EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000013492 (Gene tree)
Gene ID: 101165345
Gene Symbol: chd7
Alias: -
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 84135 bases
Position: chr17:20967899-21052033
Accession: 101165345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000016920	ResIII	PF04851.15	1.2e-05	1	1
ENSORLP00000016920	BRK	PF07533.16	4.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000016921	-	12483	XM_023965274	ENSORLP00000016920	3307 (aa)	XP_023821042	H2MEB5

Gene Model

Click here to download ENSORLG00000013492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000013492	chd7	59	69.143	ENSORLG00000013810	chd9	80	64.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013492	chd7	68	79.103	ENSG00000171316	CHD7	97	64.516	Homo_sapiens
ENSORLG00000013492	chd7	75	85.459	ENSAPOG00000009351	chd7	98	88.064	Acanthochromis_polyacanthus
ENSORLG00000013492	chd7	68	80.528	ENSAMEG00000005699	CHD7	71	78.740	Ailuropoda_melanoleuca
ENSORLG00000013492	chd7	67	93.274	ENSACIG00000001590	chd7	98	93.274	Amphilophus_citrinellus
ENSORLG00000013492	chd7	72	84.723	ENSAOCG00000002337	chd7	93	93.003	Amphiprion_ocellaris
ENSORLG00000013492	chd7	98	83.536	ENSAPEG00000010332	chd7	98	84.977	Amphiprion_percula
ENSORLG00000013492	chd7	68	86.448	ENSATEG00000002590	chd7	60	86.438	Anabas_testudineus
ENSORLG00000013492	chd7	50	79.229	ENSAPLG00000005873	CHD7	75	69.772	Anas_platyrhynchos
ENSORLG00000013492	chd7	69	78.521	ENSACAG00000005760	CHD7	72	71.336	Anolis_carolinensis
ENSORLG00000013492	chd7	67	79.103	ENSANAG00000035300	CHD7	71	72.000	Aotus_nancymaae
ENSORLG00000013492	chd7	68	80.313	ENSBTAG00000021841	CHD7	77	72.335	Bos_taurus
ENSORLG00000013492	chd7	68	79.103	ENSCJAG00000009025	CHD7	71	72.215	Callithrix_jacchus
ENSORLG00000013492	chd7	70	79.343	ENSCAFG00000007167	CHD7	71	78.504	Canis_familiaris
ENSORLG00000013492	chd7	70	78.383	ENSCAFG00020015856	CHD7	71	77.323	Canis_lupus_dingo
ENSORLG00000013492	chd7	68	80.611	ENSCHIG00000011729	CHD7	72	72.757	Capra_hircus
ENSORLG00000013492	chd7	67	80.033	ENSTSYG00000004018	CHD7	71	71.953	Carlito_syrichta
ENSORLG00000013492	chd7	50	60.512	ENSCAPG00000016749	CHD8	60	62.460	Cavia_aperea
ENSORLG00000013492	chd7	69	74.139	ENSCAPG00000007952	CHD7	71	75.000	Cavia_aperea
ENSORLG00000013492	chd7	69	79.057	ENSCPOG00000013385	CHD7	71	78.538	Cavia_porcellus
ENSORLG00000013492	chd7	50	66.392	ENSCPOG00000002538	CHD8	60	68.834	Cavia_porcellus
ENSORLG00000013492	chd7	67	79.280	ENSCCAG00000025831	CHD7	71	72.215	Cebus_capucinus
ENSORLG00000013492	chd7	68	79.103	ENSCATG00000020229	CHD7	71	72.280	Cercocebus_atys
ENSORLG00000013492	chd7	67	78.834	ENSCLAG00000004679	CHD7	72	72.222	Chinchilla_lanigera
ENSORLG00000013492	chd7	68	79.023	ENSCSAG00000014349	CHD7	72	72.120	Chlorocebus_sabaeus
ENSORLG00000013492	chd7	80	81.210	ENSCPBG00000021517	CHD7	94	79.822	Chrysemys_picta_bellii
ENSORLG00000013492	chd7	68	78.943	ENSCANG00000041382	CHD7	71	72.149	Colobus_angolensis_palliatus
ENSORLG00000013492	chd7	68	79.360	ENSCGRG00001011949	Chd7	72	72.201	Cricetulus_griseus_chok1gshd
ENSORLG00000013492	chd7	68	74.194	ENSCGRG00000000481	Chd7	68	73.936	Cricetulus_griseus_crigri
ENSORLG00000013492	chd7	71	83.333	ENSCSEG00000017886	chd7	96	82.818	Cynoglossus_semilaevis
ENSORLG00000013492	chd7	98	82.202	ENSCVAG00000017584	chd7	99	82.844	Cyprinodon_variegatus
ENSORLG00000013492	chd7	75	70.311	ENSDARG00000075211	chd7	95	69.667	Danio_rerio
ENSORLG00000013492	chd7	67	79.183	ENSDNOG00000011674	CHD7	71	78.346	Dasypus_novemcinctus
ENSORLG00000013492	chd7	68	78.918	ENSDORG00000003515	Chd7	72	71.708	Dipodomys_ordii
ENSORLG00000013492	chd7	54	76.287	ENSETEG00000016689	-	56	77.129	Echinops_telfairi
ENSORLG00000013492	chd7	58	68.023	ENSEBUG00000007607	chd8	63	69.593	Eptatretus_burgeri
ENSORLG00000013492	chd7	69	79.409	ENSEASG00005016258	CHD7	71	78.571	Equus_asinus_asinus
ENSORLG00000013492	chd7	50	62.009	ENSECAG00000016102	CHD8	61	69.102	Equus_caballus
ENSORLG00000013492	chd7	73	79.409	ENSECAG00000001445	CHD7	88	78.571	Equus_caballus
ENSORLG00000013492	chd7	75	83.631	ENSEEUG00000013559	CHD7	77	77.820	Erinaceus_europaeus
ENSORLG00000013492	chd7	82	79.127	ENSELUG00000024442	chd7	95	77.357	Esox_lucius
ENSORLG00000013492	chd7	69	79.346	ENSFCAG00000003849	CHD7	70	78.931	Felis_catus
ENSORLG00000013492	chd7	70	69.914	ENSFALG00000005570	CHD7	74	69.833	Ficedula_albicollis
ENSORLG00000013492	chd7	68	80.329	ENSFDAG00000000528	CHD7	72	72.190	Fukomys_damarensis
ENSORLG00000013492	chd7	98	82.335	ENSFHEG00000001311	chd7	98	82.656	Fundulus_heteroclitus
ENSORLG00000013492	chd7	51	85.240	ENSGMOG00000004232	chd7	92	85.263	Gadus_morhua
ENSORLG00000013492	chd7	67	79.386	ENSGALG00000041080	CHD7	51	66.832	Gallus_gallus
ENSORLG00000013492	chd7	80	83.749	ENSGAFG00000006858	chd7	95	84.702	Gambusia_affinis
ENSORLG00000013492	chd7	66	84.790	ENSGACG00000014897	chd7	99	74.792	Gasterosteus_aculeatus
ENSORLG00000013492	chd7	76	80.576	ENSGAGG00000017996	CHD7	94	79.733	Gopherus_agassizii
ENSORLG00000013492	chd7	69	79.183	ENSGGOG00000012224	CHD7	72	72.346	Gorilla_gorilla
ENSORLG00000013492	chd7	77	83.107	ENSHBUG00000019225	chd7	99	81.936	Haplochromis_burtoni
ENSORLG00000013492	chd7	68	80.231	ENSHGLG00000017268	CHD7	71	72.186	Heterocephalus_glaber_female
ENSORLG00000013492	chd7	68	80.231	ENSHGLG00100015649	CHD7	72	72.186	Heterocephalus_glaber_male
ENSORLG00000013492	chd7	97	77.580	ENSHCOG00000014380	chd7	98	80.480	Hippocampus_comes
ENSORLG00000013492	chd7	50	64.808	ENSIPUG00000019891	chd8	63	64.117	Ictalurus_punctatus
ENSORLG00000013492	chd7	65	80.328	ENSIPUG00000007585	chd7	95	73.565	Ictalurus_punctatus
ENSORLG00000013492	chd7	69	79.103	ENSSTOG00000011949	CHD7	72	72.000	Ictidomys_tridecemlineatus
ENSORLG00000013492	chd7	56	66.792	ENSSTOG00000001854	CHD8	61	69.102	Ictidomys_tridecemlineatus
ENSORLG00000013492	chd7	67	79.280	ENSJJAG00000022064	Chd7	71	78.442	Jaculus_jaculus
ENSORLG00000013492	chd7	98	83.277	ENSKMAG00000009724	chd7	99	82.918	Kryptolebias_marmoratus
ENSORLG00000013492	chd7	99	79.885	ENSLBEG00000020842	chd7	98	79.602	Labrus_bergylta
ENSORLG00000013492	chd7	50	66.903	ENSLACG00000011367	CHD8	67	66.071	Latimeria_chalumnae
ENSORLG00000013492	chd7	64	72.269	ENSLACG00000002461	CHD7	98	54.477	Latimeria_chalumnae
ENSORLG00000013492	chd7	50	75.197	ENSLOCG00000005062	chd7	96	60.504	Lepisosteus_oculatus
ENSORLG00000013492	chd7	67	79.153	ENSLAFG00000000403	CHD7	71	78.571	Loxodonta_africana
ENSORLG00000013492	chd7	68	79.103	ENSMFAG00000041825	CHD7	84	78.442	Macaca_fascicularis
ENSORLG00000013492	chd7	68	79.103	ENSMMUG00000011584	CHD7	71	72.280	Macaca_mulatta
ENSORLG00000013492	chd7	67	79.103	ENSMNEG00000040978	CHD7	71	72.280	Macaca_nemestrina
ENSORLG00000013492	chd7	68	79.103	ENSMLEG00000038817	CHD7	71	72.280	Mandrillus_leucophaeus
ENSORLG00000013492	chd7	98	80.461	ENSMAMG00000011569	chd7	98	80.476	Mastacembelus_armatus
ENSORLG00000013492	chd7	77	83.068	ENSMZEG00005010646	chd7	99	81.876	Maylandia_zebra
ENSORLG00000013492	chd7	67	79.308	ENSMGAG00000011092	CHD7	51	55.311	Meleagris_gallopavo
ENSORLG00000013492	chd7	65	81.436	ENSMAUG00000001000	Chd7	69	73.692	Mesocricetus_auratus
ENSORLG00000013492	chd7	69	79.103	ENSMICG00000002430	CHD7	71	78.521	Microcebus_murinus
ENSORLG00000013492	chd7	68	79.330	ENSMOCG00000011408	Chd7	71	78.493	Microtus_ochrogaster
ENSORLG00000013492	chd7	71	79.213	ENSMODG00000008488	CHD7	72	72.656	Monodelphis_domestica
ENSORLG00000013492	chd7	74	82.646	ENSMALG00000004389	chd7	98	84.028	Monopterus_albus
ENSORLG00000013492	chd7	87	79.409	MGP_CAROLIEiJ_G0025797	Chd7	71	78.571	Mus_caroli
ENSORLG00000013492	chd7	68	79.280	ENSMUSG00000041235	Chd7	71	78.442	Mus_musculus
ENSORLG00000013492	chd7	68	79.280	MGP_PahariEiJ_G0023920	Chd7	71	78.442	Mus_pahari
ENSORLG00000013492	chd7	68	79.409	MGP_SPRETEiJ_G0026745	Chd7	71	78.571	Mus_spretus
ENSORLG00000013492	chd7	56	80.528	ENSMPUG00000002338	CHD7	75	78.678	Mustela_putorius_furo
ENSORLG00000013492	chd7	67	77.906	ENSMLUG00000015266	CHD7	71	76.404	Myotis_lucifugus
ENSORLG00000013492	chd7	92	60.700	ENSNGAG00000010767	Chd7	72	72.168	Nannospalax_galili
ENSORLG00000013492	chd7	75	78.835	ENSNBRG00000001280	chd7	96	79.057	Neolamprologus_brichardi
ENSORLG00000013492	chd7	68	79.023	ENSNLEG00000002027	CHD7	94	56.901	Nomascus_leucogenys
ENSORLG00000013492	chd7	74	74.370	ENSMEUG00000010045	CHD7	78	73.810	Notamacropus_eugenii
ENSORLG00000013492	chd7	68	78.712	ENSODEG00000002424	CHD7	72	72.251	Octodon_degus
ENSORLG00000013492	chd7	96	79.662	ENSONIG00000016614	chd7	100	76.565	Oreochromis_niloticus
ENSORLG00000013492	chd7	68	80.446	ENSOCUG00000010034	CHD7	89	78.521	Oryctolagus_cuniculus
ENSORLG00000013492	chd7	100	99.185	ENSORLG00020020002	chd7	100	99.185	Oryzias_latipes_hni
ENSORLG00000013492	chd7	100	98.974	ENSORLG00015020858	chd7	100	98.974	Oryzias_latipes_hsok
ENSORLG00000013492	chd7	100	95.870	ENSOMEG00000016881	chd7	100	95.870	Oryzias_melastigma
ENSORLG00000013492	chd7	69	79.313	ENSOGAG00000013905	CHD7	71	78.728	Otolemur_garnettii
ENSORLG00000013492	chd7	69	72.476	ENSOARG00000016176	CHD7	70	78.425	Ovis_aries
ENSORLG00000013492	chd7	51	66.244	ENSPPAG00000039987	CHD8	61	68.666	Pan_paniscus
ENSORLG00000013492	chd7	69	79.103	ENSPPAG00000033330	CHD7	72	72.280	Pan_paniscus
ENSORLG00000013492	chd7	69	79.409	ENSPPRG00000022248	CHD7	71	78.397	Panthera_pardus
ENSORLG00000013492	chd7	65	78.389	ENSPTIG00000011702	CHD7	69	77.973	Panthera_tigris_altaica
ENSORLG00000013492	chd7	68	79.103	ENSPTRG00000020286	CHD7	72	72.280	Pan_troglodytes
ENSORLG00000013492	chd7	68	79.103	ENSPANG00000018419	CHD7	71	72.280	Papio_anubis
ENSORLG00000013492	chd7	50	64.403	ENSPKIG00000009142	chd8	63	64.342	Paramormyrops_kingsleyae
ENSORLG00000013492	chd7	70	79.744	ENSPSIG00000012003	CHD7	72	72.120	Pelodiscus_sinensis
ENSORLG00000013492	chd7	69	85.838	ENSPMGG00000018543	chd7	93	84.784	Periophthalmus_magnuspinnatus
ENSORLG00000013492	chd7	67	80.348	ENSPEMG00000023028	Chd7	72	72.599	Peromyscus_maniculatus_bairdii
ENSORLG00000013492	chd7	70	80.378	ENSPCIG00000000025	-	90	69.150	Phascolarctos_cinereus
ENSORLG00000013492	chd7	99	82.057	ENSPFOG00000004891	chd7	99	97.403	Poecilia_formosa
ENSORLG00000013492	chd7	58	63.360	ENSPFOG00000010939	-	92	64.540	Poecilia_formosa
ENSORLG00000013492	chd7	99	82.044	ENSPLAG00000023322	chd7	98	82.905	Poecilia_latipinna
ENSORLG00000013492	chd7	75	85.207	ENSPMEG00000005879	chd7	96	77.798	Poecilia_mexicana
ENSORLG00000013492	chd7	50	92.999	ENSPREG00000014744	chd7	96	77.132	Poecilia_reticulata
ENSORLG00000013492	chd7	70	78.504	ENSPPYG00000018618	CHD7	72	72.280	Pongo_abelii
ENSORLG00000013492	chd7	76	76.404	ENSPCAG00000000227	CHD7	69	76.404	Procavia_capensis
ENSORLG00000013492	chd7	69	78.703	ENSPCOG00000013850	CHD7	71	78.285	Propithecus_coquereli
ENSORLG00000013492	chd7	86	81.896	ENSPVAG00000011873	CHD7	66	81.801	Pteropus_vampyrus
ENSORLG00000013492	chd7	73	85.525	ENSPNYG00000012490	chd7	98	85.525	Pundamilia_nyererei
ENSORLG00000013492	chd7	91	66.818	ENSRNOG00000006689	Chd7	72	72.382	Rattus_norvegicus
ENSORLG00000013492	chd7	68	77.885	ENSRBIG00000043575	CHD7	71	71.391	Rhinopithecus_bieti
ENSORLG00000013492	chd7	68	79.200	ENSRROG00000008981	CHD7	71	72.625	Rhinopithecus_roxellana
ENSORLG00000013492	chd7	68	79.103	ENSSBOG00000021462	CHD7	71	72.215	Saimiri_boliviensis_boliviensis
ENSORLG00000013492	chd7	54	67.584	ENSSHAG00000008118	CHD8	59	68.944	Sarcophilus_harrisii
ENSORLG00000013492	chd7	69	79.134	ENSSHAG00000011522	CHD7	72	72.396	Sarcophilus_harrisii
ENSORLG00000013492	chd7	67	75.804	ENSSFOG00015015077	chd7	69	77.174	Scleropages_formosus
ENSORLG00000013492	chd7	50	77.811	ENSSMAG00000001030	chd7	92	74.651	Scophthalmus_maximus
ENSORLG00000013492	chd7	98	81.490	ENSSDUG00000013773	chd7	98	82.141	Seriola_dumerili
ENSORLG00000013492	chd7	52	81.269	ENSSARG00000003387	CHD7	67	82.299	Sorex_araneus
ENSORLG00000013492	chd7	75	77.655	ENSSPUG00000009235	CHD7	90	70.323	Sphenodon_punctatus
ENSORLG00000013492	chd7	76	84.736	ENSSPAG00000006320	chd7	98	84.505	Stegastes_partitus
ENSORLG00000013492	chd7	68	80.611	ENSSSCG00000006231	CHD7	72	72.299	Sus_scrofa
ENSORLG00000013492	chd7	63	72.824	ENSTGUG00000011196	CHD7	71	72.608	Taeniopygia_guttata
ENSORLG00000013492	chd7	67	78.619	ENSTRUG00000008632	chd7	98	79.477	Takifugu_rubripes
ENSORLG00000013492	chd7	58	89.560	ENSTNIG00000002647	chd7	98	81.176	Tetraodon_nigroviridis
ENSORLG00000013492	chd7	64	76.965	ENSTTRG00000004221	CHD7	67	76.330	Tursiops_truncatus
ENSORLG00000013492	chd7	68	79.752	ENSUAMG00000025734	CHD7	94	76.966	Ursus_americanus
ENSORLG00000013492	chd7	74	75.392	ENSUMAG00000010436	CHD7	87	76.981	Ursus_maritimus
ENSORLG00000013492	chd7	55	66.170	ENSUMAG00000004045	CHD8	72	72.711	Ursus_maritimus
ENSORLG00000013492	chd7	70	79.263	ENSVVUG00000018063	CHD7	71	78.425	Vulpes_vulpes
ENSORLG00000013492	chd7	75	67.454	ENSXETG00000026004	chd8	75	72.382	Xenopus_tropicalis
ENSORLG00000013492	chd7	99	82.005	ENSXMAG00000018590	chd7	98	83.144	Xiphophorus_maculatus