EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000012611 (Gene tree)
Gene ID: 100335142
Gene Symbol: pum2
Alias: -
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 18916 bases
Position: chr24:6531415-6550330
Accession: 100335142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000015797	PUF	PF00806.19	3.9e-71	1	7
ENSORLP00000015797	PUF	PF00806.19	3.9e-71	2	7
ENSORLP00000015797	PUF	PF00806.19	3.9e-71	3	7
ENSORLP00000015797	PUF	PF00806.19	3.9e-71	4	7
ENSORLP00000015797	PUF	PF00806.19	3.9e-71	5	7
ENSORLP00000015797	PUF	PF00806.19	3.9e-71	6	7
ENSORLP00000015797	PUF	PF00806.19	3.9e-71	7	7
ENSORLP00000031327	PUF	PF00806.19	1.6e-69	1	7
ENSORLP00000031327	PUF	PF00806.19	1.6e-69	2	7
ENSORLP00000031327	PUF	PF00806.19	1.6e-69	3	7
ENSORLP00000031327	PUF	PF00806.19	1.6e-69	4	7
ENSORLP00000031327	PUF	PF00806.19	1.6e-69	5	7
ENSORLP00000031327	PUF	PF00806.19	1.6e-69	6	7
ENSORLP00000031327	PUF	PF00806.19	1.6e-69	7	7
ENSORLP00000030890	PUF	PF00806.19	1.7e-67	1	7
ENSORLP00000030890	PUF	PF00806.19	1.7e-67	2	7
ENSORLP00000030890	PUF	PF00806.19	1.7e-67	3	7
ENSORLP00000030890	PUF	PF00806.19	1.7e-67	4	7
ENSORLP00000030890	PUF	PF00806.19	1.7e-67	5	7
ENSORLP00000030890	PUF	PF00806.19	1.7e-67	6	7
ENSORLP00000030890	PUF	PF00806.19	1.7e-67	7	7
ENSORLP00000043458	PUF	PF00806.19	1.7e-67	1	7
ENSORLP00000043458	PUF	PF00806.19	1.7e-67	2	7
ENSORLP00000043458	PUF	PF00806.19	1.7e-67	3	7
ENSORLP00000043458	PUF	PF00806.19	1.7e-67	4	7
ENSORLP00000043458	PUF	PF00806.19	1.7e-67	5	7
ENSORLP00000043458	PUF	PF00806.19	1.7e-67	6	7
ENSORLP00000043458	PUF	PF00806.19	1.7e-67	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036637	-	6169	-	ENSORLP00000031327	1175 (aa)	-	-
ENSORLT00000045726	-	6241	-	ENSORLP00000030890	1199 (aa)	-	D0V737
ENSORLT00000015798	-	2931	-	ENSORLP00000015797	976 (aa)	-	H2MB76
ENSORLT00000046716	-	6015	-	ENSORLP00000043458	1199 (aa)	-	D0V737

Gene Model

Click here to download ENSORLG00000012611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000012611	pum2	89	83.373	ENSORLG00000011482	pum1	83	83.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012611	pum2	94	75.556	ENSG00000055917	PUM2	100	79.412	Homo_sapiens
ENSORLG00000012611	pum2	100	91.574	ENSAPOG00000015756	pum2	100	91.675	Acanthochromis_polyacanthus
ENSORLG00000012611	pum2	99	81.381	ENSAMEG00000002823	PUM2	96	90.488	Ailuropoda_melanoleuca
ENSORLG00000012611	pum2	90	97.689	ENSACIG00000010646	pum2	96	97.689	Amphilophus_citrinellus
ENSORLG00000012611	pum2	99	90.917	ENSAOCG00000016619	pum2	99	91.308	Amphiprion_ocellaris
ENSORLG00000012611	pum2	100	93.219	ENSAPEG00000019924	pum2	100	93.016	Amphiprion_percula
ENSORLG00000012611	pum2	100	92.244	ENSATEG00000015030	pum2	100	91.832	Anabas_testudineus
ENSORLG00000012611	pum2	100	81.513	ENSAPLG00000010496	PUM2	90	90.686	Anas_platyrhynchos
ENSORLG00000012611	pum2	100	81.092	ENSACAG00000010491	PUM2	91	90.196	Anolis_carolinensis
ENSORLG00000012611	pum2	100	81.723	ENSANAG00000021807	PUM2	90	90.931	Aotus_nancymaae
ENSORLG00000012611	pum2	100	92.339	ENSACLG00000022532	pum2	100	91.845	Astatotilapia_calliptera
ENSORLG00000012611	pum2	100	75.251	ENSBTAG00000011155	PUM2	100	78.793	Bos_taurus
ENSORLG00000012611	pum2	100	75.325	ENSCJAG00000007450	PUM2	100	74.600	Callithrix_jacchus
ENSORLG00000012611	pum2	90	74.561	ENSCAFG00000003839	PUM2	100	73.265	Canis_familiaris
ENSORLG00000012611	pum2	99	81.381	ENSCAFG00020025689	PUM2	92	90.488	Canis_lupus_dingo
ENSORLG00000012611	pum2	100	75.529	ENSCHIG00000022180	PUM2	100	73.817	Capra_hircus
ENSORLG00000012611	pum2	99	75.051	ENSTSYG00000014463	PUM2	100	73.567	Carlito_syrichta
ENSORLG00000012611	pum2	90	87.149	ENSCAPG00000016888	PUM2	99	84.778	Cavia_aperea
ENSORLG00000012611	pum2	100	75.449	ENSCPOG00000031996	PUM2	90	90.931	Cavia_porcellus
ENSORLG00000012611	pum2	94	75.767	ENSCCAG00000037035	PUM2	100	75.000	Cebus_capucinus
ENSORLG00000012611	pum2	100	81.723	ENSCATG00000043826	PUM2	90	90.931	Cercocebus_atys
ENSORLG00000012611	pum2	100	75.250	ENSCLAG00000006048	PUM2	90	90.931	Chinchilla_lanigera
ENSORLG00000012611	pum2	100	81.723	ENSCSAG00000008087	PUM2	90	90.931	Chlorocebus_sabaeus
ENSORLG00000012611	pum2	72	79.268	ENSCHOG00000004575	PUM2	75	79.268	Choloepus_hoffmanni
ENSORLG00000012611	pum2	100	74.000	ENSCPBG00000019966	PUM2	100	73.200	Chrysemys_picta_bellii
ENSORLG00000012611	pum2	100	81.723	ENSCANG00000032797	PUM2	90	90.931	Colobus_angolensis_palliatus
ENSORLG00000012611	pum2	100	75.325	ENSCGRG00001025023	Pum2	100	74.226	Cricetulus_griseus_chok1gshd
ENSORLG00000012611	pum2	100	75.325	ENSCGRG00000001580	Pum2	100	74.226	Cricetulus_griseus_crigri
ENSORLG00000012611	pum2	100	89.604	ENSCSEG00000020899	pum2	100	89.851	Cynoglossus_semilaevis
ENSORLG00000012611	pum2	100	91.261	ENSCVAG00000002426	pum2	100	90.602	Cyprinodon_variegatus
ENSORLG00000012611	pum2	100	85.558	ENSDARG00000061040	pum2	100	85.139	Danio_rerio
ENSORLG00000012611	pum2	97	75.891	ENSDNOG00000006733	PUM2	95	84.108	Dasypus_novemcinctus
ENSORLG00000012611	pum2	97	80.753	ENSDORG00000011453	Pum2	90	90.000	Dipodomys_ordii
ENSORLG00000012611	pum2	86	90.036	ENSETEG00000017683	PUM2	79	90.747	Echinops_telfairi
ENSORLG00000012611	pum2	95	53.778	ENSEBUG00000004435	pum2	86	83.171	Eptatretus_burgeri
ENSORLG00000012611	pum2	68	68.398	ENSEBUG00000014828	pum2	92	57.107	Eptatretus_burgeri
ENSORLG00000012611	pum2	99	81.723	ENSEASG00005009429	PUM2	96	90.931	Equus_asinus_asinus
ENSORLG00000012611	pum2	99	81.723	ENSECAG00000021930	PUM2	96	90.931	Equus_caballus
ENSORLG00000012611	pum2	75	71.698	ENSEEUG00000003224	-	74	71.698	Erinaceus_europaeus
ENSORLG00000012611	pum2	100	87.449	ENSELUG00000014997	pum2	100	87.049	Esox_lucius
ENSORLG00000012611	pum2	99	81.513	ENSFCAG00000027520	PUM2	96	90.686	Felis_catus
ENSORLG00000012611	pum2	90	73.592	ENSFALG00000001759	PUM2	100	73.130	Ficedula_albicollis
ENSORLG00000012611	pum2	100	74.925	ENSFDAG00000019685	PUM2	90	90.441	Fukomys_damarensis
ENSORLG00000012611	pum2	100	92.690	ENSFHEG00000021596	pum2	100	91.980	Fundulus_heteroclitus
ENSORLG00000012611	pum2	90	85.529	ENSGMOG00000006903	pum2	100	84.323	Gadus_morhua
ENSORLG00000012611	pum2	99	73.225	ENSGALG00000016481	PUM2	100	72.828	Gallus_gallus
ENSORLG00000012611	pum2	100	92.191	ENSGAFG00000013691	pum2	100	91.886	Gambusia_affinis
ENSORLG00000012611	pum2	90	89.459	ENSGACG00000009670	pum2	91	97.561	Gasterosteus_aculeatus
ENSORLG00000012611	pum2	100	71.382	ENSGAGG00000020698	PUM2	100	73.315	Gopherus_agassizii
ENSORLG00000012611	pum2	94	75.661	ENSGGOG00000011374	PUM2	100	74.894	Gorilla_gorilla
ENSORLG00000012611	pum2	100	85.450	ENSHBUG00000016453	pum2	100	85.606	Haplochromis_burtoni
ENSORLG00000012611	pum2	100	74.200	ENSHGLG00000007892	PUM2	100	73.600	Heterocephalus_glaber_female
ENSORLG00000012611	pum2	100	67.500	ENSHGLG00100015510	PUM2	90	89.512	Heterocephalus_glaber_male
ENSORLG00000012611	pum2	100	89.983	ENSHCOG00000010119	pum2	100	89.983	Hippocampus_comes
ENSORLG00000012611	pum2	100	75.300	ENSSTOG00000006262	PUM2	100	74.700	Ictidomys_tridecemlineatus
ENSORLG00000012611	pum2	100	81.381	ENSJJAG00000020969	Pum2	90	90.488	Jaculus_jaculus
ENSORLG00000012611	pum2	100	90.677	ENSKMAG00000017216	pum2	100	90.594	Kryptolebias_marmoratus
ENSORLG00000012611	pum2	99	97.805	ENSLBEG00000020488	pum2	100	90.594	Labrus_bergylta
ENSORLG00000012611	pum2	100	73.115	ENSLACG00000008723	PUM2	100	72.563	Latimeria_chalumnae
ENSORLG00000012611	pum2	100	75.431	ENSLOCG00000017196	pum2	100	75.473	Lepisosteus_oculatus
ENSORLG00000012611	pum2	100	80.962	ENSLAFG00000009278	PUM2	91	90.244	Loxodonta_africana
ENSORLG00000012611	pum2	100	81.723	ENSMFAG00000000492	PUM2	90	90.931	Macaca_fascicularis
ENSORLG00000012611	pum2	100	81.723	ENSMMUG00000023181	PUM2	90	90.931	Macaca_mulatta
ENSORLG00000012611	pum2	100	81.723	ENSMNEG00000039659	PUM2	90	90.931	Macaca_nemestrina
ENSORLG00000012611	pum2	100	81.723	ENSMLEG00000039243	PUM2	90	90.931	Mandrillus_leucophaeus
ENSORLG00000012611	pum2	100	91.509	ENSMAMG00000006121	pum2	100	90.602	Mastacembelus_armatus
ENSORLG00000012611	pum2	100	92.339	ENSMZEG00005000791	pum2	100	91.845	Maylandia_zebra
ENSORLG00000012611	pum2	100	67.937	ENSMGAG00000014040	PUM2	100	72.936	Meleagris_gallopavo
ENSORLG00000012611	pum2	100	68.611	ENSMAUG00000000311	Pum2	100	73.708	Mesocricetus_auratus
ENSORLG00000012611	pum2	94	75.581	ENSMICG00000011647	PUM2	90	90.488	Microcebus_murinus
ENSORLG00000012611	pum2	100	68.738	ENSMOCG00000013663	Pum2	100	73.660	Microtus_ochrogaster
ENSORLG00000012611	pum2	90	90.428	ENSMMOG00000002975	pum2	100	90.799	Mola_mola
ENSORLG00000012611	pum2	90	73.070	ENSMODG00000009811	PUM2	100	71.599	Monodelphis_domestica
ENSORLG00000012611	pum2	100	89.564	ENSMALG00000022313	pum2	100	88.551	Monopterus_albus
ENSORLG00000012611	pum2	100	75.779	MGP_CAROLIEiJ_G0017603	Pum2	100	74.812	Mus_caroli
ENSORLG00000012611	pum2	100	81.513	ENSMUSG00000020594	Pum2	90	90.686	Mus_musculus
ENSORLG00000012611	pum2	100	75.928	MGP_PahariEiJ_G0029361	Pum2	90	90.931	Mus_pahari
ENSORLG00000012611	pum2	100	81.513	MGP_SPRETEiJ_G0018447	Pum2	90	90.686	Mus_spretus
ENSORLG00000012611	pum2	90	74.746	ENSMPUG00000013734	PUM2	100	73.451	Mustela_putorius_furo
ENSORLG00000012611	pum2	99	81.513	ENSMLUG00000007362	PUM2	96	90.686	Myotis_lucifugus
ENSORLG00000012611	pum2	90	75.208	ENSNGAG00000016665	-	100	73.728	Nannospalax_galili
ENSORLG00000012611	pum2	90	53.088	ENSNGAG00000016239	-	99	51.109	Nannospalax_galili
ENSORLG00000012611	pum2	100	82.692	ENSNBRG00000020737	pum2	100	81.000	Neolamprologus_brichardi
ENSORLG00000012611	pum2	94	75.661	ENSNLEG00000002509	PUM2	100	74.894	Nomascus_leucogenys
ENSORLG00000012611	pum2	87	85.000	ENSMEUG00000016567	PUM2	96	77.805	Notamacropus_eugenii
ENSORLG00000012611	pum2	74	61.458	ENSOPRG00000001963	PUM2	93	60.584	Ochotona_princeps
ENSORLG00000012611	pum2	100	75.025	ENSODEG00000007823	PUM2	90	90.732	Octodon_degus
ENSORLG00000012611	pum2	100	92.521	ENSONIG00000006119	pum2	100	92.017	Oreochromis_niloticus
ENSORLG00000012611	pum2	90	74.470	ENSOCUG00000017908	PUM2	100	73.272	Oryctolagus_cuniculus
ENSORLG00000012611	pum2	100	99.385	ENSORLG00020014452	pum2	100	99.385	Oryzias_latipes_hni
ENSORLG00000012611	pum2	100	99.249	ENSORLG00015009427	pum2	100	99.249	Oryzias_latipes_hsok
ENSORLG00000012611	pum2	94	95.177	ENSOMEG00000005889	pum2	100	95.177	Oryzias_melastigma
ENSORLG00000012611	pum2	98	75.391	ENSOGAG00000002187	PUM2	100	74.453	Otolemur_garnettii
ENSORLG00000012611	pum2	90	74.423	ENSOARG00000017236	PUM2	100	73.130	Ovis_aries
ENSORLG00000012611	pum2	94	75.661	ENSPPAG00000023095	PUM2	100	74.894	Pan_paniscus
ENSORLG00000012611	pum2	99	81.513	ENSPPRG00000021443	PUM2	96	90.686	Panthera_pardus
ENSORLG00000012611	pum2	99	81.513	ENSPTIG00000018982	PUM2	96	90.686	Panthera_tigris_altaica
ENSORLG00000012611	pum2	94	75.661	ENSPTRG00000011692	PUM2	100	74.894	Pan_troglodytes
ENSORLG00000012611	pum2	94	64.000	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSORLG00000012611	pum2	100	68.600	ENSPKIG00000023195	pum2	100	72.764	Paramormyrops_kingsleyae
ENSORLG00000012611	pum2	100	71.875	ENSPSIG00000011626	PUM2	99	71.546	Pelodiscus_sinensis
ENSORLG00000012611	pum2	100	89.522	ENSPMGG00000016123	pum2	100	88.911	Periophthalmus_magnuspinnatus
ENSORLG00000012611	pum2	100	68.675	ENSPEMG00000008357	Pum2	100	73.684	Peromyscus_maniculatus_bairdii
ENSORLG00000012611	pum2	91	62.375	ENSPMAG00000007038	pum2	90	82.850	Petromyzon_marinus
ENSORLG00000012611	pum2	100	92.327	ENSPFOG00000019208	pum2	100	92.079	Poecilia_formosa
ENSORLG00000012611	pum2	100	92.596	ENSPLAG00000001826	pum2	100	92.292	Poecilia_latipinna
ENSORLG00000012611	pum2	100	92.327	ENSPMEG00000015766	pum2	100	92.670	Poecilia_mexicana
ENSORLG00000012611	pum2	100	92.300	ENSPREG00000006905	pum2	100	91.996	Poecilia_reticulata
ENSORLG00000012611	pum2	90	75.000	ENSPPYG00000012617	PUM2	100	73.893	Pongo_abelii
ENSORLG00000012611	pum2	76	88.889	ENSPCAG00000008001	PUM2	70	88.889	Procavia_capensis
ENSORLG00000012611	pum2	99	75.380	ENSPCOG00000019636	PUM2	100	74.468	Propithecus_coquereli
ENSORLG00000012611	pum2	98	70.711	ENSPVAG00000002920	PUM2	95	78.049	Pteropus_vampyrus
ENSORLG00000012611	pum2	100	92.257	ENSPNYG00000022901	pum2	100	91.763	Pundamilia_nyererei
ENSORLG00000012611	pum2	99	86.957	ENSPNAG00000008025	pum2	100	85.879	Pygocentrus_nattereri
ENSORLG00000012611	pum2	100	75.250	ENSRNOG00000006180	Pum2	91	90.441	Rattus_norvegicus
ENSORLG00000012611	pum2	100	81.723	ENSRBIG00000044880	PUM2	90	90.931	Rhinopithecus_bieti
ENSORLG00000012611	pum2	94	75.767	ENSSBOG00000022007	PUM2	100	75.000	Saimiri_boliviensis_boliviensis
ENSORLG00000012611	pum2	90	76.819	ENSSFOG00015003476	pum2	87	90.976	Scleropages_formosus
ENSORLG00000012611	pum2	100	89.786	ENSSMAG00000018236	pum2	100	90.198	Scophthalmus_maximus
ENSORLG00000012611	pum2	97	87.451	ENSSDUG00000001800	pum2	100	87.160	Seriola_dumerili
ENSORLG00000012611	pum2	100	92.086	ENSSLDG00000000981	pum2	100	91.921	Seriola_lalandi_dorsalis
ENSORLG00000012611	pum2	96	69.097	ENSSARG00000010992	PUM2	76	80.909	Sorex_araneus
ENSORLG00000012611	pum2	99	81.303	ENSSPUG00000017012	PUM2	99	90.441	Sphenodon_punctatus
ENSORLG00000012611	pum2	100	93.617	ENSSPAG00000022948	pum2	100	93.212	Stegastes_partitus
ENSORLG00000012611	pum2	95	90.777	ENSSSCG00000008600	PUM2	95	90.931	Sus_scrofa
ENSORLG00000012611	pum2	90	73.500	ENSTGUG00000013149	PUM2	100	73.038	Taeniopygia_guttata
ENSORLG00000012611	pum2	100	87.225	ENSTRUG00000018167	pum2	100	86.375	Takifugu_rubripes
ENSORLG00000012611	pum2	99	95.610	ENSTNIG00000003116	pum2	100	88.507	Tetraodon_nigroviridis
ENSORLG00000012611	pum2	81	80.962	ENSTBEG00000008729	PUM2	79	86.279	Tupaia_belangeri
ENSORLG00000012611	pum2	99	80.962	ENSTTRG00000004887	PUM2	96	90.000	Tursiops_truncatus
ENSORLG00000012611	pum2	69	81.381	ENSUAMG00000008120	PUM2	97	90.488	Ursus_americanus
ENSORLG00000012611	pum2	100	75.451	ENSUMAG00000023198	PUM2	100	73.647	Ursus_maritimus
ENSORLG00000012611	pum2	90	74.608	ENSVPAG00000005056	PUM2	100	73.315	Vicugna_pacos
ENSORLG00000012611	pum2	100	75.351	ENSVVUG00000014829	PUM2	100	73.547	Vulpes_vulpes
ENSORLG00000012611	pum2	100	67.691	ENSXETG00000008903	pum2	82	88.235	Xenopus_tropicalis
ENSORLG00000012611	pum2	97	88.098	ENSXCOG00000002556	pum2	100	87.805	Xiphophorus_couchianus
ENSORLG00000012611	pum2	100	92.698	ENSXMAG00000017682	pum2	100	92.394	Xiphophorus_maculatus