EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000013500 (Gene tree)
Gene ID: 101160278
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3564 bases
Position: chr23:13640538-13644101
Accession: 101160278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000016925	MRP-S32	PF10210.9	2.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000016926	-	777	XM_004083017	ENSORLP00000016925	170 (aa)	XP_004083065	H2MEC0

Gene Model

Click here to download ENSORLG00000013500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013500	mrpl42	85	70.068	ENSAPOG00000010677	mrpl42	100	70.068	Acanthochromis_polyacanthus
ENSORLG00000013500	mrpl42	85	71.918	ENSAOCG00000011620	mrpl42	100	71.918	Amphiprion_ocellaris
ENSORLG00000013500	mrpl42	85	72.603	ENSAPEG00000019516	mrpl42	100	72.603	Amphiprion_percula
ENSORLG00000013500	mrpl42	77	71.212	ENSATEG00000014106	mrpl42	100	71.212	Anabas_testudineus
ENSORLG00000013500	mrpl42	58	69.697	ENSACAG00000012606	MRPL42	68	69.697	Anolis_carolinensis
ENSORLG00000013500	mrpl42	85	69.655	ENSACLG00000026856	mrpl42	100	69.655	Astatotilapia_calliptera
ENSORLG00000013500	mrpl42	56	55.670	ENSAMXG00000035149	mrpl42	71	55.670	Astyanax_mexicanus
ENSORLG00000013500	mrpl42	85	63.699	ENSCSEG00000010067	mrpl42	98	64.583	Cynoglossus_semilaevis
ENSORLG00000013500	mrpl42	85	71.918	ENSCVAG00000002612	mrpl42	100	71.918	Cyprinodon_variegatus
ENSORLG00000013500	mrpl42	85	51.370	ENSDARG00000079391	mrpl42	100	52.381	Danio_rerio
ENSORLG00000013500	mrpl42	58	45.714	ENSEBUG00000005581	mrpl42	78	45.714	Eptatretus_burgeri
ENSORLG00000013500	mrpl42	86	58.784	ENSELUG00000001973	mrpl42	100	58.784	Esox_lucius
ENSORLG00000013500	mrpl42	85	66.438	ENSFHEG00000018696	mrpl42	100	66.438	Fundulus_heteroclitus
ENSORLG00000013500	mrpl42	56	75.258	ENSGMOG00000002972	mrpl42	100	75.258	Gadus_morhua
ENSORLG00000013500	mrpl42	85	67.808	ENSGAFG00000018373	mrpl42	100	67.808	Gambusia_affinis
ENSORLG00000013500	mrpl42	56	81.250	ENSGACG00000018811	mrpl42	99	81.250	Gasterosteus_aculeatus
ENSORLG00000013500	mrpl42	85	68.276	ENSHBUG00000015960	mrpl42	100	68.276	Haplochromis_burtoni
ENSORLG00000013500	mrpl42	85	60.959	ENSHCOG00000014046	mrpl42	100	60.959	Hippocampus_comes
ENSORLG00000013500	mrpl42	58	59.596	ENSIPUG00000015395	mrpl42	96	48.227	Ictalurus_punctatus
ENSORLG00000013500	mrpl42	85	67.808	ENSKMAG00000013671	mrpl42	100	67.808	Kryptolebias_marmoratus
ENSORLG00000013500	mrpl42	86	66.892	ENSLBEG00000028618	mrpl42	99	67.808	Labrus_bergylta
ENSORLG00000013500	mrpl42	85	69.863	ENSMAMG00000009737	mrpl42	100	69.863	Mastacembelus_armatus
ENSORLG00000013500	mrpl42	85	69.655	ENSMZEG00005008545	mrpl42	96	69.655	Maylandia_zebra
ENSORLG00000013500	mrpl42	61	68.571	ENSMMOG00000002317	mrpl42	68	68.571	Mola_mola
ENSORLG00000013500	mrpl42	85	62.179	ENSMALG00000015794	mrpl42	96	62.179	Monopterus_albus
ENSORLG00000013500	mrpl42	85	68.276	ENSNBRG00000003307	mrpl42	100	68.276	Neolamprologus_brichardi
ENSORLG00000013500	mrpl42	85	68.276	ENSONIG00000011753	mrpl42	100	68.276	Oreochromis_niloticus
ENSORLG00000013500	mrpl42	58	57.576	ENSOANG00000019984	-	67	57.576	Ornithorhynchus_anatinus
ENSORLG00000013500	mrpl42	85	95.890	ENSORLG00020000548	mrpl42	100	95.890	Oryzias_latipes_hni
ENSORLG00000013500	mrpl42	85	95.172	ENSORLG00015016984	mrpl42	100	95.172	Oryzias_latipes_hsok
ENSORLG00000013500	mrpl42	85	84.932	ENSOMEG00000010700	mrpl42	100	84.932	Oryzias_melastigma
ENSORLG00000013500	mrpl42	85	59.184	ENSPKIG00000025457	mrpl42	100	59.184	Paramormyrops_kingsleyae
ENSORLG00000013500	mrpl42	72	65.323	ENSPMGG00000019705	mrpl42	88	65.323	Periophthalmus_magnuspinnatus
ENSORLG00000013500	mrpl42	58	53.922	ENSPMAG00000008091	mrpl42	66	53.922	Petromyzon_marinus
ENSORLG00000013500	mrpl42	85	66.438	ENSPFOG00000016539	mrpl42	99	66.438	Poecilia_formosa
ENSORLG00000013500	mrpl42	85	67.123	ENSPLAG00000001255	mrpl42	100	67.123	Poecilia_latipinna
ENSORLG00000013500	mrpl42	85	66.438	ENSPMEG00000016462	mrpl42	100	66.438	Poecilia_mexicana
ENSORLG00000013500	mrpl42	69	72.269	ENSPREG00000012053	mrpl42	86	72.269	Poecilia_reticulata
ENSORLG00000013500	mrpl42	85	69.655	ENSPNYG00000009586	mrpl42	100	69.655	Pundamilia_nyererei
ENSORLG00000013500	mrpl42	79	50.355	ENSPNAG00000020753	mrpl42	97	50.355	Pygocentrus_nattereri
ENSORLG00000013500	mrpl42	85	68.493	ENSSMAG00000000262	mrpl42	100	68.493	Scophthalmus_maximus
ENSORLG00000013500	mrpl42	85	69.863	ENSSDUG00000005949	mrpl42	100	69.863	Seriola_dumerili
ENSORLG00000013500	mrpl42	85	69.178	ENSSLDG00000010159	mrpl42	100	69.178	Seriola_lalandi_dorsalis
ENSORLG00000013500	mrpl42	85	64.384	ENSTRUG00000025949	mrpl42	99	64.384	Takifugu_rubripes
ENSORLG00000013500	mrpl42	58	62.245	ENSXETG00000032902	mrpl42	80	62.245	Xenopus_tropicalis
ENSORLG00000013500	mrpl42	85	63.699	ENSXCOG00000013875	mrpl42	98	63.699	Xiphophorus_couchianus