EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000012818 (Gene tree)
Gene ID: 101163212
Gene Symbol: rnf17
Alias: -
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 42838 bases
Position: chr21:11081965-11124802
Accession: 101163212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000016050	TUDOR	PF00567.24	3.8e-84	1	4
ENSORLP00000016050	TUDOR	PF00567.24	3.8e-84	2	4
ENSORLP00000016050	TUDOR	PF00567.24	3.8e-84	3	4
ENSORLP00000016050	TUDOR	PF00567.24	3.8e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000016051	-	4919	XM_023950859	ENSORLP00000016050	1380 (aa)	XP_023806627	H2MBX3

Gene Model

Click here to download ENSORLG00000012818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000012818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000012818	rnf17	84	34.091	ENSORLG00000015951	amh	58	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000012818	rnf17	98	32.579	ENSG00000132972	RNF17	99	35.886	Homo_sapiens
ENSORLG00000012818	rnf17	93	57.707	ENSAPOG00000017034	rnf17	90	57.403	Acanthochromis_polyacanthus
ENSORLG00000012818	rnf17	98	32.915	ENSAMEG00000017340	RNF17	86	32.869	Ailuropoda_melanoleuca
ENSORLG00000012818	rnf17	99	58.003	ENSAOCG00000018283	rnf17	89	58.033	Amphiprion_ocellaris
ENSORLG00000012818	rnf17	99	52.432	ENSAPEG00000022338	rnf17	97	52.106	Amphiprion_percula
ENSORLG00000012818	rnf17	93	56.837	ENSATEG00000002067	rnf17	93	56.837	Anabas_testudineus
ENSORLG00000012818	rnf17	98	31.013	ENSAPLG00000003969	RNF17	83	32.792	Anas_platyrhynchos
ENSORLG00000012818	rnf17	85	34.687	ENSACAG00000001418	RNF17	75	34.800	Anolis_carolinensis
ENSORLG00000012818	rnf17	95	30.071	ENSANAG00000029969	RNF17	92	30.856	Aotus_nancymaae
ENSORLG00000012818	rnf17	99	56.219	ENSACLG00000018279	rnf17	89	56.430	Astatotilapia_calliptera
ENSORLG00000012818	rnf17	93	44.643	ENSAMXG00000011002	rnf17	90	43.707	Astyanax_mexicanus
ENSORLG00000012818	rnf17	67	35.660	ENSBTAG00000000278	RNF17	98	35.660	Bos_taurus
ENSORLG00000012818	rnf17	84	35.621	ENSCJAG00000018937	RNF17	98	37.366	Callithrix_jacchus
ENSORLG00000012818	rnf17	95	32.351	ENSCAFG00000007418	RNF17	85	32.063	Canis_familiaris
ENSORLG00000012818	rnf17	67	34.894	ENSCAFG00020002919	-	98	35.241	Canis_lupus_dingo
ENSORLG00000012818	rnf17	98	32.429	ENSCHIG00000026716	RNF17	98	35.660	Capra_hircus
ENSORLG00000012818	rnf17	98	32.316	ENSTSYG00000000365	RNF17	97	35.401	Carlito_syrichta
ENSORLG00000012818	rnf17	73	31.094	ENSCAPG00000012908	RNF17	75	31.041	Cavia_aperea
ENSORLG00000012818	rnf17	84	34.556	ENSCCAG00000026725	RNF17	97	35.964	Cebus_capucinus
ENSORLG00000012818	rnf17	98	32.289	ENSCATG00000040352	RNF17	98	36.419	Cercocebus_atys
ENSORLG00000012818	rnf17	98	32.920	ENSCLAG00000004127	RNF17	87	33.036	Chinchilla_lanigera
ENSORLG00000012818	rnf17	98	32.491	ENSCSAG00000018019	RNF17	86	32.453	Chlorocebus_sabaeus
ENSORLG00000012818	rnf17	98	32.616	ENSCPBG00000020920	RNF17	91	32.355	Chrysemys_picta_bellii
ENSORLG00000012818	rnf17	98	32.236	ENSCANG00000032927	RNF17	98	36.874	Colobus_angolensis_palliatus
ENSORLG00000012818	rnf17	99	34.282	ENSCGRG00001022658	Rnf17	88	34.169	Cricetulus_griseus_chok1gshd
ENSORLG00000012818	rnf17	99	34.282	ENSCGRG00000009924	Rnf17	88	34.169	Cricetulus_griseus_crigri
ENSORLG00000012818	rnf17	99	46.375	ENSCSEG00000008626	rnf17	96	46.044	Cynoglossus_semilaevis
ENSORLG00000012818	rnf17	93	49.147	ENSCVAG00000017008	rnf17	93	59.302	Cyprinodon_variegatus
ENSORLG00000012818	rnf17	99	41.832	ENSDARG00000056387	rnf17	88	41.726	Danio_rerio
ENSORLG00000012818	rnf17	98	32.140	ENSDNOG00000006115	RNF17	72	34.211	Dasypus_novemcinctus
ENSORLG00000012818	rnf17	66	40.179	ENSEASG00005001421	-	98	40.179	Equus_asinus_asinus
ENSORLG00000012818	rnf17	98	32.757	ENSECAG00000017152	RNF17	85	32.757	Equus_caballus
ENSORLG00000012818	rnf17	67	30.736	ENSEEUG00000000332	RNF17	65	30.736	Erinaceus_europaeus
ENSORLG00000012818	rnf17	99	45.606	ENSELUG00000005626	rnf17	89	45.492	Esox_lucius
ENSORLG00000012818	rnf17	98	32.821	ENSFCAG00000004914	RNF17	99	35.435	Felis_catus
ENSORLG00000012818	rnf17	99	31.745	ENSFALG00000008766	RNF17	79	33.552	Ficedula_albicollis
ENSORLG00000012818	rnf17	98	32.625	ENSFDAG00000017857	RNF17	86	32.393	Fukomys_damarensis
ENSORLG00000012818	rnf17	99	53.390	ENSFHEG00000014822	rnf17	89	53.066	Fundulus_heteroclitus
ENSORLG00000012818	rnf17	88	68.333	ENSGAFG00000004463	rnf17	94	68.333	Gambusia_affinis
ENSORLG00000012818	rnf17	59	55.192	ENSGACG00000001340	-	100	55.192	Gasterosteus_aculeatus
ENSORLG00000012818	rnf17	95	31.418	ENSGAGG00000016999	RNF17	70	34.043	Gopherus_agassizii
ENSORLG00000012818	rnf17	98	32.832	ENSGGOG00000014491	RNF17	98	36.571	Gorilla_gorilla
ENSORLG00000012818	rnf17	99	56.430	ENSHBUG00000003554	rnf17	89	56.641	Haplochromis_burtoni
ENSORLG00000012818	rnf17	99	32.769	ENSHGLG00000007270	RNF17	88	32.473	Heterocephalus_glaber_female
ENSORLG00000012818	rnf17	99	33.104	ENSHGLG00100017393	RNF17	88	32.337	Heterocephalus_glaber_male
ENSORLG00000012818	rnf17	91	44.842	ENSHCOG00000017676	rnf17	94	44.755	Hippocampus_comes
ENSORLG00000012818	rnf17	90	46.252	ENSIPUG00000001087	rnf17	85	46.252	Ictalurus_punctatus
ENSORLG00000012818	rnf17	72	33.580	ENSSTOG00000011255	-	99	33.830	Ictidomys_tridecemlineatus
ENSORLG00000012818	rnf17	99	32.682	ENSJJAG00000016584	Rnf17	87	32.770	Jaculus_jaculus
ENSORLG00000012818	rnf17	99	57.143	ENSKMAG00000013403	rnf17	88	57.002	Kryptolebias_marmoratus
ENSORLG00000012818	rnf17	93	53.910	ENSLBEG00000014910	rnf17	88	53.455	Labrus_bergylta
ENSORLG00000012818	rnf17	99	32.095	ENSLACG00000000323	RNF17	99	32.088	Latimeria_chalumnae
ENSORLG00000012818	rnf17	99	35.273	ENSLOCG00000010768	rnf17	88	35.406	Lepisosteus_oculatus
ENSORLG00000012818	rnf17	98	32.491	ENSMFAG00000032388	RNF17	98	36.419	Macaca_fascicularis
ENSORLG00000012818	rnf17	98	32.743	ENSMMUG00000014610	RNF17	98	36.419	Macaca_mulatta
ENSORLG00000012818	rnf17	98	32.491	ENSMNEG00000011234	RNF17	98	36.419	Macaca_nemestrina
ENSORLG00000012818	rnf17	98	32.399	ENSMLEG00000030227	RNF17	86	32.359	Mandrillus_leucophaeus
ENSORLG00000012818	rnf17	91	56.627	ENSMAMG00000020403	rnf17	93	56.627	Mastacembelus_armatus
ENSORLG00000012818	rnf17	99	56.430	ENSMZEG00005019166	rnf17	89	56.641	Maylandia_zebra
ENSORLG00000012818	rnf17	88	31.440	ENSMGAG00000015138	RNF17	96	31.725	Meleagris_gallopavo
ENSORLG00000012818	rnf17	99	33.084	ENSMAUG00000004788	Rnf17	88	33.151	Mesocricetus_auratus
ENSORLG00000012818	rnf17	99	32.327	ENSMICG00000010364	RNF17	98	35.426	Microcebus_murinus
ENSORLG00000012818	rnf17	68	36.281	ENSMOCG00000011818	-	99	36.073	Microtus_ochrogaster
ENSORLG00000012818	rnf17	91	52.685	ENSMMOG00000019514	rnf17	94	53.271	Mola_mola
ENSORLG00000012818	rnf17	98	33.218	ENSMODG00000007827	RNF17	85	32.716	Monodelphis_domestica
ENSORLG00000012818	rnf17	92	52.832	ENSMALG00000016943	rnf17	90	52.403	Monopterus_albus
ENSORLG00000012818	rnf17	99	33.582	MGP_CAROLIEiJ_G0019337	Rnf17	73	35.984	Mus_caroli
ENSORLG00000012818	rnf17	84	35.796	ENSMUSG00000000365	Rnf17	73	35.796	Mus_musculus
ENSORLG00000012818	rnf17	84	35.961	MGP_PahariEiJ_G0030355	Rnf17	73	35.961	Mus_pahari
ENSORLG00000012818	rnf17	84	36.043	MGP_SPRETEiJ_G0020228	Rnf17	73	36.043	Mus_spretus
ENSORLG00000012818	rnf17	98	32.398	ENSMPUG00000013305	RNF17	74	34.556	Mustela_putorius_furo
ENSORLG00000012818	rnf17	84	34.971	ENSMLUG00000003903	RNF17	74	34.971	Myotis_lucifugus
ENSORLG00000012818	rnf17	99	33.083	ENSNGAG00000013553	Rnf17	88	33.083	Nannospalax_galili
ENSORLG00000012818	rnf17	90	59.777	ENSNBRG00000012006	rnf17	91	59.777	Neolamprologus_brichardi
ENSORLG00000012818	rnf17	98	32.670	ENSNLEG00000013780	RNF17	98	36.280	Nomascus_leucogenys
ENSORLG00000012818	rnf17	79	43.939	ENSOPRG00000016743	-	51	43.939	Ochotona_princeps
ENSORLG00000012818	rnf17	56	32.470	ENSODEG00000005443	-	97	32.308	Octodon_degus
ENSORLG00000012818	rnf17	99	55.556	ENSONIG00000015746	rnf17	100	57.191	Oreochromis_niloticus
ENSORLG00000012818	rnf17	99	32.409	ENSOCUG00000007384	RNF17	88	32.260	Oryctolagus_cuniculus
ENSORLG00000012818	rnf17	99	98.763	ENSORLG00020009879	-	89	98.763	Oryzias_latipes_hni
ENSORLG00000012818	rnf17	99	98.035	ENSORLG00015013027	-	89	98.035	Oryzias_latipes_hsok
ENSORLG00000012818	rnf17	93	81.013	ENSOMEG00000009891	rnf17	94	79.518	Oryzias_melastigma
ENSORLG00000012818	rnf17	85	34.418	ENSOGAG00000014803	RNF17	74	34.587	Otolemur_garnettii
ENSORLG00000012818	rnf17	98	32.371	ENSOARG00000014641	RNF17	88	32.329	Ovis_aries
ENSORLG00000012818	rnf17	90	34.647	ENSPPAG00000028779	RNF17	98	36.738	Pan_paniscus
ENSORLG00000012818	rnf17	84	34.935	ENSPPRG00000009230	RNF17	99	35.586	Panthera_pardus
ENSORLG00000012818	rnf17	84	34.935	ENSPTIG00000001738	RNF17	99	35.586	Panthera_tigris_altaica
ENSORLG00000012818	rnf17	98	32.577	ENSPTRG00000005713	RNF17	98	36.738	Pan_troglodytes
ENSORLG00000012818	rnf17	98	32.766	ENSPANG00000007640	RNF17	98	36.419	Papio_anubis
ENSORLG00000012818	rnf17	91	42.027	ENSPKIG00000001648	rnf17	96	41.857	Paramormyrops_kingsleyae
ENSORLG00000012818	rnf17	85	35.126	ENSPSIG00000011245	RNF17	99	35.698	Pelodiscus_sinensis
ENSORLG00000012818	rnf17	99	34.305	ENSPEMG00000008693	Rnf17	88	34.262	Peromyscus_maniculatus_bairdii
ENSORLG00000012818	rnf17	79	34.248	ENSPCIG00000009190	-	92	33.956	Phascolarctos_cinereus
ENSORLG00000012818	rnf17	99	55.681	ENSPFOG00000007124	rnf17	88	55.673	Poecilia_formosa
ENSORLG00000012818	rnf17	99	56.374	ENSPLAG00000006198	rnf17	88	56.365	Poecilia_latipinna
ENSORLG00000012818	rnf17	99	56.445	ENSPMEG00000022432	rnf17	92	54.779	Poecilia_mexicana
ENSORLG00000012818	rnf17	89	60.317	ENSPREG00000001414	rnf17	87	60.317	Poecilia_reticulata
ENSORLG00000012818	rnf17	99	32.032	ENSPPYG00000005215	RNF17	88	31.959	Pongo_abelii
ENSORLG00000012818	rnf17	54	38.406	ENSPCAG00000002665	RNF17	50	38.406	Procavia_capensis
ENSORLG00000012818	rnf17	81	44.853	ENSPVAG00000013021	RNF17	72	44.853	Pteropus_vampyrus
ENSORLG00000012818	rnf17	93	45.323	ENSPNAG00000027505	rnf17	91	47.874	Pygocentrus_nattereri
ENSORLG00000012818	rnf17	99	33.763	ENSRNOG00000008059	Rnf17	88	33.741	Rattus_norvegicus
ENSORLG00000012818	rnf17	98	32.469	ENSRBIG00000027010	RNF17	86	32.302	Rhinopithecus_bieti
ENSORLG00000012818	rnf17	98	32.425	ENSRROG00000022801	RNF17	98	36.722	Rhinopithecus_roxellana
ENSORLG00000012818	rnf17	98	32.434	ENSSBOG00000021661	RNF17	99	36.486	Saimiri_boliviensis_boliviensis
ENSORLG00000012818	rnf17	98	32.663	ENSSHAG00000005609	RNF17	86	32.160	Sarcophilus_harrisii
ENSORLG00000012818	rnf17	85	41.017	ENSSFOG00015023037	rnf17	89	40.932	Scleropages_formosus
ENSORLG00000012818	rnf17	93	52.727	ENSSMAG00000007429	rnf17	89	52.273	Scophthalmus_maximus
ENSORLG00000012818	rnf17	93	56.155	ENSSDUG00000013530	rnf17	92	55.936	Seriola_dumerili
ENSORLG00000012818	rnf17	93	55.809	ENSSLDG00000019577	rnf17	90	56.373	Seriola_lalandi_dorsalis
ENSORLG00000012818	rnf17	77	34.043	ENSSARG00000003016	RNF17	62	34.043	Sorex_araneus
ENSORLG00000012818	rnf17	99	32.798	ENSSPUG00000008917	RNF17	92	32.411	Sphenodon_punctatus
ENSORLG00000012818	rnf17	91	56.202	ENSSPAG00000001925	rnf17	92	55.891	Stegastes_partitus
ENSORLG00000012818	rnf17	98	32.320	ENSSSCG00000009572	RNF17	88	32.320	Sus_scrofa
ENSORLG00000012818	rnf17	56	36.891	ENSTGUG00000011272	-	99	37.442	Taeniopygia_guttata
ENSORLG00000012818	rnf17	68	32.673	ENSTGUG00000011267	-	99	32.673	Taeniopygia_guttata
ENSORLG00000012818	rnf17	99	47.810	ENSTRUG00000015498	rnf17	89	47.810	Takifugu_rubripes
ENSORLG00000012818	rnf17	84	50.885	ENSTNIG00000015681	rnf17	99	50.715	Tetraodon_nigroviridis
ENSORLG00000012818	rnf17	98	30.297	ENSTTRG00000012698	RNF17	86	30.278	Tursiops_truncatus
ENSORLG00000012818	rnf17	62	39.565	ENSUMAG00000013953	-	98	34.586	Ursus_maritimus
ENSORLG00000012818	rnf17	98	32.163	ENSVVUG00000006226	RNF17	87	32.308	Vulpes_vulpes
ENSORLG00000012818	rnf17	80	30.085	ENSXETG00000034020	RNF17	99	37.073	Xenopus_tropicalis
ENSORLG00000012818	rnf17	93	53.677	ENSXCOG00000018295	rnf17	92	53.904	Xiphophorus_couchianus
ENSORLG00000012818	rnf17	93	55.199	ENSXMAG00000014747	rnf17	92	55.122	Xiphophorus_maculatus