EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000013135 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 16542 bases
Position: chr4:22253493-22270034
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000016465	zf-CCHC	PF00098.23	1.8e-08	1	2
ENSORLP00000016465	zf-CCHC	PF00098.23	1.8e-08	2	2
ENSORLP00000016465	PAP_assoc	PF03828.19	7.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000016466	-	1851	-	ENSORLP00000016465	616 (aa)	-	H2MD26

Gene Model

Click here to download ENSORLG00000013135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000013135	-	59	50.126	ENSORLG00000001714	-	96	43.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013135	-	95	63.906	ENSG00000134744	TUT4	100	55.342	Homo_sapiens
ENSORLG00000013135	-	56	79.887	ENSAPOG00000018983	-	94	80.114	Acanthochromis_polyacanthus
ENSORLG00000013135	-	95	64.275	ENSAMEG00000009340	TUT4	58	64.587	Ailuropoda_melanoleuca
ENSORLG00000013135	-	52	71.472	ENSACIG00000018887	-	64	60.145	Amphilophus_citrinellus
ENSORLG00000013135	-	100	78.838	ENSACIG00000018199	TUT4	99	79.104	Amphilophus_citrinellus
ENSORLG00000013135	-	100	80.117	ENSAOCG00000007862	TUT4	63	80.556	Amphiprion_ocellaris
ENSORLG00000013135	-	100	80.263	ENSAPEG00000019857	TUT4	66	80.702	Amphiprion_percula
ENSORLG00000013135	-	100	78.184	ENSATEG00000003823	TUT4	66	79.094	Anabas_testudineus
ENSORLG00000013135	-	58	64.935	ENSATEG00000022516	-	93	54.839	Anabas_testudineus
ENSORLG00000013135	-	96	67.460	ENSAPLG00000006345	TUT4	60	68.362	Anas_platyrhynchos
ENSORLG00000013135	-	100	61.821	ENSACAG00000008282	TUT4	61	61.821	Anolis_carolinensis
ENSORLG00000013135	-	95	57.698	ENSANAG00000013486	TUT4	58	61.812	Aotus_nancymaae
ENSORLG00000013135	-	100	77.193	ENSACLG00000023312	TUT4	67	78.216	Astatotilapia_calliptera
ENSORLG00000013135	-	100	69.643	ENSAMXG00000007030	TUT4	64	70.118	Astyanax_mexicanus
ENSORLG00000013135	-	95	64.465	ENSBTAG00000002721	TUT4	58	64.835	Bos_taurus
ENSORLG00000013135	-	95	64.062	ENSCJAG00000021588	TUT4	58	64.375	Callithrix_jacchus
ENSORLG00000013135	-	95	63.963	ENSCAFG00000003734	TUT4	63	64.275	Canis_familiaris
ENSORLG00000013135	-	87	69.162	ENSCAFG00020010923	-	92	69.162	Canis_lupus_dingo
ENSORLG00000013135	-	100	61.422	ENSCHIG00000023944	TUT4	57	64.050	Capra_hircus
ENSORLG00000013135	-	95	63.651	ENSTSYG00000009885	TUT4	62	64.119	Carlito_syrichta
ENSORLG00000013135	-	95	57.120	ENSCAPG00000005680	TUT4	62	58.080	Cavia_aperea
ENSORLG00000013135	-	95	62.776	ENSCPOG00000005086	TUT4	60	64.521	Cavia_porcellus
ENSORLG00000013135	-	74	73.333	ENSCCAG00000036903	TUT4	52	76.168	Cebus_capucinus
ENSORLG00000013135	-	52	72.671	ENSCCAG00000025142	-	69	59.871	Cebus_capucinus
ENSORLG00000013135	-	95	63.963	ENSCATG00000024618	TUT4	58	64.431	Cercocebus_atys
ENSORLG00000013135	-	95	64.818	ENSCLAG00000005255	TUT4	57	65.190	Chinchilla_lanigera
ENSORLG00000013135	-	95	63.963	ENSCSAG00000001277	TUT4	58	64.431	Chlorocebus_sabaeus
ENSORLG00000013135	-	100	62.115	ENSCPBG00000014796	TUT4	61	62.903	Chrysemys_picta_bellii
ENSORLG00000013135	-	95	63.313	ENSCANG00000036212	TUT4	58	63.777	Colobus_angolensis_palliatus
ENSORLG00000013135	-	95	64.331	ENSCGRG00001020315	-	57	65.342	Cricetulus_griseus_chok1gshd
ENSORLG00000013135	-	95	64.331	ENSCGRG00000017571	Tut4	57	65.342	Cricetulus_griseus_crigri
ENSORLG00000013135	-	100	75.441	ENSCSEG00000002476	TUT4	100	76.946	Cynoglossus_semilaevis
ENSORLG00000013135	-	100	75.959	ENSCVAG00000012659	TUT4	66	75.959	Cyprinodon_variegatus
ENSORLG00000013135	-	100	70.181	ENSDARG00000101404	CABZ01065131.1	100	70.482	Danio_rerio
ENSORLG00000013135	-	95	63.807	ENSDNOG00000013920	TUT4	57	64.275	Dasypus_novemcinctus
ENSORLG00000013135	-	95	64.873	ENSDORG00000027891	Tut4	57	65.348	Dipodomys_ordii
ENSORLG00000013135	-	58	63.760	ENSEBUG00000009834	TUT4	59	63.760	Eptatretus_burgeri
ENSORLG00000013135	-	96	63.411	ENSECAG00000021261	TUT4	57	64.678	Equus_caballus
ENSORLG00000013135	-	97	83.800	ENSELUG00000024167	TUT4	65	73.039	Esox_lucius
ENSORLG00000013135	-	95	64.275	ENSFCAG00000003246	TUT4	58	64.587	Felis_catus
ENSORLG00000013135	-	100	63.343	ENSFALG00000005607	TUT4	61	64.464	Ficedula_albicollis
ENSORLG00000013135	-	95	64.151	ENSFDAG00000016676	TUT4	57	64.521	Fukomys_damarensis
ENSORLG00000013135	-	95	75.576	ENSFHEG00000002296	-	99	75.883	Fundulus_heteroclitus
ENSORLG00000013135	-	95	69.749	ENSGMOG00000001281	TUT4	73	70.365	Gadus_morhua
ENSORLG00000013135	-	96	66.876	ENSGALG00000010629	TUT4	61	67.453	Gallus_gallus
ENSORLG00000013135	-	100	75.780	ENSGAFG00000011427	-	100	75.780	Gambusia_affinis
ENSORLG00000013135	-	95	77.812	ENSGACG00000005282	-	72	77.812	Gasterosteus_aculeatus
ENSORLG00000013135	-	96	62.362	ENSGAGG00000020531	TUT4	56	63.291	Gopherus_agassizii
ENSORLG00000013135	-	91	75.753	ENSHBUG00000008564	-	100	76.862	Haplochromis_burtoni
ENSORLG00000013135	-	95	64.151	ENSHGLG00000000804	TUT4	57	64.521	Heterocephalus_glaber_female
ENSORLG00000013135	-	95	64.151	ENSHGLG00100002051	TUT4	58	64.521	Heterocephalus_glaber_male
ENSORLG00000013135	-	100	70.044	ENSHCOG00000009746	-	100	70.044	Hippocampus_comes
ENSORLG00000013135	-	100	68.043	ENSIPUG00000002638	zcchc11	64	68.293	Ictalurus_punctatus
ENSORLG00000013135	-	95	64.623	ENSSTOG00000015611	TUT4	57	64.992	Ictidomys_tridecemlineatus
ENSORLG00000013135	-	100	78.614	ENSKMAG00000017970	TUT4	100	79.204	Kryptolebias_marmoratus
ENSORLG00000013135	-	100	78.116	ENSLBEG00000006518	TUT4	65	78.551	Labrus_bergylta
ENSORLG00000013135	-	100	63.583	ENSLACG00000010748	TUT4	58	63.730	Latimeria_chalumnae
ENSORLG00000013135	-	100	72.315	ENSLOCG00000006248	TUT4	69	72.315	Lepisosteus_oculatus
ENSORLG00000013135	-	95	64.119	ENSLAFG00000003763	TUT4	52	75.000	Loxodonta_africana
ENSORLG00000013135	-	95	63.963	ENSMFAG00000011842	TUT4	58	64.431	Macaca_fascicularis
ENSORLG00000013135	-	87	65.874	ENSMMUG00000017023	TUT4	56	66.384	Macaca_mulatta
ENSORLG00000013135	-	95	63.313	ENSMNEG00000009839	TUT4	61	63.777	Macaca_nemestrina
ENSORLG00000013135	-	95	63.963	ENSMLEG00000036158	TUT4	58	64.431	Mandrillus_leucophaeus
ENSORLG00000013135	-	100	78.947	ENSMAMG00000014890	TUT4	65	79.532	Mastacembelus_armatus
ENSORLG00000013135	-	100	77.193	ENSMZEG00005017227	TUT4	65	78.216	Maylandia_zebra
ENSORLG00000013135	-	95	67.036	ENSMGAG00000011185	TUT4	71	67.880	Meleagris_gallopavo
ENSORLG00000013135	-	95	64.062	ENSMICG00000015853	TUT4	57	64.375	Microcebus_murinus
ENSORLG00000013135	-	58	56.345	ENSMMOG00000017546	-	53	56.345	Mola_mola
ENSORLG00000013135	-	100	79.283	ENSMMOG00000016870	-	100	79.283	Mola_mola
ENSORLG00000013135	-	95	64.207	ENSMODG00000000618	TUT4	59	65.981	Monodelphis_domestica
ENSORLG00000013135	-	100	75.184	ENSMALG00000014488	-	100	74.336	Monopterus_albus
ENSORLG00000013135	-	95	63.738	MGP_CAROLIEiJ_G0026268	Tut4	57	65.440	Mus_caroli
ENSORLG00000013135	-	95	63.738	ENSMUSG00000034610	Tut4	57	65.440	Mus_musculus
ENSORLG00000013135	-	95	63.738	MGP_PahariEiJ_G0028601	Tut4	57	65.391	Mus_pahari
ENSORLG00000013135	-	95	63.578	MGP_SPRETEiJ_G0027237	Tut4	57	65.280	Mus_spretus
ENSORLG00000013135	-	95	64.274	ENSMPUG00000006880	TUT4	57	64.115	Mustela_putorius_furo
ENSORLG00000013135	-	95	63.027	ENSMLUG00000001067	TUT4	61	63.438	Myotis_lucifugus
ENSORLG00000013135	-	100	83.594	ENSNBRG00000005683	-	100	83.594	Neolamprologus_brichardi
ENSORLG00000013135	-	95	64.706	ENSNLEG00000017998	TUT4	58	65.183	Nomascus_leucogenys
ENSORLG00000013135	-	94	63.819	ENSMEUG00000003865	TUT4	56	64.754	Notamacropus_eugenii
ENSORLG00000013135	-	95	63.208	ENSODEG00000007328	TUT4	57	63.679	Octodon_degus
ENSORLG00000013135	-	100	77.485	ENSONIG00000019455	TUT4	72	79.219	Oreochromis_niloticus
ENSORLG00000013135	-	89	62.848	ENSOANG00000012864	TUT4	58	63.279	Ornithorhynchus_anatinus
ENSORLG00000013135	-	95	63.906	ENSOCUG00000002390	TUT4	58	64.219	Oryctolagus_cuniculus
ENSORLG00000013135	-	100	99.188	ENSORLG00020002631	-	100	99.188	Oryzias_latipes_hni
ENSORLG00000013135	-	100	96.955	ENSORLG00015001219	-	100	96.955	Oryzias_latipes_hsok
ENSORLG00000013135	-	100	88.732	ENSOMEG00000015574	-	100	88.732	Oryzias_melastigma
ENSORLG00000013135	-	95	62.442	ENSOGAG00000005425	TUT4	58	62.751	Otolemur_garnettii
ENSORLG00000013135	-	95	64.107	ENSOARG00000005494	TUT4	57	64.577	Ovis_aries
ENSORLG00000013135	-	95	63.313	ENSPPAG00000037653	TUT4	57	66.327	Pan_paniscus
ENSORLG00000013135	-	95	64.275	ENSPPRG00000020521	TUT4	58	64.587	Panthera_pardus
ENSORLG00000013135	-	95	64.275	ENSPTIG00000010511	TUT4	58	64.587	Panthera_tigris_altaica
ENSORLG00000013135	-	95	63.963	ENSPTRG00000000740	TUT4	58	64.431	Pan_troglodytes
ENSORLG00000013135	-	95	61.300	ENSPANG00000005042	TUT4	58	61.765	Papio_anubis
ENSORLG00000013135	-	100	69.322	ENSPKIG00000004670	TUT4	94	70.015	Paramormyrops_kingsleyae
ENSORLG00000013135	-	96	67.036	ENSPSIG00000016704	TUT4	59	67.036	Pelodiscus_sinensis
ENSORLG00000013135	-	60	63.904	ENSPMGG00000015621	-	66	63.904	Periophthalmus_magnuspinnatus
ENSORLG00000013135	-	100	61.730	ENSPCIG00000022380	TUT4	60	63.012	Phascolarctos_cinereus
ENSORLG00000013135	-	100	74.208	ENSPFOG00000002439	TUT4	69	72.230	Poecilia_formosa
ENSORLG00000013135	-	100	75.780	ENSPLAG00000008701	-	100	75.780	Poecilia_latipinna
ENSORLG00000013135	-	100	75.595	ENSPMEG00000006996	-	100	75.595	Poecilia_mexicana
ENSORLG00000013135	-	95	64.465	ENSPPYG00000001347	TUT4	58	64.678	Pongo_abelii
ENSORLG00000013135	-	95	92.994	ENSPCAG00000013380	TUT4	63	92.994	Procavia_capensis
ENSORLG00000013135	-	95	63.906	ENSPCOG00000007824	TUT4	60	64.219	Propithecus_coquereli
ENSORLG00000013135	-	95	63.950	ENSPVAG00000009804	TUT4	59	64.263	Pteropus_vampyrus
ENSORLG00000013135	-	100	77.339	ENSPNYG00000023175	TUT4	65	78.363	Pundamilia_nyererei
ENSORLG00000013135	-	100	69.185	ENSPNAG00000022786	TUT4	64	70.815	Pygocentrus_nattereri
ENSORLG00000013135	-	95	59.282	ENSRBIG00000027989	TUT4	58	59.750	Rhinopithecus_bieti
ENSORLG00000013135	-	96	63.622	ENSRROG00000034868	TUT4	68	64.431	Rhinopithecus_roxellana
ENSORLG00000013135	-	95	64.062	ENSSBOG00000013661	TUT4	58	64.375	Saimiri_boliviensis_boliviensis
ENSORLG00000013135	-	52	72.360	ENSSBOG00000020099	-	72	59.547	Saimiri_boliviensis_boliviensis
ENSORLG00000013135	-	95	64.537	ENSSHAG00000006231	TUT4	59	64.856	Sarcophilus_harrisii
ENSORLG00000013135	-	100	69.839	ENSSFOG00015013524	zcchc11	64	70.571	Scleropages_formosus
ENSORLG00000013135	-	100	77.810	ENSSMAG00000016072	TUT4	65	78.824	Scophthalmus_maximus
ENSORLG00000013135	-	100	81.606	ENSSDUG00000021923	TUT4	100	81.606	Seriola_dumerili
ENSORLG00000013135	-	100	81.752	ENSSLDG00000016071	TUT4	65	81.752	Seriola_lalandi_dorsalis
ENSORLG00000013135	-	100	58.285	ENSSPUG00000013287	TUT4	61	59.534	Sphenodon_punctatus
ENSORLG00000013135	-	100	71.742	ENSSPAG00000008141	-	100	73.246	Stegastes_partitus
ENSORLG00000013135	-	95	64.465	ENSSSCG00000003859	TUT4	58	64.275	Sus_scrofa
ENSORLG00000013135	-	96	67.460	ENSTGUG00000009011	TUT4	60	68.680	Taeniopygia_guttata
ENSORLG00000013135	-	63	69.746	ENSTRUG00000024719	-	98	70.070	Takifugu_rubripes
ENSORLG00000013135	-	95	63.807	ENSTTRG00000016142	TUT4	58	64.275	Tursiops_truncatus
ENSORLG00000013135	-	100	64.264	ENSUAMG00000000759	TUT4	64	78.626	Ursus_americanus
ENSORLG00000013135	-	95	63.291	ENSUMAG00000022669	TUT4	58	63.291	Ursus_maritimus
ENSORLG00000013135	-	95	60.781	ENSVPAG00000000910	TUT4	53	61.094	Vicugna_pacos
ENSORLG00000013135	-	100	64.110	ENSVVUG00000002703	TUT4	86	68.984	Vulpes_vulpes
ENSORLG00000013135	-	99	60.550	ENSXETG00000008061	tut4	70	61.621	Xenopus_tropicalis
ENSORLG00000013135	-	100	75.708	ENSXCOG00000007204	-	100	75.708	Xiphophorus_couchianus
ENSORLG00000013135	-	100	75.857	ENSXMAG00000000751	-	100	75.857	Xiphophorus_maculatus