EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000013691 (Gene tree)
Gene ID: 101157338
Gene Symbol: parp1
Alias: -
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11217 bases
Position: chr24:7705345-7716561
Accession: 101157338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017176	PARP	PF00644.20	2.9e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000017177	-	4668	XM_004083480	ENSORLP00000017176	1015 (aa)	XP_004083528	H2MF09

Gene Model

Click here to download ENSORLG00000013691's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03410	Base excision repair	KEGG
ola04210	Apoptosis	KEGG
ola04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000013691	parp1	50	43.462	ENSORLG00000003023	parp2	92	43.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013691	parp1	100	69.765	ENSG00000143799	PARP1	100	69.765	Homo_sapiens
ENSORLG00000013691	parp1	100	88.966	ENSAPOG00000006414	parp1	100	88.966	Acanthochromis_polyacanthus
ENSORLG00000013691	parp1	99	69.028	ENSAMEG00000014451	PARP1	100	69.433	Ailuropoda_melanoleuca
ENSORLG00000013691	parp1	100	88.867	ENSACIG00000005651	parp1	100	88.867	Amphilophus_citrinellus
ENSORLG00000013691	parp1	100	90.345	ENSAOCG00000021005	parp1	100	90.345	Amphiprion_ocellaris
ENSORLG00000013691	parp1	100	90.345	ENSAPEG00000004784	parp1	100	90.345	Amphiprion_percula
ENSORLG00000013691	parp1	100	89.852	ENSATEG00000010457	parp1	100	89.852	Anabas_testudineus
ENSORLG00000013691	parp1	87	72.933	ENSAPLG00000014039	PARP1	99	72.820	Anas_platyrhynchos
ENSORLG00000013691	parp1	100	71.737	ENSACAG00000006189	PARP1	100	72.228	Anolis_carolinensis
ENSORLG00000013691	parp1	100	69.883	ENSANAG00000032699	PARP1	100	70.352	Aotus_nancymaae
ENSORLG00000013691	parp1	100	88.571	ENSACLG00000015489	parp1	100	88.571	Astatotilapia_calliptera
ENSORLG00000013691	parp1	100	79.843	ENSAMXG00000006465	parp1	100	80.137	Astyanax_mexicanus
ENSORLG00000013691	parp1	100	67.742	ENSBTAG00000000837	PARP1	100	67.840	Bos_taurus
ENSORLG00000013691	parp1	92	44.821	WBGene00004049	parp-1	100	47.126	Caenorhabditis_elegans
ENSORLG00000013691	parp1	100	69.201	ENSCJAG00000012831	PARP1	100	69.667	Callithrix_jacchus
ENSORLG00000013691	parp1	99	68.437	ENSCAFG00000016089	PARP1	100	69.050	Canis_familiaris
ENSORLG00000013691	parp1	100	69.374	ENSCAFG00020001660	PARP1	100	69.472	Canis_lupus_dingo
ENSORLG00000013691	parp1	100	68.102	ENSCHIG00000018072	PARP1	100	67.742	Capra_hircus
ENSORLG00000013691	parp1	99	70.748	ENSTSYG00000003699	PARP1	100	70.748	Carlito_syrichta
ENSORLG00000013691	parp1	99	58.579	ENSCAPG00000011113	-	99	58.061	Cavia_aperea
ENSORLG00000013691	parp1	100	69.697	ENSCPOG00000015643	-	100	69.697	Cavia_porcellus
ENSORLG00000013691	parp1	100	70.254	ENSCCAG00000033484	PARP1	100	70.254	Cebus_capucinus
ENSORLG00000013691	parp1	100	69.366	ENSCATG00000038981	PARP1	100	69.366	Cercocebus_atys
ENSORLG00000013691	parp1	99	69.518	ENSCLAG00000006637	PARP1	99	69.518	Chinchilla_lanigera
ENSORLG00000013691	parp1	66	79.688	ENSCHOG00000003539	PARP1	66	79.688	Choloepus_hoffmanni
ENSORLG00000013691	parp1	99	73.149	ENSCPBG00000011958	PARP1	99	73.149	Chrysemys_picta_bellii
ENSORLG00000013691	parp1	99	69.004	ENSCANG00000041340	PARP1	100	69.004	Colobus_angolensis_palliatus
ENSORLG00000013691	parp1	100	69.246	ENSCGRG00001020559	Parp1	100	69.455	Cricetulus_griseus_chok1gshd
ENSORLG00000013691	parp1	99	69.286	ENSCGRG00000004864	Parp1	100	69.504	Cricetulus_griseus_crigri
ENSORLG00000013691	parp1	100	91.767	ENSCSEG00000020665	parp1	100	91.767	Cynoglossus_semilaevis
ENSORLG00000013691	parp1	99	88.446	ENSCVAG00000021372	parp1	99	88.446	Cyprinodon_variegatus
ENSORLG00000013691	parp1	100	81.158	ENSDARG00000019529	parp1	100	81.525	Danio_rerio
ENSORLG00000013691	parp1	99	68.712	ENSDNOG00000012059	PARP1	100	69.223	Dasypus_novemcinctus
ENSORLG00000013691	parp1	99	67.857	ENSDORG00000005234	Parp1	100	68.469	Dipodomys_ordii
ENSORLG00000013691	parp1	99	40.927	FBgn0010247	Parp	99	40.909	Drosophila_melanogaster
ENSORLG00000013691	parp1	87	79.688	ENSETEG00000013254	PARP1	88	79.688	Echinops_telfairi
ENSORLG00000013691	parp1	99	60.240	ENSEBUG00000005820	parp1	100	60.020	Eptatretus_burgeri
ENSORLG00000013691	parp1	98	69.223	ENSEASG00005013275	PARP1	99	69.821	Equus_asinus_asinus
ENSORLG00000013691	parp1	100	69.374	ENSECAG00000019207	PARP1	100	69.863	Equus_caballus
ENSORLG00000013691	parp1	99	66.667	ENSEEUG00000012253	PARP1	99	67.060	Erinaceus_europaeus
ENSORLG00000013691	parp1	99	82.881	ENSELUG00000017336	parp1	99	83.090	Esox_lucius
ENSORLG00000013691	parp1	97	68.693	ENSFCAG00000005777	PARP1	100	68.896	Felis_catus
ENSORLG00000013691	parp1	99	72.904	ENSFALG00000011578	PARP1	100	72.904	Ficedula_albicollis
ENSORLG00000013691	parp1	99	68.571	ENSFDAG00000017662	PARP1	100	68.571	Fukomys_damarensis
ENSORLG00000013691	parp1	100	87.882	ENSFHEG00000001117	parp1	100	87.882	Fundulus_heteroclitus
ENSORLG00000013691	parp1	99	82.417	ENSGMOG00000014929	parp1	100	82.417	Gadus_morhua
ENSORLG00000013691	parp1	100	73.209	ENSGALG00000009228	PARP1	100	73.209	Gallus_gallus
ENSORLG00000013691	parp1	100	88.374	ENSGAFG00000010450	parp1	100	88.374	Gambusia_affinis
ENSORLG00000013691	parp1	100	88.102	ENSGACG00000011280	parp1	100	88.102	Gasterosteus_aculeatus
ENSORLG00000013691	parp1	99	72.458	ENSGAGG00000010066	PARP1	99	72.709	Gopherus_agassizii
ENSORLG00000013691	parp1	100	69.472	ENSGGOG00000006308	PARP1	100	69.472	Gorilla_gorilla
ENSORLG00000013691	parp1	100	89.557	ENSHBUG00000010490	parp1	100	89.557	Haplochromis_burtoni
ENSORLG00000013691	parp1	96	68.629	ENSHGLG00000003992	PARP1	93	68.629	Heterocephalus_glaber_female
ENSORLG00000013691	parp1	96	68.629	ENSHGLG00100016965	PARP1	93	68.629	Heterocephalus_glaber_male
ENSORLG00000013691	parp1	100	84.902	ENSHCOG00000011619	parp1	100	85.588	Hippocampus_comes
ENSORLG00000013691	parp1	100	80.195	ENSIPUG00000020250	parp1	100	80.176	Ictalurus_punctatus
ENSORLG00000013691	parp1	100	69.765	ENSSTOG00000016000	PARP1	100	69.765	Ictidomys_tridecemlineatus
ENSORLG00000013691	parp1	100	68.560	ENSJJAG00000023497	Parp1	100	69.148	Jaculus_jaculus
ENSORLG00000013691	parp1	100	88.473	ENSKMAG00000011627	parp1	100	88.473	Kryptolebias_marmoratus
ENSORLG00000013691	parp1	100	88.966	ENSLBEG00000013376	parp1	100	88.966	Labrus_bergylta
ENSORLG00000013691	parp1	99	56.667	ENSLACG00000002735	PARP1	99	56.680	Latimeria_chalumnae
ENSORLG00000013691	parp1	100	79.351	ENSLOCG00000015798	parp1	100	79.432	Lepisosteus_oculatus
ENSORLG00000013691	parp1	99	68.298	ENSLAFG00000007830	PARP1	100	68.603	Loxodonta_africana
ENSORLG00000013691	parp1	100	69.366	ENSMFAG00000002526	PARP1	100	69.366	Macaca_fascicularis
ENSORLG00000013691	parp1	100	69.463	ENSMMUG00000021820	PARP1	100	69.463	Macaca_mulatta
ENSORLG00000013691	parp1	100	69.366	ENSMNEG00000034074	PARP1	100	69.366	Macaca_nemestrina
ENSORLG00000013691	parp1	100	67.607	ENSMLEG00000012344	PARP1	100	67.607	Mandrillus_leucophaeus
ENSORLG00000013691	parp1	100	88.867	ENSMAMG00000020652	parp1	100	88.867	Mastacembelus_armatus
ENSORLG00000013691	parp1	100	89.557	ENSMZEG00005016907	parp1	100	89.557	Maylandia_zebra
ENSORLG00000013691	parp1	99	73.183	ENSMGAG00000007760	PARP1	100	73.183	Meleagris_gallopavo
ENSORLG00000013691	parp1	100	69.148	ENSMAUG00000008306	Parp1	100	69.066	Mesocricetus_auratus
ENSORLG00000013691	parp1	100	66.634	ENSMICG00000017076	PARP1	100	66.634	Microcebus_murinus
ENSORLG00000013691	parp1	100	69.050	ENSMOCG00000014315	Parp1	100	69.442	Microtus_ochrogaster
ENSORLG00000013691	parp1	100	88.235	ENSMMOG00000015966	parp1	100	88.235	Mola_mola
ENSORLG00000013691	parp1	100	70.674	ENSMODG00000006076	PARP1	100	70.772	Monodelphis_domestica
ENSORLG00000013691	parp1	100	85.714	ENSMALG00000004057	parp1	100	85.714	Monopterus_albus
ENSORLG00000013691	parp1	100	69.193	MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	Mus_caroli
ENSORLG00000013691	parp1	100	69.103	ENSMUSG00000026496	Parp1	99	78.571	Mus_musculus
ENSORLG00000013691	parp1	100	69.103	MGP_SPRETEiJ_G0015777	Parp1	100	78.571	Mus_spretus
ENSORLG00000013691	parp1	100	69.374	ENSMPUG00000004585	PARP1	100	69.765	Mustela_putorius_furo
ENSORLG00000013691	parp1	73	75.581	ENSMLUG00000012285	PARP1	82	75.581	Myotis_lucifugus
ENSORLG00000013691	parp1	100	68.952	ENSNGAG00000003885	Parp1	100	69.148	Nannospalax_galili
ENSORLG00000013691	parp1	100	88.670	ENSNBRG00000017434	parp1	100	88.670	Neolamprologus_brichardi
ENSORLG00000013691	parp1	97	72.356	ENSNLEG00000013905	PARP1	100	72.356	Nomascus_leucogenys
ENSORLG00000013691	parp1	67	78.806	ENSMEUG00000007720	PARP1	87	78.806	Notamacropus_eugenii
ENSORLG00000013691	parp1	100	70.939	ENSOPRG00000011722	PARP1	100	71.526	Ochotona_princeps
ENSORLG00000013691	parp1	100	69.540	ENSODEG00000007424	PARP1	100	69.540	Octodon_degus
ENSORLG00000013691	parp1	100	88.867	ENSONIG00000013486	parp1	100	88.867	Oreochromis_niloticus
ENSORLG00000013691	parp1	99	72.114	ENSOANG00000001488	PARP1	100	72.653	Ornithorhynchus_anatinus
ENSORLG00000013691	parp1	100	70.186	ENSOCUG00000017820	PARP1	100	70.870	Oryctolagus_cuniculus
ENSORLG00000013691	parp1	99	99.287	ENSORLG00020001074	parp1	99	99.287	Oryzias_latipes_hni
ENSORLG00000013691	parp1	100	99.606	ENSORLG00015007090	parp1	100	99.606	Oryzias_latipes_hsok
ENSORLG00000013691	parp1	100	69.569	ENSOGAG00000016206	PARP1	100	69.569	Otolemur_garnettii
ENSORLG00000013691	parp1	100	67.840	ENSOARG00000000811	PARP1	100	67.840	Ovis_aries
ENSORLG00000013691	parp1	100	69.374	ENSPPAG00000040862	PARP1	100	69.374	Pan_paniscus
ENSORLG00000013691	parp1	96	68.400	ENSPPRG00000003528	PARP1	100	68.807	Panthera_pardus
ENSORLG00000013691	parp1	93	58.132	ENSPTIG00000009102	PARP1	98	58.115	Panthera_tigris_altaica
ENSORLG00000013691	parp1	100	69.374	ENSPTRG00000002049	PARP1	100	69.374	Pan_troglodytes
ENSORLG00000013691	parp1	100	69.493	ENSPANG00000011198	PARP1	100	69.493	Papio_anubis
ENSORLG00000013691	parp1	100	79.646	ENSPKIG00000006039	parp1	100	79.744	Paramormyrops_kingsleyae
ENSORLG00000013691	parp1	99	71.662	ENSPSIG00000016374	PARP1	100	71.996	Pelodiscus_sinensis
ENSORLG00000013691	parp1	100	82.532	ENSPMGG00000008936	parp1	100	82.532	Periophthalmus_magnuspinnatus
ENSORLG00000013691	parp1	100	69.366	ENSPEMG00000020230	Parp1	100	69.366	Peromyscus_maniculatus_bairdii
ENSORLG00000013691	parp1	99	70.727	ENSPCIG00000006436	PARP1	99	71.022	Phascolarctos_cinereus
ENSORLG00000013691	parp1	100	87.094	ENSPFOG00000002342	parp1	100	87.094	Poecilia_formosa
ENSORLG00000013691	parp1	100	88.177	ENSPLAG00000000909	parp1	100	88.177	Poecilia_latipinna
ENSORLG00000013691	parp1	100	88.571	ENSPMEG00000013979	parp1	100	88.571	Poecilia_mexicana
ENSORLG00000013691	parp1	100	88.374	ENSPREG00000001114	parp1	100	88.374	Poecilia_reticulata
ENSORLG00000013691	parp1	99	69.152	ENSPPYG00000000164	PARP1	100	69.152	Pongo_abelii
ENSORLG00000013691	parp1	60	78.086	ENSPCAG00000005558	-	59	78.086	Procavia_capensis
ENSORLG00000013691	parp1	100	69.472	ENSPCOG00000016918	PARP1	100	70.059	Propithecus_coquereli
ENSORLG00000013691	parp1	92	76.887	ENSPVAG00000005543	PARP1	92	76.887	Pteropus_vampyrus
ENSORLG00000013691	parp1	100	88.571	ENSPNYG00000009702	parp1	100	88.571	Pundamilia_nyererei
ENSORLG00000013691	parp1	100	82.307	ENSPNAG00000002787	parp1	100	82.893	Pygocentrus_nattereri
ENSORLG00000013691	parp1	100	69.080	ENSRNOG00000003084	Parp1	100	69.193	Rattus_norvegicus
ENSORLG00000013691	parp1	100	69.366	ENSRBIG00000044893	PARP1	99	71.122	Rhinopithecus_bieti
ENSORLG00000013691	parp1	100	51.816	ENSRROG00000040615	-	97	59.481	Rhinopithecus_roxellana
ENSORLG00000013691	parp1	100	69.366	ENSRROG00000029280	PARP1	99	71.122	Rhinopithecus_roxellana
ENSORLG00000013691	parp1	100	70.157	ENSSBOG00000010144	PARP1	100	70.352	Saimiri_boliviensis_boliviensis
ENSORLG00000013691	parp1	99	70.948	ENSSHAG00000001991	PARP1	100	71.152	Sarcophilus_harrisii
ENSORLG00000013691	parp1	100	80.747	ENSSFOG00015020017	parp1	100	80.747	Scleropages_formosus
ENSORLG00000013691	parp1	100	87.685	ENSSMAG00000013799	parp1	100	87.685	Scophthalmus_maximus
ENSORLG00000013691	parp1	100	89.360	ENSSDUG00000016626	parp1	100	89.360	Seriola_dumerili
ENSORLG00000013691	parp1	100	89.360	ENSSLDG00000006384	parp1	100	89.360	Seriola_lalandi_dorsalis
ENSORLG00000013691	parp1	53	77.083	ENSSARG00000009436	-	59	77.083	Sorex_araneus
ENSORLG00000013691	parp1	100	67.878	ENSSPUG00000007790	PARP1	100	68.369	Sphenodon_punctatus
ENSORLG00000013691	parp1	100	86.995	ENSSPAG00000019074	parp1	100	89.570	Stegastes_partitus
ENSORLG00000013691	parp1	100	68.982	ENSSSCG00000023660	PARP1	100	69.472	Sus_scrofa
ENSORLG00000013691	parp1	97	72.425	ENSTGUG00000004260	-	100	72.425	Taeniopygia_guttata
ENSORLG00000013691	parp1	100	85.616	ENSTRUG00000014490	parp1	100	85.616	Takifugu_rubripes
ENSORLG00000013691	parp1	100	84.946	ENSTNIG00000016384	parp1	100	84.848	Tetraodon_nigroviridis
ENSORLG00000013691	parp1	81	78.138	ENSTBEG00000002364	PARP1	91	78.138	Tupaia_belangeri
ENSORLG00000013691	parp1	100	64.579	ENSTTRG00000000188	PARP1	100	64.775	Tursiops_truncatus
ENSORLG00000013691	parp1	96	69.504	ENSUAMG00000014388	PARP1	100	69.909	Ursus_americanus
ENSORLG00000013691	parp1	96	62.602	ENSUMAG00000014555	PARP1	99	63.041	Ursus_maritimus
ENSORLG00000013691	parp1	83	78.431	ENSVPAG00000011411	PARP1	83	78.431	Vicugna_pacos
ENSORLG00000013691	parp1	96	68.437	ENSVVUG00000001655	PARP1	100	68.871	Vulpes_vulpes
ENSORLG00000013691	parp1	98	69.730	ENSXETG00000022610	parp1	99	69.970	Xenopus_tropicalis
ENSORLG00000013691	parp1	100	88.079	ENSXMAG00000003632	parp1	100	88.079	Xiphophorus_maculatus