EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000013592 (Gene tree)
Gene ID: 101175032
Gene Symbol: drosha
Alias: -
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 84684 bases
Position: chr20:23864273-23948956
Accession: 101175032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017054	Ribonuclease_3	PF00636.26	1.3e-42	1	2
ENSORLP00000017054	Ribonuclease_3	PF00636.26	1.3e-42	2	2
ENSORLP00000031119	Ribonuclease_3	PF00636.26	1.3e-42	1	2
ENSORLP00000031119	Ribonuclease_3	PF00636.26	1.3e-42	2	2
ENSORLP00000043518	Ribonuclease_3	PF00636.26	1.3e-42	1	2
ENSORLP00000043518	Ribonuclease_3	PF00636.26	1.3e-42	2	2
ENSORLP00000039892	Ribonuclease_3	PF00636.26	1.6e-42	1	2
ENSORLP00000039892	Ribonuclease_3	PF00636.26	1.6e-42	2	2
ENSORLP00000039892	dsrm	PF00035.26	9.9e-15	1	1
ENSORLP00000017054	dsrm	PF00035.26	9.9e-15	1	1
ENSORLP00000031119	dsrm	PF00035.26	9.9e-15	1	1
ENSORLP00000043518	dsrm	PF00035.26	9.9e-15	1	1
ENSORLP00000039892	Ribonucleas_3_3	PF14622.6	1.9e-43	1	2
ENSORLP00000039892	Ribonucleas_3_3	PF14622.6	1.9e-43	2	2
ENSORLP00000017054	Ribonucleas_3_3	PF14622.6	2.1e-43	1	2
ENSORLP00000017054	Ribonucleas_3_3	PF14622.6	2.1e-43	2	2
ENSORLP00000031119	Ribonucleas_3_3	PF14622.6	2.1e-43	1	2
ENSORLP00000031119	Ribonucleas_3_3	PF14622.6	2.1e-43	2	2
ENSORLP00000043518	Ribonucleas_3_3	PF14622.6	2.1e-43	1	2
ENSORLP00000043518	Ribonucleas_3_3	PF14622.6	2.1e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000037867	-	3816	-	ENSORLP00000039892	1271 (aa)	-	-
ENSORLT00000017055	-	4110	-	ENSORLP00000017054	1317 (aa)	-	H2MEP2
ENSORLT00000036448	-	6028	XM_023950263	ENSORLP00000043518	1317 (aa)	XP_023806031	UPI0009DA0D6E
ENSORLT00000030908	-	6749	XM_023950262	ENSORLP00000031119	1317 (aa)	XP_023806030	UPI0009DA0D6E

Gene Model

Click here to download ENSORLG00000013592's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013592	drosha	89	79.382	ENSG00000113360	DROSHA	99	74.537	Homo_sapiens
ENSORLG00000013592	drosha	89	76.886	ENSAMEG00000006000	DROSHA	99	72.399	Ailuropoda_melanoleuca
ENSORLG00000013592	drosha	75	94.227	ENSACIG00000019308	drosha	95	95.346	Amphilophus_citrinellus
ENSORLG00000013592	drosha	100	85.082	ENSATEG00000021939	drosha	100	85.629	Anabas_testudineus
ENSORLG00000013592	drosha	100	74.056	ENSAPLG00000004372	DROSHA	93	79.284	Anas_platyrhynchos
ENSORLG00000013592	drosha	100	72.839	ENSACAG00000007970	DROSHA	99	71.346	Anolis_carolinensis
ENSORLG00000013592	drosha	89	76.628	ENSANAG00000020506	DROSHA	94	86.350	Aotus_nancymaae
ENSORLG00000013592	drosha	100	84.911	ENSACLG00000012227	drosha	100	85.355	Astatotilapia_calliptera
ENSORLG00000013592	drosha	100	78.433	ENSAMXG00000005582	drosha	100	78.092	Astyanax_mexicanus
ENSORLG00000013592	drosha	89	80.068	ENSBTAG00000017551	DROSHA	98	75.406	Bos_taurus
ENSORLG00000013592	drosha	66	35.847	WBGene00009163	drsh-1	76	36.742	Caenorhabditis_elegans
ENSORLG00000013592	drosha	89	79.299	ENSCJAG00000018881	DROSHA	97	74.167	Callithrix_jacchus
ENSORLG00000013592	drosha	89	80.153	ENSCAFG00020017559	DROSHA	96	94.298	Canis_lupus_dingo
ENSORLG00000013592	drosha	89	80.407	ENSCHIG00000022226	DROSHA	91	86.364	Capra_hircus
ENSORLG00000013592	drosha	79	86.873	ENSCPOG00000015051	DROSHA	78	86.439	Cavia_porcellus
ENSORLG00000013592	drosha	89	79.382	ENSCCAG00000027283	DROSHA	94	89.762	Cebus_capucinus
ENSORLG00000013592	drosha	89	79.215	ENSCATG00000016833	DROSHA	94	88.314	Cercocebus_atys
ENSORLG00000013592	drosha	89	79.716	ENSCLAG00000013048	DROSHA	93	85.968	Chinchilla_lanigera
ENSORLG00000013592	drosha	89	79.299	ENSCSAG00000017202	DROSHA	96	74.426	Chlorocebus_sabaeus
ENSORLG00000013592	drosha	57	97.403	ENSCHOG00000011786	DROSHA	64	81.624	Choloepus_hoffmanni
ENSORLG00000013592	drosha	100	74.576	ENSCPBG00000000467	DROSHA	85	82.220	Chrysemys_picta_bellii
ENSORLG00000013592	drosha	63	59.809	ENSCSAVG00000010638	-	99	59.809	Ciona_savignyi
ENSORLG00000013592	drosha	89	79.299	ENSCANG00000035071	DROSHA	95	88.314	Colobus_angolensis_palliatus
ENSORLG00000013592	drosha	89	77.284	ENSCGRG00001008885	Drosha	74	86.660	Cricetulus_griseus_chok1gshd
ENSORLG00000013592	drosha	89	77.284	ENSCGRG00000006944	Drosha	74	86.660	Cricetulus_griseus_crigri
ENSORLG00000013592	drosha	100	83.358	ENSCSEG00000001452	drosha	100	83.358	Cynoglossus_semilaevis
ENSORLG00000013592	drosha	100	86.130	ENSCVAG00000004619	drosha	100	86.950	Cyprinodon_variegatus
ENSORLG00000013592	drosha	87	84.735	ENSDARG00000055563	drosha	89	85.108	Danio_rerio
ENSORLG00000013592	drosha	79	86.390	ENSDNOG00000001537	DROSHA	81	86.244	Dasypus_novemcinctus
ENSORLG00000013592	drosha	89	78.881	ENSDORG00000005624	Drosha	86	80.679	Dipodomys_ordii
ENSORLG00000013592	drosha	88	49.290	FBgn0026722	drosha	72	56.179	Drosophila_melanogaster
ENSORLG00000013592	drosha	84	92.135	ENSETEG00000007814	DROSHA	65	92.135	Echinops_telfairi
ENSORLG00000013592	drosha	52	80.764	ENSEBUG00000005974	-	98	81.737	Eptatretus_burgeri
ENSORLG00000013592	drosha	89	80.237	ENSEASG00005007149	DROSHA	98	75.310	Equus_asinus_asinus
ENSORLG00000013592	drosha	89	80.237	ENSECAG00000013578	DROSHA	97	74.848	Equus_caballus
ENSORLG00000013592	drosha	79	82.915	ENSEEUG00000006351	DROSHA	74	82.634	Erinaceus_europaeus
ENSORLG00000013592	drosha	96	75.666	ENSELUG00000015039	drosha	93	75.944	Esox_lucius
ENSORLG00000013592	drosha	89	80.237	ENSFCAG00000000360	DROSHA	92	86.166	Felis_catus
ENSORLG00000013592	drosha	100	74.296	ENSFALG00000012843	DROSHA	100	74.403	Ficedula_albicollis
ENSORLG00000013592	drosha	89	79.466	ENSFDAG00000018414	DROSHA	92	85.870	Fukomys_damarensis
ENSORLG00000013592	drosha	89	74.750	ENSFHEG00000003840	drosha	96	75.750	Fundulus_heteroclitus
ENSORLG00000013592	drosha	100	75.183	ENSGALG00000012916	DROSHA	100	75.554	Gallus_gallus
ENSORLG00000013592	drosha	98	84.920	ENSGAFG00000016853	drosha	95	86.546	Gambusia_affinis
ENSORLG00000013592	drosha	100	74.724	ENSGAGG00000005621	DROSHA	85	82.480	Gopherus_agassizii
ENSORLG00000013592	drosha	89	79.382	ENSGGOG00000011006	DROSHA	94	88.418	Gorilla_gorilla
ENSORLG00000013592	drosha	96	81.421	ENSHBUG00000015907	drosha	99	80.874	Haplochromis_burtoni
ENSORLG00000013592	drosha	89	79.466	ENSHGLG00000018873	DROSHA	98	74.611	Heterocephalus_glaber_female
ENSORLG00000013592	drosha	89	79.466	ENSHGLG00100015793	DROSHA	98	74.611	Heterocephalus_glaber_male
ENSORLG00000013592	drosha	87	86.994	ENSHCOG00000008454	drosha	97	86.219	Hippocampus_comes
ENSORLG00000013592	drosha	88	80.948	ENSIPUG00000021202	drosha	97	77.623	Ictalurus_punctatus
ENSORLG00000013592	drosha	74	87.602	ENSSTOG00000016323	DROSHA	100	94.455	Ictidomys_tridecemlineatus
ENSORLG00000013592	drosha	89	76.613	ENSJJAG00000019758	Drosha	99	71.408	Jaculus_jaculus
ENSORLG00000013592	drosha	100	83.486	ENSLBEG00000006606	drosha	100	83.194	Labrus_bergylta
ENSORLG00000013592	drosha	99	76.923	ENSLACG00000005937	DROSHA	98	77.085	Latimeria_chalumnae
ENSORLG00000013592	drosha	100	77.569	ENSLOCG00000012852	drosha	99	77.971	Lepisosteus_oculatus
ENSORLG00000013592	drosha	89	76.742	ENSLAFG00000013831	DROSHA	95	77.928	Loxodonta_africana
ENSORLG00000013592	drosha	89	79.983	ENSMFAG00000003055	DROSHA	92	84.585	Macaca_fascicularis
ENSORLG00000013592	drosha	89	79.299	ENSMMUG00000012193	DROSHA	94	89.762	Macaca_mulatta
ENSORLG00000013592	drosha	89	79.898	ENSMNEG00000037529	DROSHA	93	84.486	Macaca_nemestrina
ENSORLG00000013592	drosha	89	74.124	ENSMLEG00000024167	DROSHA	99	69.830	Mandrillus_leucophaeus
ENSORLG00000013592	drosha	100	85.207	ENSMAMG00000012613	drosha	95	93.795	Mastacembelus_armatus
ENSORLG00000013592	drosha	100	84.985	ENSMZEG00005019487	drosha	100	85.429	Maylandia_zebra
ENSORLG00000013592	drosha	97	87.700	ENSMGAG00000005087	DROSHA	100	75.628	Meleagris_gallopavo
ENSORLG00000013592	drosha	89	77.490	ENSMAUG00000002863	Drosha	85	78.481	Mesocricetus_auratus
ENSORLG00000013592	drosha	89	77.409	ENSMICG00000002241	DROSHA	95	84.827	Microcebus_murinus
ENSORLG00000013592	drosha	89	77.346	ENSMOCG00000015044	Drosha	86	78.002	Microtus_ochrogaster
ENSORLG00000013592	drosha	76	90.722	ENSMMOG00000004016	drosha	94	90.693	Mola_mola
ENSORLG00000013592	drosha	99	73.608	ENSMODG00000004807	DROSHA	99	71.920	Monodelphis_domestica
ENSORLG00000013592	drosha	100	85.438	ENSMALG00000010542	drosha	100	85.736	Monopterus_albus
ENSORLG00000013592	drosha	79	86.486	MGP_CAROLIEiJ_G0019687	Drosha	95	89.866	Mus_caroli
ENSORLG00000013592	drosha	79	86.583	ENSMUSG00000022191	Drosha	91	86.166	Mus_musculus
ENSORLG00000013592	drosha	79	86.100	MGP_PahariEiJ_G0016063	Drosha	95	89.659	Mus_pahari
ENSORLG00000013592	drosha	79	87.066	MGP_SPRETEiJ_G0020580	Drosha	95	89.969	Mus_spretus
ENSORLG00000013592	drosha	89	77.110	ENSMPUG00000015237	DROSHA	99	72.026	Mustela_putorius_furo
ENSORLG00000013592	drosha	89	76.433	ENSMLUG00000002581	DROSHA	97	81.074	Myotis_lucifugus
ENSORLG00000013592	drosha	89	71.974	ENSNGAG00000017329	Drosha	72	80.683	Nannospalax_galili
ENSORLG00000013592	drosha	75	75.506	ENSNBRG00000001870	drosha	95	76.653	Neolamprologus_brichardi
ENSORLG00000013592	drosha	89	76.761	ENSNLEG00000013963	DROSHA	94	88.314	Nomascus_leucogenys
ENSORLG00000013592	drosha	69	73.643	ENSMEUG00000002029	DROSHA	68	73.200	Notamacropus_eugenii
ENSORLG00000013592	drosha	85	84.483	ENSOPRG00000010845	DROSHA	83	84.483	Ochotona_princeps
ENSORLG00000013592	drosha	79	86.583	ENSODEG00000001911	DROSHA	92	85.771	Octodon_degus
ENSORLG00000013592	drosha	100	82.781	ENSONIG00000006578	drosha	99	82.133	Oreochromis_niloticus
ENSORLG00000013592	drosha	59	76.135	ENSOANG00000015744	-	100	76.245	Ornithorhynchus_anatinus
ENSORLG00000013592	drosha	89	79.665	ENSOCUG00000000367	DROSHA	97	74.722	Oryctolagus_cuniculus
ENSORLG00000013592	drosha	75	99.378	ENSORLG00020002854	drosha	96	99.378	Oryzias_latipes_hni
ENSORLG00000013592	drosha	79	98.152	ENSORLG00015003156	drosha	95	99.183	Oryzias_latipes_hsok
ENSORLG00000013592	drosha	100	93.478	ENSOMEG00000001062	drosha	100	94.940	Oryzias_melastigma
ENSORLG00000013592	drosha	89	75.405	ENSOGAG00000005424	DROSHA	97	76.155	Otolemur_garnettii
ENSORLG00000013592	drosha	89	80.068	ENSPPAG00000037526	DROSHA	95	87.358	Pan_paniscus
ENSORLG00000013592	drosha	89	79.382	ENSPPRG00000002687	DROSHA	92	86.166	Panthera_pardus
ENSORLG00000013592	drosha	89	79.382	ENSPTIG00000017523	DROSHA	92	86.166	Panthera_tigris_altaica
ENSORLG00000013592	drosha	89	80.068	ENSPTRG00000016762	DROSHA	92	85.968	Pan_troglodytes
ENSORLG00000013592	drosha	89	79.983	ENSPANG00000003027	DROSHA	92	84.585	Papio_anubis
ENSORLG00000013592	drosha	100	80.475	ENSPKIG00000011514	drosha	100	80.299	Paramormyrops_kingsleyae
ENSORLG00000013592	drosha	89	77.409	ENSPEMG00000000607	Drosha	74	86.829	Peromyscus_maniculatus_bairdii
ENSORLG00000013592	drosha	99	74.853	ENSPCIG00000006010	DROSHA	98	74.649	Phascolarctos_cinereus
ENSORLG00000013592	drosha	99	85.950	ENSPREG00000022302	drosha	96	87.569	Poecilia_reticulata
ENSORLG00000013592	drosha	89	76.761	ENSPPYG00000015370	DROSHA	99	72.162	Pongo_abelii
ENSORLG00000013592	drosha	84	88.889	ENSPCAG00000007190	DROSHA	69	88.889	Procavia_capensis
ENSORLG00000013592	drosha	89	76.127	ENSPCOG00000028511	DROSHA	94	85.832	Propithecus_coquereli
ENSORLG00000013592	drosha	89	72.727	ENSPVAG00000013167	DROSHA	99	68.637	Pteropus_vampyrus
ENSORLG00000013592	drosha	100	84.911	ENSPNYG00000000398	drosha	95	94.185	Pundamilia_nyererei
ENSORLG00000013592	drosha	88	88.574	ENSPNAG00000011876	drosha	95	89.340	Pygocentrus_nattereri
ENSORLG00000013592	drosha	79	86.486	ENSRNOG00000013451	Drosha	74	86.439	Rattus_norvegicus
ENSORLG00000013592	drosha	89	78.232	ENSRBIG00000032786	DROSHA	94	85.965	Rhinopithecus_bieti
ENSORLG00000013592	drosha	89	79.983	ENSRROG00000028199	DROSHA	98	74.426	Rhinopithecus_roxellana
ENSORLG00000013592	drosha	89	80.085	ENSSBOG00000024008	DROSHA	94	87.901	Saimiri_boliviensis_boliviensis
ENSORLG00000013592	drosha	99	73.463	ENSSHAG00000015198	DROSHA	93	90.176	Sarcophilus_harrisii
ENSORLG00000013592	drosha	100	76.519	ENSSFOG00015009776	drosha	90	83.865	Scleropages_formosus
ENSORLG00000013592	drosha	100	84.706	ENSSMAG00000008069	drosha	100	85.147	Scophthalmus_maximus
ENSORLG00000013592	drosha	100	85.568	ENSSDUG00000010944	drosha	95	96.070	Seriola_dumerili
ENSORLG00000013592	drosha	100	85.693	ENSSLDG00000025271	drosha	95	95.967	Seriola_lalandi_dorsalis
ENSORLG00000013592	drosha	72	71.220	ENSSARG00000004436	-	68	68.750	Sorex_araneus
ENSORLG00000013592	drosha	100	70.794	ENSSPUG00000006902	DROSHA	84	77.537	Sphenodon_punctatus
ENSORLG00000013592	drosha	86	82.555	ENSSSCG00000016809	DROSHA	85	81.787	Sus_scrofa
ENSORLG00000013592	drosha	100	72.740	ENSTGUG00000001955	DROSHA	85	77.853	Taeniopygia_guttata
ENSORLG00000013592	drosha	93	81.659	ENSTRUG00000017778	drosha	97	83.034	Takifugu_rubripes
ENSORLG00000013592	drosha	100	83.309	ENSTNIG00000008688	drosha	94	94.233	Tetraodon_nigroviridis
ENSORLG00000013592	drosha	71	86.433	ENSTBEG00000000537	DROSHA	76	86.128	Tupaia_belangeri
ENSORLG00000013592	drosha	79	87.078	ENSTTRG00000004210	DROSHA	97	80.991	Tursiops_truncatus
ENSORLG00000013592	drosha	89	79.299	ENSUAMG00000025257	DROSHA	99	74.611	Ursus_americanus
ENSORLG00000013592	drosha	89	79.299	ENSUMAG00000014097	DROSHA	95	94.152	Ursus_maritimus
ENSORLG00000013592	drosha	80	80.744	ENSVPAG00000011260	DROSHA	99	76.106	Vicugna_pacos
ENSORLG00000013592	drosha	89	80.237	ENSVVUG00000022212	DROSHA	99	94.023	Vulpes_vulpes
ENSORLG00000013592	drosha	85	83.284	ENSXETG00000016701	drosha	85	75.784	Xenopus_tropicalis