EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000013472 (Gene tree)
Gene ID: 101166716
Gene Symbol: sf3b3
Alias: -
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 33256 bases
Position: chr6:25097929-25131184
Accession: 101166716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044032	CPSF_A	PF03178.15	4.5e-99	1	1
ENSORLP00000016900	CPSF_A	PF03178.15	3e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045230	-	5944	XM_023955973	ENSORLP00000044032	1217 (aa)	XP_023811741	UPI000CE23A5E
ENSORLT00000016901	-	3264	-	ENSORLP00000016900	1087 (aa)	-	H2ME96

Gene Model

Click here to download ENSORLG00000013472's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013472	sf3b3	100	93.180	ENSG00000189091	SF3B3	100	96.774	Homo_sapiens
ENSORLG00000013472	sf3b3	96	97.694	ENSAPOG00000006172	sf3b3	98	97.694	Acanthochromis_polyacanthus
ENSORLG00000013472	sf3b3	100	93.033	ENSAMEG00000002187	SF3B3	100	93.033	Ailuropoda_melanoleuca
ENSORLG00000013472	sf3b3	100	97.792	ENSACIG00000016487	sf3b3	100	97.792	Amphilophus_citrinellus
ENSORLG00000013472	sf3b3	100	97.617	ENSAOCG00000007158	sf3b3	100	97.617	Amphiprion_ocellaris
ENSORLG00000013472	sf3b3	100	97.617	ENSAPEG00000022786	sf3b3	100	97.617	Amphiprion_percula
ENSORLG00000013472	sf3b3	100	97.781	ENSATEG00000013708	sf3b3	100	97.781	Anabas_testudineus
ENSORLG00000013472	sf3b3	82	94.927	ENSAPLG00000004996	SF3B3	99	93.598	Anas_platyrhynchos
ENSORLG00000013472	sf3b3	100	93.426	ENSACAG00000001817	SF3B3	100	93.426	Anolis_carolinensis
ENSORLG00000013472	sf3b3	100	93.180	ENSANAG00000028001	SF3B3	100	93.180	Aotus_nancymaae
ENSORLG00000013472	sf3b3	100	97.332	ENSACLG00000022555	sf3b3	100	97.332	Astatotilapia_calliptera
ENSORLG00000013472	sf3b3	100	96.878	ENSAMXG00000003410	sf3b3	100	96.878	Astyanax_mexicanus
ENSORLG00000013472	sf3b3	100	93.180	ENSBTAG00000010627	SF3B3	100	93.180	Bos_taurus
ENSORLG00000013472	sf3b3	100	59.773	WBGene00019323	teg-4	100	59.773	Caenorhabditis_elegans
ENSORLG00000013472	sf3b3	100	93.180	ENSCJAG00000014773	SF3B3	99	93.180	Callithrix_jacchus
ENSORLG00000013472	sf3b3	100	93.262	ENSCAFG00000020151	SF3B3	100	93.262	Canis_familiaris
ENSORLG00000013472	sf3b3	100	93.262	ENSCAFG00020020912	SF3B3	100	93.262	Canis_lupus_dingo
ENSORLG00000013472	sf3b3	100	93.262	ENSCHIG00000019822	SF3B3	100	93.262	Capra_hircus
ENSORLG00000013472	sf3b3	100	93.180	ENSTSYG00000007910	SF3B3	100	93.180	Carlito_syrichta
ENSORLG00000013472	sf3b3	84	80.092	ENSCAPG00000001484	SF3B3	92	80.092	Cavia_aperea
ENSORLG00000013472	sf3b3	100	91.865	ENSCPOG00000000586	SF3B3	100	91.865	Cavia_porcellus
ENSORLG00000013472	sf3b3	100	93.180	ENSCCAG00000017736	SF3B3	100	93.180	Cebus_capucinus
ENSORLG00000013472	sf3b3	100	93.180	ENSCATG00000036562	SF3B3	100	93.180	Cercocebus_atys
ENSORLG00000013472	sf3b3	100	93.180	ENSCLAG00000003921	SF3B3	100	93.180	Chinchilla_lanigera
ENSORLG00000013472	sf3b3	100	93.180	ENSCSAG00000004371	SF3B3	100	93.180	Chlorocebus_sabaeus
ENSORLG00000013472	sf3b3	90	89.097	ENSCHOG00000001878	SF3B3	90	89.097	Choloepus_hoffmanni
ENSORLG00000013472	sf3b3	100	92.851	ENSCPBG00000015853	SF3B3	100	92.851	Chrysemys_picta_bellii
ENSORLG00000013472	sf3b3	100	79.721	ENSCING00000001342	-	100	79.721	Ciona_intestinalis
ENSORLG00000013472	sf3b3	99	78.079	ENSCSAVG00000011454	-	100	78.079	Ciona_savignyi
ENSORLG00000013472	sf3b3	100	89.647	ENSCANG00000042920	SF3B3	100	90.140	Colobus_angolensis_palliatus
ENSORLG00000013472	sf3b3	100	93.098	ENSCGRG00001015908	Sf3b3	100	93.098	Cricetulus_griseus_chok1gshd
ENSORLG00000013472	sf3b3	100	93.098	ENSCGRG00000010180	Sf3b3	100	93.098	Cricetulus_griseus_crigri
ENSORLG00000013472	sf3b3	83	95.912	ENSCSEG00000014192	sf3b3	99	96.108	Cynoglossus_semilaevis
ENSORLG00000013472	sf3b3	100	97.453	ENSCVAG00000010459	sf3b3	100	97.453	Cyprinodon_variegatus
ENSORLG00000013472	sf3b3	100	96.549	ENSDARG00000103553	sf3b3	100	96.549	Danio_rerio
ENSORLG00000013472	sf3b3	92	89.971	ENSDNOG00000043626	SF3B3	100	92.960	Dasypus_novemcinctus
ENSORLG00000013472	sf3b3	100	93.180	ENSDORG00000014176	Sf3b3	100	93.180	Dipodomys_ordii
ENSORLG00000013472	sf3b3	100	74.735	FBgn0035162	Sf3b3	100	74.735	Drosophila_melanogaster
ENSORLG00000013472	sf3b3	84	95.359	ENSETEG00000002729	SF3B3	84	95.359	Echinops_telfairi
ENSORLG00000013472	sf3b3	100	86.442	ENSEBUG00000006117	sf3b3	100	86.442	Eptatretus_burgeri
ENSORLG00000013472	sf3b3	100	93.262	ENSEASG00005013376	SF3B3	100	93.262	Equus_asinus_asinus
ENSORLG00000013472	sf3b3	100	93.262	ENSECAG00000014053	SF3B3	100	93.262	Equus_caballus
ENSORLG00000013472	sf3b3	93	92.632	ENSEEUG00000015611	SF3B3	93	92.632	Erinaceus_europaeus
ENSORLG00000013472	sf3b3	100	95.164	ENSELUG00000015417	sf3b3	100	95.164	Esox_lucius
ENSORLG00000013472	sf3b3	100	93.262	ENSFCAG00000009487	SF3B3	100	93.262	Felis_catus
ENSORLG00000013472	sf3b3	100	93.098	ENSFALG00000007372	SF3B3	100	93.098	Ficedula_albicollis
ENSORLG00000013472	sf3b3	100	93.180	ENSFDAG00000002608	SF3B3	100	93.180	Fukomys_damarensis
ENSORLG00000013472	sf3b3	100	98.028	ENSFHEG00000017824	sf3b3	100	98.028	Fundulus_heteroclitus
ENSORLG00000013472	sf3b3	100	93.268	ENSGMOG00000008139	sf3b3	100	93.268	Gadus_morhua
ENSORLG00000013472	sf3b3	100	93.344	ENSGALG00000002531	SF3B3	100	93.344	Gallus_gallus
ENSORLG00000013472	sf3b3	100	97.453	ENSGAFG00000015206	sf3b3	100	97.453	Gambusia_affinis
ENSORLG00000013472	sf3b3	100	97.701	ENSGACG00000002646	sf3b3	100	97.701	Gasterosteus_aculeatus
ENSORLG00000013472	sf3b3	96	93.083	ENSGAGG00000006746	SF3B3	97	93.083	Gopherus_agassizii
ENSORLG00000013472	sf3b3	100	93.180	ENSGGOG00000003246	SF3B3	100	93.180	Gorilla_gorilla
ENSORLG00000013472	sf3b3	100	93.284	ENSHBUG00000005960	sf3b3	100	93.284	Haplochromis_burtoni
ENSORLG00000013472	sf3b3	100	93.180	ENSHGLG00000010135	SF3B3	100	93.180	Heterocephalus_glaber_female
ENSORLG00000013472	sf3b3	100	91.079	ENSHGLG00100011148	SF3B3	100	91.079	Heterocephalus_glaber_male
ENSORLG00000013472	sf3b3	100	97.288	ENSHCOG00000011981	sf3b3	100	97.288	Hippocampus_comes
ENSORLG00000013472	sf3b3	100	96.960	ENSIPUG00000020435	sf3b3	100	96.960	Ictalurus_punctatus
ENSORLG00000013472	sf3b3	100	93.180	ENSSTOG00000007065	SF3B3	100	93.180	Ictidomys_tridecemlineatus
ENSORLG00000013472	sf3b3	100	93.180	ENSJJAG00000003948	Sf3b3	100	93.180	Jaculus_jaculus
ENSORLG00000013472	sf3b3	100	95.645	ENSKMAG00000004066	sf3b3	99	97.780	Kryptolebias_marmoratus
ENSORLG00000013472	sf3b3	100	97.946	ENSLBEG00000018302	sf3b3	100	97.946	Labrus_bergylta
ENSORLG00000013472	sf3b3	98	89.867	ENSLACG00000012501	SF3B3	99	89.867	Latimeria_chalumnae
ENSORLG00000013472	sf3b3	100	96.305	ENSLOCG00000007566	sf3b3	100	96.305	Lepisosteus_oculatus
ENSORLG00000013472	sf3b3	100	93.262	ENSLAFG00000012219	SF3B3	100	93.262	Loxodonta_africana
ENSORLG00000013472	sf3b3	100	93.180	ENSMFAG00000045487	SF3B3	100	93.180	Macaca_fascicularis
ENSORLG00000013472	sf3b3	100	93.180	ENSMMUG00000017812	SF3B3	100	93.180	Macaca_mulatta
ENSORLG00000013472	sf3b3	100	93.180	ENSMNEG00000033385	SF3B3	100	93.180	Macaca_nemestrina
ENSORLG00000013472	sf3b3	100	89.647	ENSMLEG00000043891	SF3B3	100	89.647	Mandrillus_leucophaeus
ENSORLG00000013472	sf3b3	100	98.028	ENSMAMG00000016837	sf3b3	100	98.028	Mastacembelus_armatus
ENSORLG00000013472	sf3b3	96	97.328	ENSMZEG00005026015	sf3b3	99	97.328	Maylandia_zebra
ENSORLG00000013472	sf3b3	100	97.453	ENSMZEG00005010836	sf3b3	100	97.453	Maylandia_zebra
ENSORLG00000013472	sf3b3	100	93.344	ENSMGAG00000001597	SF3B3	100	93.344	Meleagris_gallopavo
ENSORLG00000013472	sf3b3	81	76.280	ENSMAUG00000013618	Sf3b3	95	76.654	Mesocricetus_auratus
ENSORLG00000013472	sf3b3	100	92.125	ENSMICG00000001363	SF3B3	100	92.125	Microcebus_murinus
ENSORLG00000013472	sf3b3	100	93.098	ENSMOCG00000006108	Sf3b3	100	93.098	Microtus_ochrogaster
ENSORLG00000013472	sf3b3	96	97.805	ENSMMOG00000002598	sf3b3	97	97.805	Mola_mola
ENSORLG00000013472	sf3b3	100	89.163	ENSMODG00000014363	SF3B3	100	89.163	Monodelphis_domestica
ENSORLG00000013472	sf3b3	100	97.288	ENSMALG00000008014	sf3b3	100	97.288	Monopterus_albus
ENSORLG00000013472	sf3b3	100	93.098	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.098	Mus_caroli
ENSORLG00000013472	sf3b3	100	93.098	ENSMUSG00000033732	Sf3b3	100	93.098	Mus_musculus
ENSORLG00000013472	sf3b3	100	93.098	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.098	Mus_spretus
ENSORLG00000013472	sf3b3	100	93.262	ENSMPUG00000010277	SF3B3	100	93.262	Mustela_putorius_furo
ENSORLG00000013472	sf3b3	100	93.098	ENSMLUG00000014607	SF3B3	100	93.098	Myotis_lucifugus
ENSORLG00000013472	sf3b3	100	93.180	ENSNGAG00000021903	Sf3b3	100	93.180	Nannospalax_galili
ENSORLG00000013472	sf3b3	90	94.444	ENSNBRG00000007197	sf3b3	99	94.444	Neolamprologus_brichardi
ENSORLG00000013472	sf3b3	100	91.708	ENSNLEG00000016127	SF3B3	100	91.708	Nomascus_leucogenys
ENSORLG00000013472	sf3b3	92	89.008	ENSMEUG00000004479	SF3B3	94	89.008	Notamacropus_eugenii
ENSORLG00000013472	sf3b3	98	90.025	ENSOPRG00000009847	SF3B3	100	90.025	Ochotona_princeps
ENSORLG00000013472	sf3b3	100	93.180	ENSODEG00000014154	SF3B3	100	93.180	Octodon_degus
ENSORLG00000013472	sf3b3	100	97.535	ENSONIG00000011198	sf3b3	100	97.535	Oreochromis_niloticus
ENSORLG00000013472	sf3b3	100	93.344	ENSOANG00000001161	-	100	93.344	Ornithorhynchus_anatinus
ENSORLG00000013472	sf3b3	100	91.290	ENSOCUG00000004139	SF3B3	100	91.290	Oryctolagus_cuniculus
ENSORLG00000013472	sf3b3	100	100.000	ENSORLG00020017473	sf3b3	100	100.000	Oryzias_latipes_hni
ENSORLG00000013472	sf3b3	100	99.836	ENSORLG00015007710	sf3b3	100	99.836	Oryzias_latipes_hsok
ENSORLG00000013472	sf3b3	100	99.096	ENSOMEG00000014483	sf3b3	100	99.096	Oryzias_melastigma
ENSORLG00000013472	sf3b3	100	92.869	ENSOGAG00000016051	SF3B3	100	92.869	Otolemur_garnettii
ENSORLG00000013472	sf3b3	100	93.033	ENSOARG00000004816	SF3B3	100	93.033	Ovis_aries
ENSORLG00000013472	sf3b3	100	93.180	ENSPPAG00000026807	SF3B3	100	93.180	Pan_paniscus
ENSORLG00000013472	sf3b3	100	93.262	ENSPPRG00000001686	SF3B3	100	93.262	Panthera_pardus
ENSORLG00000013472	sf3b3	97	93.264	ENSPTIG00000020382	SF3B3	100	93.264	Panthera_tigris_altaica
ENSORLG00000013472	sf3b3	100	93.180	ENSPTRG00000008308	SF3B3	100	93.180	Pan_troglodytes
ENSORLG00000013472	sf3b3	100	93.180	ENSPANG00000024075	SF3B3	100	93.180	Papio_anubis
ENSORLG00000013472	sf3b3	100	96.385	ENSPKIG00000002712	sf3b3	100	96.385	Paramormyrops_kingsleyae
ENSORLG00000013472	sf3b3	97	90.248	ENSPSIG00000002232	SF3B3	100	93.100	Pelodiscus_sinensis
ENSORLG00000013472	sf3b3	100	93.098	ENSPEMG00000008603	Sf3b3	100	93.098	Peromyscus_maniculatus_bairdii
ENSORLG00000013472	sf3b3	100	90.058	ENSPMAG00000001793	sf3b3	100	90.058	Petromyzon_marinus
ENSORLG00000013472	sf3b3	100	93.344	ENSPCIG00000014927	SF3B3	100	93.344	Phascolarctos_cinereus
ENSORLG00000013472	sf3b3	100	97.699	ENSPFOG00000015516	sf3b3	100	97.699	Poecilia_formosa
ENSORLG00000013472	sf3b3	100	97.699	ENSPLAG00000014330	sf3b3	100	97.699	Poecilia_latipinna
ENSORLG00000013472	sf3b3	100	97.781	ENSPMEG00000019856	sf3b3	100	97.781	Poecilia_mexicana
ENSORLG00000013472	sf3b3	82	97.630	ENSPREG00000019669	sf3b3	97	97.663	Poecilia_reticulata
ENSORLG00000013472	sf3b3	95	94.595	ENSPPYG00000007539	SF3B3	100	92.892	Pongo_abelii
ENSORLG00000013472	sf3b3	100	72.638	ENSPCAG00000002623	SF3B3	100	72.638	Procavia_capensis
ENSORLG00000013472	sf3b3	84	96.262	ENSPCOG00000026582	SF3B3	100	96.262	Propithecus_coquereli
ENSORLG00000013472	sf3b3	100	93.180	ENSPVAG00000000684	SF3B3	100	93.180	Pteropus_vampyrus
ENSORLG00000013472	sf3b3	100	97.535	ENSPNYG00000003528	sf3b3	100	97.535	Pundamilia_nyererei
ENSORLG00000013472	sf3b3	100	96.467	ENSPNAG00000015419	sf3b3	100	96.467	Pygocentrus_nattereri
ENSORLG00000013472	sf3b3	100	93.098	ENSRNOG00000017724	Sf3b3	100	93.098	Rattus_norvegicus
ENSORLG00000013472	sf3b3	100	93.180	ENSRBIG00000021904	SF3B3	100	93.180	Rhinopithecus_bieti
ENSORLG00000013472	sf3b3	100	93.180	ENSRROG00000045703	SF3B3	100	93.180	Rhinopithecus_roxellana
ENSORLG00000013472	sf3b3	81	43.548	YML049C	-	75	43.548	Saccharomyces_cerevisiae
ENSORLG00000013472	sf3b3	100	93.180	ENSSBOG00000029156	SF3B3	100	93.180	Saimiri_boliviensis_boliviensis
ENSORLG00000013472	sf3b3	100	93.344	ENSSHAG00000000372	SF3B3	100	93.344	Sarcophilus_harrisii
ENSORLG00000013472	sf3b3	100	96.964	ENSSFOG00015012877	sf3b3	100	96.964	Scleropages_formosus
ENSORLG00000013472	sf3b3	100	96.960	ENSSMAG00000014386	sf3b3	100	96.960	Scophthalmus_maximus
ENSORLG00000013472	sf3b3	100	97.781	ENSSDUG00000021201	sf3b3	100	97.781	Seriola_dumerili
ENSORLG00000013472	sf3b3	100	97.699	ENSSLDG00000017532	sf3b3	100	97.699	Seriola_lalandi_dorsalis
ENSORLG00000013472	sf3b3	93	93.290	ENSSARG00000006917	SF3B3	93	93.290	Sorex_araneus
ENSORLG00000013472	sf3b3	100	93.180	ENSSPUG00000006253	SF3B3	100	93.180	Sphenodon_punctatus
ENSORLG00000013472	sf3b3	100	89.893	ENSSPAG00000003125	sf3b3	100	89.893	Stegastes_partitus
ENSORLG00000013472	sf3b3	100	93.376	ENSSSCG00000025323	SF3B3	100	93.376	Sus_scrofa
ENSORLG00000013472	sf3b3	100	93.268	ENSTGUG00000006082	SF3B3	100	93.268	Taeniopygia_guttata
ENSORLG00000013472	sf3b3	61	80.577	ENSTRUG00000015623	sf3b3	96	80.577	Takifugu_rubripes
ENSORLG00000013472	sf3b3	89	97.151	ENSTNIG00000004857	sf3b3	100	97.151	Tetraodon_nigroviridis
ENSORLG00000013472	sf3b3	93	79.313	ENSTBEG00000002946	SF3B3	100	79.313	Tupaia_belangeri
ENSORLG00000013472	sf3b3	100	92.523	ENSTTRG00000005855	SF3B3	100	92.523	Tursiops_truncatus
ENSORLG00000013472	sf3b3	100	93.262	ENSUAMG00000006780	SF3B3	100	93.262	Ursus_americanus
ENSORLG00000013472	sf3b3	100	93.262	ENSUMAG00000017757	SF3B3	100	93.262	Ursus_maritimus
ENSORLG00000013472	sf3b3	100	78.225	ENSVPAG00000003202	SF3B3	100	78.225	Vicugna_pacos
ENSORLG00000013472	sf3b3	100	93.262	ENSVVUG00000017922	SF3B3	100	93.262	Vulpes_vulpes
ENSORLG00000013472	sf3b3	100	93.673	ENSXETG00000032869	SF3B3	100	93.673	Xenopus_tropicalis
ENSORLG00000013472	sf3b3	78	98.104	ENSXCOG00000013628	sf3b3	97	97.983	Xiphophorus_couchianus
ENSORLG00000013472	sf3b3	100	97.535	ENSXMAG00000006334	sf3b3	100	97.535	Xiphophorus_maculatus