EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000013588 (Gene tree)
Gene ID: 101158733
Gene Symbol: nup35
Alias: -
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11638 bases
Position: chr21:12115799-12127436
Accession: 101158733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017042	Nup35_RRM	PF05172.13	1.1e-24	1	1
ENSORLP00000043860	Nup35_RRM	PF05172.13	1.1e-24	1	1
ENSORLP00000017042	Nup35_RRM_2	PF14605.6	3.6e-10	1	1
ENSORLP00000043860	Nup35_RRM_2	PF14605.6	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040470	-	3981	XM_004081601	ENSORLP00000043860	297 (aa)	XP_004081649	UPI0002A4A304
ENSORLT00000017043	-	3616	-	ENSORLP00000017042	288 (aa)	-	H2MEN1

Gene Model

Click here to download ENSORLG00000013588's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013588	nup35	100	61.905	ENSG00000163002	NUP35	100	66.250	Homo_sapiens
ENSORLG00000013588	nup35	100	88.552	ENSAPOG00000003630	nup35	100	88.552	Acanthochromis_polyacanthus
ENSORLG00000013588	nup35	100	59.937	ENSAMEG00000001191	NUP35	96	59.938	Ailuropoda_melanoleuca
ENSORLG00000013588	nup35	80	90.476	ENSACIG00000023984	nup35	96	90.476	Amphilophus_citrinellus
ENSORLG00000013588	nup35	100	89.236	ENSAOCG00000007484	nup35	100	89.226	Amphiprion_ocellaris
ENSORLG00000013588	nup35	100	89.236	ENSAPEG00000020027	nup35	100	89.226	Amphiprion_percula
ENSORLG00000013588	nup35	100	88.194	ENSATEG00000019305	nup35	100	88.215	Anabas_testudineus
ENSORLG00000013588	nup35	100	61.022	ENSAPLG00000009161	NUP35	97	60.748	Anas_platyrhynchos
ENSORLG00000013588	nup35	100	59.744	ENSACAG00000008692	NUP35	96	60.063	Anolis_carolinensis
ENSORLG00000013588	nup35	100	61.465	ENSANAG00000021090	NUP35	96	61.442	Aotus_nancymaae
ENSORLG00000013588	nup35	100	88.255	ENSACLG00000013918	nup35	100	88.255	Astatotilapia_calliptera
ENSORLG00000013588	nup35	100	63.226	ENSAMXG00000003371	nup35	100	63.226	Astyanax_mexicanus
ENSORLG00000013588	nup35	100	61.270	ENSBTAG00000009777	NUP35	96	61.250	Bos_taurus
ENSORLG00000013588	nup35	100	61.905	ENSCJAG00000011104	NUP35	96	61.875	Callithrix_jacchus
ENSORLG00000013588	nup35	100	60.883	ENSCAFG00000031849	NUP35	100	60.883	Canis_familiaris
ENSORLG00000013588	nup35	100	60.883	ENSCAFG00020008408	NUP35	96	61.059	Canis_lupus_dingo
ENSORLG00000013588	nup35	100	61.270	ENSCHIG00000023148	NUP35	100	61.270	Capra_hircus
ENSORLG00000013588	nup35	100	59.062	ENSTSYG00000002117	NUP35	96	59.077	Carlito_syrichta
ENSORLG00000013588	nup35	100	48.254	ENSCAPG00000005703	NUP35	97	49.371	Cavia_aperea
ENSORLG00000013588	nup35	100	59.873	ENSCPOG00000011906	NUP35	97	60.883	Cavia_porcellus
ENSORLG00000013588	nup35	100	61.905	ENSCCAG00000025009	NUP35	100	62.687	Cebus_capucinus
ENSORLG00000013588	nup35	100	56.250	ENSCATG00000033109	NUP35	96	56.311	Cercocebus_atys
ENSORLG00000013588	nup35	100	60.828	ENSCLAG00000012559	NUP35	96	60.815	Chinchilla_lanigera
ENSORLG00000013588	nup35	100	61.587	ENSCSAG00000012620	NUP35	96	61.562	Chlorocebus_sabaeus
ENSORLG00000013588	nup35	100	61.146	ENSCPBG00000001303	NUP35	98	61.111	Chrysemys_picta_bellii
ENSORLG00000013588	nup35	99	42.812	ENSCING00000009659	-	97	43.168	Ciona_intestinalis
ENSORLG00000013588	nup35	99	39.003	ENSCSAVG00000007467	-	99	39.130	Ciona_savignyi
ENSORLG00000013588	nup35	100	61.587	ENSCANG00000030785	NUP35	100	61.587	Colobus_angolensis_palliatus
ENSORLG00000013588	nup35	100	60.703	ENSCGRG00001018638	-	96	60.883	Cricetulus_griseus_chok1gshd
ENSORLG00000013588	nup35	100	60.703	ENSCGRG00000011313	-	96	60.883	Cricetulus_griseus_crigri
ENSORLG00000013588	nup35	100	79.599	ENSCSEG00000000938	nup35	100	79.599	Cynoglossus_semilaevis
ENSORLG00000013588	nup35	100	84.722	ENSCVAG00000001792	nup35	100	84.512	Cyprinodon_variegatus
ENSORLG00000013588	nup35	100	64.650	ENSDARG00000012222	nup35	100	64.831	Danio_rerio
ENSORLG00000013588	nup35	100	59.873	ENSDNOG00000009513	-	85	59.875	Dasypus_novemcinctus
ENSORLG00000013588	nup35	100	59.554	ENSDNOG00000038754	-	96	59.561	Dasypus_novemcinctus
ENSORLG00000013588	nup35	100	59.873	ENSDORG00000010458	-	97	60.063	Dipodomys_ordii
ENSORLG00000013588	nup35	100	60.510	ENSETEG00000005896	NUP35	100	60.568	Echinops_telfairi
ENSORLG00000013588	nup35	100	53.395	ENSEBUG00000013034	nup35	99	53.659	Eptatretus_burgeri
ENSORLG00000013588	nup35	100	60.635	ENSEASG00005022100	NUP35	96	60.625	Equus_asinus_asinus
ENSORLG00000013588	nup35	100	60.635	ENSECAG00000003968	NUP35	100	60.635	Equus_caballus
ENSORLG00000013588	nup35	100	53.968	ENSEEUG00000008469	NUP35	97	54.037	Erinaceus_europaeus
ENSORLG00000013588	nup35	100	65.409	ENSELUG00000013693	nup35	100	65.409	Esox_lucius
ENSORLG00000013588	nup35	100	59.937	ENSFCAG00000025636	NUP35	100	60.252	Felis_catus
ENSORLG00000013588	nup35	100	59.692	ENSFALG00000013175	NUP35	98	59.692	Ficedula_albicollis
ENSORLG00000013588	nup35	100	61.465	ENSFDAG00000017998	NUP35	96	61.442	Fukomys_damarensis
ENSORLG00000013588	nup35	100	86.532	ENSFHEG00000010229	nup35	100	86.869	Fundulus_heteroclitus
ENSORLG00000013588	nup35	80	66.807	ENSGMOG00000003337	nup35	100	66.807	Gadus_morhua
ENSORLG00000013588	nup35	100	60.703	ENSGALG00000002689	NUP35	97	60.883	Gallus_gallus
ENSORLG00000013588	nup35	100	83.557	ENSGAFG00000022048	nup35	100	84.564	Gambusia_affinis
ENSORLG00000013588	nup35	100	84.175	ENSGACG00000008203	nup35	100	84.175	Gasterosteus_aculeatus
ENSORLG00000013588	nup35	100	61.270	ENSGAGG00000001967	NUP35	100	61.270	Gopherus_agassizii
ENSORLG00000013588	nup35	100	61.905	ENSGGOG00000009919	NUP35	99	62.255	Gorilla_gorilla
ENSORLG00000013588	nup35	100	45.833	ENSHGLG00000000414	-	97	46.203	Heterocephalus_glaber_female
ENSORLG00000013588	nup35	93	50.680	ENSHGLG00000008616	-	90	52.921	Heterocephalus_glaber_female
ENSORLG00000013588	nup35	100	60.510	ENSHGLG00000013230	NUP35	96	60.502	Heterocephalus_glaber_female
ENSORLG00000013588	nup35	100	60.510	ENSHGLG00100012840	NUP35	96	60.502	Heterocephalus_glaber_male
ENSORLG00000013588	nup35	100	45.833	ENSHGLG00100010869	-	97	46.203	Heterocephalus_glaber_male
ENSORLG00000013588	nup35	93	50.680	ENSHGLG00100000091	-	91	52.921	Heterocephalus_glaber_male
ENSORLG00000013588	nup35	100	79.461	ENSHCOG00000003882	nup35	100	79.461	Hippocampus_comes
ENSORLG00000013588	nup35	100	64.474	ENSIPUG00000002798	nup35	100	63.376	Ictalurus_punctatus
ENSORLG00000013588	nup35	100	61.022	ENSSTOG00000000711	NUP35	96	61.006	Ictidomys_tridecemlineatus
ENSORLG00000013588	nup35	100	57.929	ENSJJAG00000007003	-	97	57.929	Jaculus_jaculus
ENSORLG00000013588	nup35	99	54.341	ENSJJAG00000017434	-	96	54.430	Jaculus_jaculus
ENSORLG00000013588	nup35	100	60.191	ENSJJAG00000016432	-	97	60.377	Jaculus_jaculus
ENSORLG00000013588	nup35	87	55.596	ENSJJAG00000006387	-	91	55.596	Jaculus_jaculus
ENSORLG00000013588	nup35	100	85.172	ENSKMAG00000011162	nup35	100	86.288	Kryptolebias_marmoratus
ENSORLG00000013588	nup35	100	64.828	ENSLBEG00000012416	nup35	99	64.865	Labrus_bergylta
ENSORLG00000013588	nup35	100	62.382	ENSLACG00000008247	NUP35	100	62.382	Latimeria_chalumnae
ENSORLG00000013588	nup35	100	64.375	ENSLOCG00000006726	nup35	100	64.375	Lepisosteus_oculatus
ENSORLG00000013588	nup35	100	59.621	ENSLAFG00000008155	NUP35	96	59.627	Loxodonta_africana
ENSORLG00000013588	nup35	100	61.270	ENSMFAG00000000834	NUP35	100	61.270	Macaca_fascicularis
ENSORLG00000013588	nup35	100	61.587	ENSMMUG00000004140	NUP35	99	61.635	Macaca_mulatta
ENSORLG00000013588	nup35	100	61.587	ENSMNEG00000029014	NUP35	96	61.562	Macaca_nemestrina
ENSORLG00000013588	nup35	100	61.587	ENSMLEG00000035422	NUP35	100	61.587	Mandrillus_leucophaeus
ENSORLG00000013588	nup35	100	84.175	ENSMAMG00000013232	nup35	100	85.185	Mastacembelus_armatus
ENSORLG00000013588	nup35	100	85.616	ENSMZEG00005020619	nup35	98	87.591	Maylandia_zebra
ENSORLG00000013588	nup35	100	59.105	ENSMGAG00000004412	NUP35	95	59.105	Meleagris_gallopavo
ENSORLG00000013588	nup35	100	60.635	ENSMAUG00000013776	-	96	60.625	Mesocricetus_auratus
ENSORLG00000013588	nup35	100	60.000	ENSMICG00000006790	NUP35	100	60.952	Microcebus_murinus
ENSORLG00000013588	nup35	100	60.952	ENSMOCG00000014754	-	96	60.938	Microtus_ochrogaster
ENSORLG00000013588	nup35	100	80.135	ENSMMOG00000005026	nup35	100	80.135	Mola_mola
ENSORLG00000013588	nup35	100	62.821	ENSMODG00000010578	NUP35	96	62.975	Monodelphis_domestica
ENSORLG00000013588	nup35	100	84.512	ENSMALG00000020187	nup35	100	84.512	Monopterus_albus
ENSORLG00000013588	nup35	100	59.236	MGP_CAROLIEiJ_G0023709	-	96	59.248	Mus_caroli
ENSORLG00000013588	nup35	100	58.974	ENSMUSG00000026999	Nup35	96	58.991	Mus_musculus
ENSORLG00000013588	nup35	100	59.683	MGP_PahariEiJ_G0025160	-	96	59.688	Mus_pahari
ENSORLG00000013588	nup35	80	51.890	MGP_SPRETEiJ_G0033063	-	97	51.890	Mus_spretus
ENSORLG00000013588	nup35	100	60.883	ENSMPUG00000002063	NUP35	96	61.180	Mustela_putorius_furo
ENSORLG00000013588	nup35	100	61.146	ENSMLUG00000013154	NUP35	96	61.129	Myotis_lucifugus
ENSORLG00000013588	nup35	100	59.236	ENSNGAG00000012107	-	96	59.248	Nannospalax_galili
ENSORLG00000013588	nup35	100	86.458	ENSNBRG00000020466	nup35	98	87.205	Neolamprologus_brichardi
ENSORLG00000013588	nup35	100	61.905	ENSNLEG00000035026	NUP35	100	61.905	Nomascus_leucogenys
ENSORLG00000013588	nup35	66	44.762	ENSMEUG00000003001	-	64	44.762	Notamacropus_eugenii
ENSORLG00000013588	nup35	80	60.700	ENSOPRG00000016609	NUP35	78	60.700	Ochotona_princeps
ENSORLG00000013588	nup35	100	60.952	ENSODEG00000011202	-	97	60.559	Octodon_degus
ENSORLG00000013588	nup35	99	42.997	ENSODEG00000000280	-	95	42.994	Octodon_degus
ENSORLG00000013588	nup35	100	88.966	ENSONIG00000016251	nup35	100	88.963	Oreochromis_niloticus
ENSORLG00000013588	nup35	76	64.407	ENSOANG00000006793	-	97	64.583	Ornithorhynchus_anatinus
ENSORLG00000013588	nup35	100	61.587	ENSOCUG00000014407	NUP35	96	61.562	Oryctolagus_cuniculus
ENSORLG00000013588	nup35	100	100.000	ENSORLG00020008201	nup35	100	100.000	Oryzias_latipes_hni
ENSORLG00000013588	nup35	100	99.327	ENSORLG00015011096	nup35	100	99.327	Oryzias_latipes_hsok
ENSORLG00000013588	nup35	100	96.296	ENSOMEG00000007628	nup35	100	96.296	Oryzias_melastigma
ENSORLG00000013588	nup35	100	58.917	ENSOGAG00000011920	NUP35	96	59.875	Otolemur_garnettii
ENSORLG00000013588	nup35	100	61.587	ENSOARG00000016728	NUP35	96	61.562	Ovis_aries
ENSORLG00000013588	nup35	100	61.905	ENSPPAG00000036316	NUP35	100	61.905	Pan_paniscus
ENSORLG00000013588	nup35	100	60.252	ENSPPRG00000024726	NUP35	100	60.568	Panthera_pardus
ENSORLG00000013588	nup35	100	60.252	ENSPTIG00000017299	NUP35	96	60.559	Panthera_tigris_altaica
ENSORLG00000013588	nup35	100	61.905	ENSPTRG00000012711	NUP35	100	61.905	Pan_troglodytes
ENSORLG00000013588	nup35	100	61.587	ENSPANG00000013686	NUP35	96	61.562	Papio_anubis
ENSORLG00000013588	nup35	100	62.500	ENSPKIG00000022051	nup35	100	62.614	Paramormyrops_kingsleyae
ENSORLG00000013588	nup35	100	61.146	ENSPSIG00000002146	NUP35	100	61.146	Pelodiscus_sinensis
ENSORLG00000013588	nup35	100	70.134	ENSPMGG00000022915	nup35	97	71.000	Periophthalmus_magnuspinnatus
ENSORLG00000013588	nup35	100	60.635	ENSPEMG00000014718	-	96	60.625	Peromyscus_maniculatus_bairdii
ENSORLG00000013588	nup35	100	54.375	ENSPMAG00000006604	nup35	98	54.294	Petromyzon_marinus
ENSORLG00000013588	nup35	100	61.783	ENSPCIG00000015482	NUP35	96	61.950	Phascolarctos_cinereus
ENSORLG00000013588	nup35	100	84.564	ENSPFOG00000010020	nup35	100	85.570	Poecilia_formosa
ENSORLG00000013588	nup35	100	84.228	ENSPLAG00000005867	nup35	100	85.235	Poecilia_latipinna
ENSORLG00000013588	nup35	100	84.722	ENSPMEG00000010552	nup35	100	85.570	Poecilia_mexicana
ENSORLG00000013588	nup35	100	83.165	ENSPREG00000021005	nup35	100	83.502	Poecilia_reticulata
ENSORLG00000013588	nup35	100	61.905	ENSPPYG00000012998	-	77	62.069	Pongo_abelii
ENSORLG00000013588	nup35	100	44.839	ENSPCAG00000000605	NUP35	96	45.048	Procavia_capensis
ENSORLG00000013588	nup35	100	60.317	ENSPCOG00000024097	NUP35	96	61.250	Propithecus_coquereli
ENSORLG00000013588	nup35	100	59.554	ENSPVAG00000015908	NUP35	96	59.561	Pteropus_vampyrus
ENSORLG00000013588	nup35	100	87.500	ENSPNYG00000012486	nup35	96	87.119	Pundamilia_nyererei
ENSORLG00000013588	nup35	100	63.492	ENSPNAG00000005181	nup35	98	63.438	Pygocentrus_nattereri
ENSORLG00000013588	nup35	100	60.000	ENSRNOG00000009290	Nup35	96	60.000	Rattus_norvegicus
ENSORLG00000013588	nup35	100	61.587	ENSRBIG00000039427	NUP35	100	61.587	Rhinopithecus_bieti
ENSORLG00000013588	nup35	100	61.587	ENSRROG00000026525	NUP35	96	61.562	Rhinopithecus_roxellana
ENSORLG00000013588	nup35	100	61.905	ENSSBOG00000018676	NUP35	100	63.184	Saimiri_boliviensis_boliviensis
ENSORLG00000013588	nup35	100	61.465	ENSSHAG00000009746	NUP35	96	61.442	Sarcophilus_harrisii
ENSORLG00000013588	nup35	100	64.577	ENSSFOG00015002390	nup35	100	64.577	Scleropages_formosus
ENSORLG00000013588	nup35	100	82.333	ENSSMAG00000015651	nup35	100	82.333	Scophthalmus_maximus
ENSORLG00000013588	nup35	100	84.848	ENSSDUG00000013118	nup35	100	85.859	Seriola_dumerili
ENSORLG00000013588	nup35	100	84.722	ENSSLDG00000018249	nup35	100	83.557	Seriola_lalandi_dorsalis
ENSORLG00000013588	nup35	100	44.969	ENSSARG00000001535	-	100	45.171	Sorex_araneus
ENSORLG00000013588	nup35	100	60.828	ENSSPUG00000018651	NUP35	97	60.748	Sphenodon_punctatus
ENSORLG00000013588	nup35	100	88.215	ENSSPAG00000018264	nup35	100	88.215	Stegastes_partitus
ENSORLG00000013588	nup35	100	60.191	ENSSSCG00000028949	NUP35	96	60.188	Sus_scrofa
ENSORLG00000013588	nup35	100	58.879	ENSTGUG00000011278	NUP35	98	58.841	Taeniopygia_guttata
ENSORLG00000013588	nup35	93	73.188	ENSTRUG00000014111	nup35	100	73.188	Takifugu_rubripes
ENSORLG00000013588	nup35	100	63.889	ENSTNIG00000011568	nup35	95	64.164	Tetraodon_nigroviridis
ENSORLG00000013588	nup35	100	57.827	ENSTBEG00000003328	NUP35	96	57.862	Tupaia_belangeri
ENSORLG00000013588	nup35	100	54.934	ENSTTRG00000002512	NUP35	96	55.016	Tursiops_truncatus
ENSORLG00000013588	nup35	65	61.500	ENSUAMG00000018696	-	97	61.500	Ursus_americanus
ENSORLG00000013588	nup35	92	58.362	ENSUMAG00000017104	NUP35	96	58.725	Ursus_maritimus
ENSORLG00000013588	nup35	100	61.270	ENSVPAG00000011898	NUP35	96	61.250	Vicugna_pacos
ENSORLG00000013588	nup35	100	60.568	ENSVVUG00000016832	NUP35	100	60.568	Vulpes_vulpes
ENSORLG00000013588	nup35	100	56.369	ENSXETG00000001335	nup35	98	54.434	Xenopus_tropicalis
ENSORLG00000013588	nup35	100	84.564	ENSXMAG00000000409	nup35	100	85.570	Xiphophorus_maculatus