EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000013525 (Gene tree)
Gene ID: 101155509
Gene Symbol: lsm14b
Alias: -
Full Name: protein LSM14 homolog B-B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 6030 bases
Position: chr5:25465438-25471467
Accession: 101155509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000016957	FDF	PF09532.10	1.4e-06	1	1
ENSORLP00000016957	SM-ATX	PF14438.6	2e-08	1	1
ENSORLP00000016957	LSM14	PF12701.7	6.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000016958	-	4794	XM_023955146	ENSORLP00000016957	365 (aa)	XP_023810914	H2MEF1

Gene Model

Click here to download ENSORLG00000013525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000013525	lsm14b	92	45.042	ENSORLG00000028353	LSM14B	90	44.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013525	lsm14b	92	52.717	ENSG00000149657	LSM14B	100	46.965	Homo_sapiens
ENSORLG00000013525	lsm14b	100	83.198	ENSAPOG00000001780	lsm14b	100	81.572	Acanthochromis_polyacanthus
ENSORLG00000013525	lsm14b	91	46.552	ENSAMEG00000013430	LSM14B	91	44.186	Ailuropoda_melanoleuca
ENSORLG00000013525	lsm14b	61	39.669	ENSACIG00000003147	LSM14B	87	38.397	Amphilophus_citrinellus
ENSORLG00000013525	lsm14b	99	72.652	ENSACIG00000012266	lsm14b	99	73.204	Amphilophus_citrinellus
ENSORLG00000013525	lsm14b	100	83.469	ENSAOCG00000012380	lsm14b	100	81.843	Amphiprion_ocellaris
ENSORLG00000013525	lsm14b	92	47.486	ENSAOCG00000006667	LSM14B	89	46.398	Amphiprion_ocellaris
ENSORLG00000013525	lsm14b	100	74.863	ENSAPEG00000023633	lsm14b	100	74.863	Amphiprion_percula
ENSORLG00000013525	lsm14b	62	38.909	ENSATEG00000015895	LSM14B	87	39.437	Anabas_testudineus
ENSORLG00000013525	lsm14b	100	74.468	ENSATEG00000016603	lsm14b	100	73.545	Anabas_testudineus
ENSORLG00000013525	lsm14b	82	43.784	ENSAPLG00000013203	LSM14B	90	42.466	Anas_platyrhynchos
ENSORLG00000013525	lsm14b	99	50.886	ENSACAG00000016195	LSM14B	99	52.417	Anolis_carolinensis
ENSORLG00000013525	lsm14b	92	52.446	ENSANAG00000037915	LSM14B	90	50.138	Aotus_nancymaae
ENSORLG00000013525	lsm14b	100	75.946	ENSACLG00000019663	lsm14b	100	74.054	Astatotilapia_calliptera
ENSORLG00000013525	lsm14b	90	55.801	ENSAMXG00000002865	lsm14b	90	57.703	Astyanax_mexicanus
ENSORLG00000013525	lsm14b	92	47.677	ENSBTAG00000021558	LSM14B	91	45.792	Bos_taurus
ENSORLG00000013525	lsm14b	92	52.174	ENSCJAG00000014434	LSM14B	90	49.864	Callithrix_jacchus
ENSORLG00000013525	lsm14b	81	44.414	ENSCAFG00000012518	LSM14B	89	42.033	Canis_familiaris
ENSORLG00000013525	lsm14b	92	52.174	ENSCAFG00020022150	LSM14B	90	50.411	Canis_lupus_dingo
ENSORLG00000013525	lsm14b	93	42.350	ENSCHIG00000022681	-	90	39.831	Capra_hircus
ENSORLG00000013525	lsm14b	92	51.872	ENSCHIG00000010284	-	90	49.322	Capra_hircus
ENSORLG00000013525	lsm14b	80	49.231	ENSTSYG00000031914	LSM14B	79	47.500	Carlito_syrichta
ENSORLG00000013525	lsm14b	81	50.311	ENSCAPG00000013059	LSM14B	89	47.950	Cavia_aperea
ENSORLG00000013525	lsm14b	80	50.467	ENSCPOG00000038080	LSM14B	89	48.101	Cavia_porcellus
ENSORLG00000013525	lsm14b	92	38.440	ENSCCAG00000024900	-	76	36.364	Cebus_capucinus
ENSORLG00000013525	lsm14b	92	52.174	ENSCCAG00000021267	LSM14B	90	49.862	Cebus_capucinus
ENSORLG00000013525	lsm14b	92	52.717	ENSCATG00000036006	LSM14B	90	50.689	Cercocebus_atys
ENSORLG00000013525	lsm14b	80	49.533	ENSCLAG00000003186	LSM14B	89	47.152	Chinchilla_lanigera
ENSORLG00000013525	lsm14b	92	48.092	ENSCSAG00000015729	LSM14B	91	45.619	Chlorocebus_sabaeus
ENSORLG00000013525	lsm14b	91	47.750	ENSCPBG00000027065	LSM14B	91	46.329	Chrysemys_picta_bellii
ENSORLG00000013525	lsm14b	80	48.308	ENSCANG00000036986	LSM14B	89	45.938	Colobus_angolensis_palliatus
ENSORLG00000013525	lsm14b	92	52.473	ENSCGRG00001018399	Lsm14b	90	52.514	Cricetulus_griseus_chok1gshd
ENSORLG00000013525	lsm14b	60	38.828	ENSCGRG00000006111	-	90	35.448	Cricetulus_griseus_crigri
ENSORLG00000013525	lsm14b	92	47.368	ENSCSEG00000020669	LSM14B	90	43.251	Cynoglossus_semilaevis
ENSORLG00000013525	lsm14b	100	73.404	ENSCSEG00000004722	lsm14b	100	72.340	Cynoglossus_semilaevis
ENSORLG00000013525	lsm14b	62	37.037	ENSCVAG00000012433	-	89	34.959	Cyprinodon_variegatus
ENSORLG00000013525	lsm14b	99	53.368	ENSDARG00000025386	lsm14b	91	52.732	Danio_rerio
ENSORLG00000013525	lsm14b	60	38.676	ENSDNOG00000025246	LSM14B	88	35.816	Dasypus_novemcinctus
ENSORLG00000013525	lsm14b	81	49.074	ENSDORG00000016683	Lsm14b	78	46.708	Dipodomys_ordii
ENSORLG00000013525	lsm14b	56	38.528	ENSETEG00000011188	-	99	37.500	Echinops_telfairi
ENSORLG00000013525	lsm14b	93	44.505	ENSETEG00000001869	-	90	42.693	Echinops_telfairi
ENSORLG00000013525	lsm14b	60	41.004	ENSEASG00005023218	LSM14B	88	38.849	Equus_asinus_asinus
ENSORLG00000013525	lsm14b	92	53.297	ENSECAG00000010659	LSM14B	90	52.925	Equus_caballus
ENSORLG00000013525	lsm14b	55	65.000	ENSEEUG00000007331	LSM14B	65	65.000	Erinaceus_europaeus
ENSORLG00000013525	lsm14b	90	51.014	ENSELUG00000016299	LSM14B	90	50.872	Esox_lucius
ENSORLG00000013525	lsm14b	99	59.948	ENSELUG00000005780	lsm14b	90	60.172	Esox_lucius
ENSORLG00000013525	lsm14b	92	52.044	ENSFCAG00000003248	LSM14B	90	49.448	Felis_catus
ENSORLG00000013525	lsm14b	81	45.304	ENSFALG00000010618	LSM14B	90	42.975	Ficedula_albicollis
ENSORLG00000013525	lsm14b	80	49.533	ENSFDAG00000002214	LSM14B	89	47.152	Fukomys_damarensis
ENSORLG00000013525	lsm14b	100	74.457	ENSFHEG00000006237	lsm14b	100	74.457	Fundulus_heteroclitus
ENSORLG00000013525	lsm14b	75	46.000	ENSFHEG00000003362	LSM14B	74	46.026	Fundulus_heteroclitus
ENSORLG00000013525	lsm14b	100	66.129	ENSGMOG00000017115	lsm14b	99	62.634	Gadus_morhua
ENSORLG00000013525	lsm14b	91	53.005	ENSGALG00000005125	LSM14B	90	50.689	Gallus_gallus
ENSORLG00000013525	lsm14b	100	70.889	ENSGAFG00000020318	lsm14b	100	69.811	Gambusia_affinis
ENSORLG00000013525	lsm14b	68	37.594	ENSGAFG00000013723	LSM14B	85	37.445	Gambusia_affinis
ENSORLG00000013525	lsm14b	99	74.263	ENSGACG00000009973	lsm14b	99	73.995	Gasterosteus_aculeatus
ENSORLG00000013525	lsm14b	54	40.000	ENSGAGG00000004106	LSM14B	78	38.605	Gopherus_agassizii
ENSORLG00000013525	lsm14b	82	48.640	ENSGGOG00000005630	LSM14B	85	46.037	Gorilla_gorilla
ENSORLG00000013525	lsm14b	92	53.571	ENSHGLG00000015055	LSM14B	90	51.532	Heterocephalus_glaber_female
ENSORLG00000013525	lsm14b	80	50.000	ENSHGLG00100015273	LSM14B	89	47.604	Heterocephalus_glaber_male
ENSORLG00000013525	lsm14b	68	54.941	ENSHCOG00000004867	lsm14b	100	52.362	Hippocampus_comes
ENSORLG00000013525	lsm14b	92	47.238	ENSHCOG00000018747	LSM14B	90	46.724	Hippocampus_comes
ENSORLG00000013525	lsm14b	91	56.712	ENSIPUG00000014946	lsm14b	86	53.476	Ictalurus_punctatus
ENSORLG00000013525	lsm14b	80	49.846	ENSSTOG00000020482	LSM14B	89	47.812	Ictidomys_tridecemlineatus
ENSORLG00000013525	lsm14b	91	52.925	ENSJJAG00000012728	Lsm14b	89	52.260	Jaculus_jaculus
ENSORLG00000013525	lsm14b	51	35.407	ENSKMAG00000012834	-	86	36.275	Kryptolebias_marmoratus
ENSORLG00000013525	lsm14b	100	80.217	ENSKMAG00000017524	lsm14b	100	78.320	Kryptolebias_marmoratus
ENSORLG00000013525	lsm14b	62	38.559	ENSLBEG00000007951	LSM14B	85	33.628	Labrus_bergylta
ENSORLG00000013525	lsm14b	91	48.485	ENSLACG00000003849	LSM14B	91	46.667	Latimeria_chalumnae
ENSORLG00000013525	lsm14b	90	56.410	ENSLOCG00000003746	lsm14b	90	57.265	Lepisosteus_oculatus
ENSORLG00000013525	lsm14b	81	48.171	ENSLAFG00000007492	LSM14B	89	46.440	Loxodonta_africana
ENSORLG00000013525	lsm14b	92	52.717	ENSMFAG00000041479	LSM14B	90	50.689	Macaca_fascicularis
ENSORLG00000013525	lsm14b	92	52.717	ENSMMUG00000014084	LSM14B	90	50.689	Macaca_mulatta
ENSORLG00000013525	lsm14b	92	52.717	ENSMNEG00000045573	LSM14B	90	50.689	Macaca_nemestrina
ENSORLG00000013525	lsm14b	80	49.231	ENSMLEG00000040895	LSM14B	89	46.875	Mandrillus_leucophaeus
ENSORLG00000013525	lsm14b	92	50.425	ENSMAMG00000024124	LSM14B	89	47.977	Mastacembelus_armatus
ENSORLG00000013525	lsm14b	100	73.797	ENSMAMG00000020539	lsm14b	100	72.193	Mastacembelus_armatus
ENSORLG00000013525	lsm14b	91	43.733	ENSMZEG00005026001	LSM14B	93	46.307	Maylandia_zebra
ENSORLG00000013525	lsm14b	100	76.216	ENSMZEG00005000987	lsm14b	100	74.324	Maylandia_zebra
ENSORLG00000013525	lsm14b	82	47.892	ENSMGAG00000005300	LSM14B	89	44.073	Meleagris_gallopavo
ENSORLG00000013525	lsm14b	92	52.473	ENSMAUG00000020700	Lsm14b	90	50.139	Mesocricetus_auratus
ENSORLG00000013525	lsm14b	92	52.419	ENSMICG00000014675	LSM14B	90	50.681	Microcebus_murinus
ENSORLG00000013525	lsm14b	92	53.297	ENSMOCG00000020600	Lsm14b	90	52.235	Microtus_ochrogaster
ENSORLG00000013525	lsm14b	89	67.409	ENSMMOG00000020042	lsm14b	93	67.409	Mola_mola
ENSORLG00000013525	lsm14b	90	50.000	ENSMMOG00000017321	LSM14B	89	46.552	Mola_mola
ENSORLG00000013525	lsm14b	60	39.362	ENSMODG00000016690	LSM14B	88	35.000	Monodelphis_domestica
ENSORLG00000013525	lsm14b	91	44.507	ENSMALG00000022251	LSM14B	89	46.957	Monopterus_albus
ENSORLG00000013525	lsm14b	100	71.351	ENSMALG00000004783	lsm14b	97	72.118	Monopterus_albus
ENSORLG00000013525	lsm14b	92	52.473	MGP_CAROLIEiJ_G0024770	Lsm14b	90	50.139	Mus_caroli
ENSORLG00000013525	lsm14b	92	52.473	ENSMUSG00000039108	Lsm14b	90	50.139	Mus_musculus
ENSORLG00000013525	lsm14b	92	52.473	MGP_PahariEiJ_G0026214	Lsm14b	90	50.139	Mus_pahari
ENSORLG00000013525	lsm14b	92	52.473	MGP_SPRETEiJ_G0025693	Lsm14b	90	50.139	Mus_spretus
ENSORLG00000013525	lsm14b	86	43.684	ENSMPUG00000007584	LSM14B	91	40.957	Mustela_putorius_furo
ENSORLG00000013525	lsm14b	91	51.934	ENSMLUG00000000304	LSM14B	90	49.046	Myotis_lucifugus
ENSORLG00000013525	lsm14b	80	49.231	ENSNLEG00000015757	LSM14B	89	46.875	Nomascus_leucogenys
ENSORLG00000013525	lsm14b	66	71.329	ENSMEUG00000008267	-	65	71.329	Notamacropus_eugenii
ENSORLG00000013525	lsm14b	92	53.571	ENSODEG00000004099	LSM14B	90	51.532	Octodon_degus
ENSORLG00000013525	lsm14b	100	77.838	ENSONIG00000020318	lsm14b	100	75.676	Oreochromis_niloticus
ENSORLG00000013525	lsm14b	74	53.405	ENSOANG00000003370	LSM14B	97	49.677	Ornithorhynchus_anatinus
ENSORLG00000013525	lsm14b	81	46.933	ENSOCUG00000006279	LSM14B	89	46.130	Oryctolagus_cuniculus
ENSORLG00000013525	lsm14b	62	33.984	ENSORLG00020018191	-	85	33.198	Oryzias_latipes_hni
ENSORLG00000013525	lsm14b	100	99.726	ENSORLG00020020553	lsm14b	100	99.726	Oryzias_latipes_hni
ENSORLG00000013525	lsm14b	92	44.789	ENSORLG00015013157	LSM14B	90	43.768	Oryzias_latipes_hsok
ENSORLG00000013525	lsm14b	100	99.726	ENSORLG00015016862	lsm14b	100	99.726	Oryzias_latipes_hsok
ENSORLG00000013525	lsm14b	100	97.260	ENSOMEG00000023917	lsm14b	100	97.260	Oryzias_melastigma
ENSORLG00000013525	lsm14b	62	35.776	ENSOMEG00000000171	-	83	33.484	Oryzias_melastigma
ENSORLG00000013525	lsm14b	92	48.346	ENSOGAG00000003915	LSM14B	91	46.392	Otolemur_garnettii
ENSORLG00000013525	lsm14b	81	42.547	ENSOARG00000014706	LSM14B	88	40.984	Ovis_aries
ENSORLG00000013525	lsm14b	82	48.640	ENSPPAG00000035799	LSM14B	85	46.037	Pan_paniscus
ENSORLG00000013525	lsm14b	92	52.316	ENSPPRG00000009197	LSM14B	90	49.724	Panthera_pardus
ENSORLG00000013525	lsm14b	60	41.841	ENSPTIG00000021518	LSM14B	91	34.444	Panthera_tigris_altaica
ENSORLG00000013525	lsm14b	92	52.717	ENSPTRG00000013696	LSM14B	90	50.411	Pan_troglodytes
ENSORLG00000013525	lsm14b	92	52.717	ENSPANG00000011747	LSM14B	90	50.689	Papio_anubis
ENSORLG00000013525	lsm14b	91	59.259	ENSPKIG00000003275	lsm14b	88	80.000	Paramormyrops_kingsleyae
ENSORLG00000013525	lsm14b	81	50.000	ENSPSIG00000014762	LSM14B	89	47.988	Pelodiscus_sinensis
ENSORLG00000013525	lsm14b	91	53.203	ENSPEMG00000017688	Lsm14b	90	50.847	Peromyscus_maniculatus_bairdii
ENSORLG00000013525	lsm14b	92	53.333	ENSPCIG00000013405	LSM14B	90	52.958	Phascolarctos_cinereus
ENSORLG00000013525	lsm14b	100	75.881	ENSPFOG00000005631	lsm14b	100	75.610	Poecilia_formosa
ENSORLG00000013525	lsm14b	100	75.339	ENSPLAG00000002449	lsm14b	100	75.068	Poecilia_latipinna
ENSORLG00000013525	lsm14b	89	46.176	ENSPLAG00000005793	LSM14B	89	44.412	Poecilia_latipinna
ENSORLG00000013525	lsm14b	100	76.152	ENSPMEG00000000745	lsm14b	100	75.068	Poecilia_mexicana
ENSORLG00000013525	lsm14b	88	45.428	ENSPMEG00000022953	LSM14B	89	45.266	Poecilia_mexicana
ENSORLG00000013525	lsm14b	61	34.510	ENSPREG00000007828	LSM14B	85	35.600	Poecilia_reticulata
ENSORLG00000013525	lsm14b	92	48.649	ENSPPYG00000011194	LSM14B	90	46.196	Pongo_abelii
ENSORLG00000013525	lsm14b	92	52.717	ENSPCOG00000013625	LSM14B	90	50.964	Propithecus_coquereli
ENSORLG00000013525	lsm14b	72	41.438	ENSPVAG00000017918	LSM14B	90	42.612	Pteropus_vampyrus
ENSORLG00000013525	lsm14b	90	56.389	ENSPNAG00000012777	lsm14b	90	58.120	Pygocentrus_nattereri
ENSORLG00000013525	lsm14b	92	48.346	ENSRNOG00000054557	Lsm14b	91	46.134	Rattus_norvegicus
ENSORLG00000013525	lsm14b	81	48.447	ENSRBIG00000033461	LSM14B	88	46.057	Rhinopithecus_bieti
ENSORLG00000013525	lsm14b	82	49.398	ENSRROG00000042949	LSM14B	81	47.095	Rhinopithecus_roxellana
ENSORLG00000013525	lsm14b	80	49.231	ENSSBOG00000032820	LSM14B	89	46.875	Saimiri_boliviensis_boliviensis
ENSORLG00000013525	lsm14b	81	49.688	ENSSHAG00000015528	LSM14B	87	48.903	Sarcophilus_harrisii
ENSORLG00000013525	lsm14b	90	56.772	ENSSFOG00015004627	lsm14b	91	54.596	Scleropages_formosus
ENSORLG00000013525	lsm14b	100	79.255	ENSSMAG00000012725	lsm14b	100	78.723	Scophthalmus_maximus
ENSORLG00000013525	lsm14b	92	48.098	ENSSMAG00000000135	LSM14B	89	47.472	Scophthalmus_maximus
ENSORLG00000013525	lsm14b	91	49.859	ENSSDUG00000022770	LSM14B	89	50.000	Seriola_dumerili
ENSORLG00000013525	lsm14b	100	78.610	ENSSDUG00000020977	lsm14b	100	78.342	Seriola_dumerili
ENSORLG00000013525	lsm14b	61	41.569	ENSSLDG00000011354	-	87	42.972	Seriola_lalandi_dorsalis
ENSORLG00000013525	lsm14b	50	41.827	ENSSARG00000007749	-	96	38.942	Sorex_araneus
ENSORLG00000013525	lsm14b	91	48.507	ENSSPUG00000014360	LSM14B	96	50.142	Sphenodon_punctatus
ENSORLG00000013525	lsm14b	100	78.474	ENSSPAG00000020915	lsm14b	100	77.384	Stegastes_partitus
ENSORLG00000013525	lsm14b	62	36.965	ENSSPAG00000018854	-	86	32.389	Stegastes_partitus
ENSORLG00000013525	lsm14b	92	52.893	ENSSSCG00000026052	LSM14B	74	50.425	Sus_scrofa
ENSORLG00000013525	lsm14b	81	50.617	ENSTGUG00000007884	LSM14B	89	50.157	Taeniopygia_guttata
ENSORLG00000013525	lsm14b	100	70.652	ENSTRUG00000011354	lsm14b	100	71.196	Takifugu_rubripes
ENSORLG00000013525	lsm14b	91	50.992	ENSTRUG00000001529	LSM14B	90	51.156	Takifugu_rubripes
ENSORLG00000013525	lsm14b	100	65.816	ENSTNIG00000002445	lsm14b	100	65.561	Tetraodon_nigroviridis
ENSORLG00000013525	lsm14b	75	78.571	ENSTTRG00000011043	LSM14B	65	49.057	Tursiops_truncatus
ENSORLG00000013525	lsm14b	89	46.518	ENSUAMG00000025298	LSM14B	89	44.382	Ursus_americanus
ENSORLG00000013525	lsm14b	89	46.518	ENSUMAG00000000480	LSM14B	89	44.382	Ursus_maritimus
ENSORLG00000013525	lsm14b	81	48.780	ENSVVUG00000015920	LSM14B	88	46.154	Vulpes_vulpes
ENSORLG00000013525	lsm14b	85	52.786	ENSXETG00000001997	lsm14b	99	51.026	Xenopus_tropicalis
ENSORLG00000013525	lsm14b	100	75.000	ENSXMAG00000010013	lsm14b	100	73.913	Xiphophorus_maculatus