampus_comes
ENSORLG00000012609	toe1	97	58.182	ENSIPUG00000002717	toe1	97	56.162	Ictalurus_punctatus
ENSORLG00000012609	toe1	99	50.977	ENSSTOG00000010669	TOE1	94	50.000	Ictidomys_tridecemlineatus
ENSORLG00000012609	toe1	55	69.048	ENSJJAG00000021743	Toe1	95	69.048	Jaculus_jaculus
ENSORLG00000012609	toe1	99	75.769	ENSKMAG00000020891	toe1	98	75.769	Kryptolebias_marmoratus
ENSORLG00000012609	toe1	99	67.424	ENSLBEG00000010456	toe1	99	68.868	Labrus_bergylta
ENSORLG00000012609	toe1	99	56.870	ENSLOCG00000002852	toe1	99	57.308	Lepisosteus_oculatus
ENSORLG00000012609	toe1	97	48.996	ENSLAFG00000017370	TOE1	94	48.515	Loxodonta_africana
ENSORLG00000012609	toe1	97	50.800	ENSMFAG00000042312	TOE1	86	69.266	Macaca_fascicularis
ENSORLG00000012609	toe1	97	50.800	ENSMMUG00000020081	TOE1	100	50.507	Macaca_mulatta
ENSORLG00000012609	toe1	97	50.800	ENSMNEG00000032131	TOE1	94	51.186	Macaca_nemestrina
ENSORLG00000012609	toe1	97	50.800	ENSMLEG00000028729	TOE1	94	51.186	Mandrillus_leucophaeus
ENSORLG00000012609	toe1	100	69.720	ENSMAMG00000015291	toe1	100	69.720	Mastacembelus_armatus
ENSORLG00000012609	toe1	99	73.496	ENSMZEG00005014305	toe1	99	73.684	Maylandia_zebra
ENSORLG00000012609	toe1	89	47.046	ENSMGAG00000010387	TOE1	99	47.569	Meleagris_gallopavo
ENSORLG00000012609	toe1	99	50.000	ENSMAUG00000022118	Toe1	94	48.828	Mesocricetus_auratus
ENSORLG00000012609	toe1	98	50.098	ENSMICG00000047305	-	93	49.116	Microcebus_murinus
ENSORLG00000012609	toe1	62	51.724	ENSMICG00000032375	-	79	56.944	Microcebus_murinus
ENSORLG00000012609	toe1	97	50.690	ENSMOCG00000012917	Toe1	94	50.097	Microtus_ochrogaster
ENSORLG00000012609	toe1	99	63.960	ENSMMOG00000020894	toe1	99	61.404	Mola_mola
ENSORLG00000012609	toe1	99	49.310	ENSMODG00000002430	TOE1	99	49.513	Monodelphis_domestica
ENSORLG00000012609	toe1	99	73.295	ENSMALG00000010017	toe1	99	72.917	Monopterus_albus
ENSORLG00000012609	toe1	97	48.031	MGP_CAROLIEiJ_G0026342	Toe1	98	68.649	Mus_caroli
ENSORLG00000012609	toe1	97	48.228	ENSMUSG00000028688	Toe1	98	69.189	Mus_musculus
ENSORLG00000012609	toe1	97	48.819	MGP_PahariEiJ_G0028674	Toe1	98	69.189	Mus_pahari
ENSORLG00000012609	toe1	97	48.228	MGP_SPRETEiJ_G0027314	Toe1	98	69.730	Mus_spretus
ENSORLG00000012609	toe1	99	50.682	ENSMPUG00000013123	TOE1	93	49.708	Mustela_putorius_furo
ENSORLG00000012609	toe1	99	50.294	ENSMLUG00000005649	TOE1	94	50.294	Myotis_lucifugus
ENSORLG00000012609	toe1	99	74.563	ENSNBRG00000019107	toe1	99	74.269	Neolamprologus_brichardi
ENSORLG00000012609	toe1	97	50.198	ENSNLEG00000014383	TOE1	85	69.725	Nomascus_leucogenys
ENSORLG00000012609	toe1	76	71.975	ENSMEUG00000000629	-	86	72.436	Notamacropus_eugenii
ENSORLG00000012609	toe1	97	50.397	ENSOPRG00000004057	TOE1	94	49.513	Ochotona_princeps
ENSORLG00000012609	toe1	99	50.690	ENSODEG00000008239	TOE1	94	49.805	Octodon_degus
ENSORLG00000012609	toe1	99	72.881	ENSONIG00000009053	toe1	99	73.070	Oreochromis_niloticus
ENSORLG00000012609	toe1	75	52.632	ENSOANG00000011797	-	95	38.911	Ornithorhynchus_anatinus
ENSORLG00000012609	toe1	99	50.881	ENSOCUG00000017503	TOE1	94	50.097	Oryctolagus_cuniculus
ENSORLG00000012609	toe1	100	98.031	ENSORLG00020006441	toe1	100	98.031	Oryzias_latipes_hni
ENSORLG00000012609	toe1	100	97.441	ENSORLG00015001476	toe1	99	97.441	Oryzias_latipes_hsok
ENSORLG00000012609	toe1	100	89.370	ENSOMEG00000014153	toe1	100	89.370	Oryzias_melastigma
ENSORLG00000012609	toe1	99	38.760	ENSOGAG00000032761	-	64	66.667	Otolemur_garnettii
ENSORLG00000012609	toe1	97	49.901	ENSOARG00000001561	TOE1	94	49.513	Ovis_aries
ENSORLG00000012609	toe1	97	50.000	ENSPPAG00000043315	TOE1	85	69.266	Pan_paniscus
ENSORLG00000012609	toe1	97	49.901	ENSPPRG00000011880	TOE1	94	49.219	Panthera_pardus
ENSORLG00000012609	toe1	97	49.901	ENSPTIG00000008086	TOE1	94	49.219	Panthera_tigris_altaica
ENSORLG00000012609	toe1	97	50.000	ENSPTRG00000000672	TOE1	85	69.266	Pan_troglodytes
ENSORLG00000012609	toe1	97	50.800	ENSPANG00000012549	TOE1	92	51.186	Papio_anubis
ENSORLG00000012609	toe1	99	53.861	ENSPKIG00000010811	toe1	96	54.382	Paramormyrops_kingsleyae
ENSORLG00000012609	toe1	55	65.035	ENSPSIG00000010299	TOE1	99	65.035	Pelodiscus_sinensis
ENSORLG00000012609	toe1	99	69.455	ENSPMGG00000020389	toe1	99	69.455	Periophthalmus_magnuspinnatus
ENSORLG00000012609	toe1	99	50.391	ENSPEMG00000021892	Toe1	94	49.805	Peromyscus_maniculatus_bairdii
ENSORLG00000012609	toe1	97	42.967	ENSPMAG00000004794	toe1	97	42.664	Petromyzon_marinus
ENSORLG00000012609	toe1	99	47.656	ENSPCIG00000027569	TOE1	98	48.170	Phascolarctos_cinereus
ENSORLG00000012609	toe1	100	71.124	ENSPFOG00000019517	toe1	100	70.543	Poecilia_formosa
ENSORLG00000012609	toe1	100	70.930	ENSPLAG00000018228	toe1	100	70.349	Poecilia_latipinna
ENSORLG00000012609	toe1	100	70.930	ENSPMEG00000019956	toe1	100	70.349	Poecilia_mexicana
ENSORLG00000012609	toe1	97	50.000	ENSPPYG00000001414	TOE1	94	50.294	Pongo_abelii
ENSORLG00000012609	toe1	99	49.020	ENSPCAG00000013351	TOE1	94	48.235	Procavia_capensis
ENSORLG00000012609	toe1	98	50.591	ENSPCOG00000000982	TOE1	85	68.807	Propithecus_coquereli
ENSORLG00000012609	toe1	91	48.408	ENSPVAG00000014998	TOE1	87	47.346	Pteropus_vampyrus
ENSORLG00000012609	toe1	99	73.308	ENSPNYG00000019914	toe1	99	73.308	Pundamilia_nyererei
ENSORLG00000012609	toe1	99	58.904	ENSPNAG00000021933	toe1	98	59.100	Pygocentrus_nattereri
ENSORLG00000012609	toe1	97	49.105	ENSRNOG00000017561	Toe1	93	47.368	Rattus_norvegicus
ENSORLG00000012609	toe1	97	50.898	ENSRBIG00000031463	TOE1	86	69.266	Rhinopithecus_bieti
ENSORLG00000012609	toe1	97	51.000	ENSRROG00000026371	TOE1	86	69.266	Rhinopithecus_roxellana
ENSORLG00000012609	toe1	99	50.098	ENSSBOG00000026044	-	85	69.266	Saimiri_boliviensis_boliviensis
ENSORLG00000012609	toe1	99	44.466	ENSSBOG00000032639	-	91	44.466	Saimiri_boliviensis_boliviensis
ENSORLG00000012609	toe1	97	48.016	ENSSHAG00000010201	TOE1	98	49.219	Sarcophilus_harrisii
ENSORLG00000012609	toe1	99	59.921	ENSSFOG00015021182	toe1	98	55.133	Scleropages_formosus
ENSORLG00000012609	toe1	83	65.101	ENSSMAG00000015322	toe1	84	64.430	Scophthalmus_maximus
ENSORLG00000012609	toe1	100	71.483	ENSSDUG00000013278	toe1	100	71.483	Seriola_dumerili
ENSORLG00000012609	toe1	100	73.194	ENSSLDG00000021979	toe1	100	73.194	Seriola_lalandi_dorsalis
ENSORLG00000012609	toe1	98	49.267	ENSSPUG00000003464	TOE1	99	49.908	Sphenodon_punctatus
ENSORLG00000012609	toe1	100	74.525	ENSSPAG00000009490	toe1	100	74.525	Stegastes_partitus
ENSORLG00000012609	toe1	98	49.126	ENSSSCG00000003918	TOE1	93	48.438	Sus_scrofa
ENSORLG00000012609	toe1	98	44.031	ENSTGUG00000007927	TOE1	99	44.031	Taeniopygia_guttata
ENSORLG00000012609	toe1	99	70.099	ENSTRUG00000025603	toe1	99	70.099	Takifugu_rubripes
ENSORLG00000012609	toe1	97	62.325	ENSTNIG00000017614	toe1	99	62.648	Tetraodon_nigroviridis
ENSORLG00000012609	toe1	68	62.547	ENSTBEG00000017625	TOE1	68	62.774	Tupaia_belangeri
ENSORLG00000012609	toe1	97	49.902	ENSTTRG00000008815	TOE1	94	49.804	Tursiops_truncatus
ENSORLG00000012609	toe1	97	50.495	ENSUAMG00000017724	TOE1	94	49.805	Ursus_americanus
ENSORLG00000012609	toe1	96	49.699	ENSUMAG00000024253	TOE1	100	48.697	Ursus_maritimus
ENSORLG00000012609	toe1	97	51.089	ENSVPAG00000011731	TOE1	94	50.487	Vicugna_pacos
ENSORLG00000012609	toe1	99	50.000	ENSVVUG00000007469	TOE1	88	49.023	Vulpes_vulpes
ENSORLG00000012609	toe1	99	72.211	ENSXCOG00000007796	toe1	100	70.254	Xiphophorus_couchianus
ENSORLG00000012609	toe1	100	71.893	ENSXMAG00000011102	toe1	100	71.012	Xiphophorus_maculatus