EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000013734 (Gene tree)
Gene ID: 101156649
Gene Symbol: cnot1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 22873 bases
Position: chr6:25876431-25899303
Accession: 101156649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017226	Not1	PF04054.15	4.2e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000017227	-	7742	XM_011476366	ENSORLP00000017226	2378 (aa)	XP_011474668	H2MF56
ENSORLT00000017224	-	4644	-	ENSORLP00000017223	1547 (aa)	-	H2MF53

Gene Model

Click here to download ENSORLG00000013734's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013734's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013734	cnot1	100	90.626	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSORLG00000013734	cnot1	100	93.235	ENSAPOG00000005042	cnot1	100	93.235	Acanthochromis_polyacanthus
ENSORLG00000013734	cnot1	100	90.668	ENSAMEG00000017298	CNOT1	100	90.630	Ailuropoda_melanoleuca
ENSORLG00000013734	cnot1	90	94.732	ENSACIG00000016003	cnot1	100	95.105	Amphilophus_citrinellus
ENSORLG00000013734	cnot1	100	95.252	ENSAPEG00000022342	cnot1	100	95.378	Amphiprion_percula
ENSORLG00000013734	cnot1	100	93.070	ENSATEG00000012892	cnot1	100	93.070	Anabas_testudineus
ENSORLG00000013734	cnot1	100	89.703	ENSAPLG00000007162	CNOT1	100	89.912	Anas_platyrhynchos
ENSORLG00000013734	cnot1	91	88.920	ENSACAG00000001602	CNOT1	98	89.007	Anolis_carolinensis
ENSORLG00000013734	cnot1	100	87.599	ENSANAG00000038198	CNOT1	100	87.771	Aotus_nancymaae
ENSORLG00000013734	cnot1	100	93.543	ENSACLG00000014234	cnot1	100	93.627	Astatotilapia_calliptera
ENSORLG00000013734	cnot1	100	93.608	ENSAMXG00000013170	cnot1	100	93.776	Astyanax_mexicanus
ENSORLG00000013734	cnot1	95	96.208	ENSBTAG00000020782	CNOT1	100	96.208	Bos_taurus
ENSORLG00000013734	cnot1	77	41.274	WBGene00002845	let-711	91	55.365	Caenorhabditis_elegans
ENSORLG00000013734	cnot1	100	90.310	ENSCJAG00000011318	CNOT1	100	92.364	Callithrix_jacchus
ENSORLG00000013734	cnot1	100	90.038	ENSCAFG00000008426	CNOT1	100	90.209	Canis_familiaris
ENSORLG00000013734	cnot1	100	89.386	ENSCAFG00020010156	CNOT1	100	93.042	Canis_lupus_dingo
ENSORLG00000013734	cnot1	100	90.478	ENSCHIG00000010452	CNOT1	100	90.440	Capra_hircus
ENSORLG00000013734	cnot1	100	90.436	ENSTSYG00000006888	CNOT1	100	90.398	Carlito_syrichta
ENSORLG00000013734	cnot1	100	86.661	ENSCPOG00000013026	CNOT1	100	86.457	Cavia_porcellus
ENSORLG00000013734	cnot1	100	88.800	ENSCCAG00000026333	CNOT1	100	88.763	Cebus_capucinus
ENSORLG00000013734	cnot1	100	90.394	ENSCATG00000032625	CNOT1	100	90.356	Cercocebus_atys
ENSORLG00000013734	cnot1	100	90.394	ENSCLAG00000006289	CNOT1	100	90.356	Chinchilla_lanigera
ENSORLG00000013734	cnot1	100	90.394	ENSCSAG00000004731	CNOT1	100	90.356	Chlorocebus_sabaeus
ENSORLG00000013734	cnot1	80	97.727	ENSCHOG00000009712	CNOT1	83	97.173	Choloepus_hoffmanni
ENSORLG00000013734	cnot1	93	95.644	ENSCPBG00000026222	CNOT1	98	95.644	Chrysemys_picta_bellii
ENSORLG00000013734	cnot1	100	58.589	ENSCING00000009149	-	100	58.326	Ciona_intestinalis
ENSORLG00000013734	cnot1	89	62.745	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSORLG00000013734	cnot1	100	88.546	ENSCANG00000040534	CNOT1	100	88.510	Colobus_angolensis_palliatus
ENSORLG00000013734	cnot1	100	90.159	ENSCGRG00001016365	Cnot1	100	90.398	Cricetulus_griseus_chok1gshd
ENSORLG00000013734	cnot1	100	90.159	ENSCGRG00000001714	Cnot1	100	90.398	Cricetulus_griseus_crigri
ENSORLG00000013734	cnot1	97	99.018	ENSCVAG00000018930	cnot1	100	99.018	Cyprinodon_variegatus
ENSORLG00000013734	cnot1	100	92.914	ENSDARG00000004174	cnot1	100	92.621	Danio_rerio
ENSORLG00000013734	cnot1	100	88.265	ENSDNOG00000013250	CNOT1	100	88.391	Dasypus_novemcinctus
ENSORLG00000013734	cnot1	99	46.148	FBgn0085436	Not1	99	48.156	Drosophila_melanogaster
ENSORLG00000013734	cnot1	84	94.127	ENSETEG00000012806	CNOT1	84	94.127	Echinops_telfairi
ENSORLG00000013734	cnot1	81	75.744	ENSEBUG00000011534	cnot1	95	75.744	Eptatretus_burgeri
ENSORLG00000013734	cnot1	95	96.208	ENSEASG00005005819	CNOT1	100	96.208	Equus_asinus_asinus
ENSORLG00000013734	cnot1	100	90.604	ENSECAG00000009889	CNOT1	100	90.650	Equus_caballus
ENSORLG00000013734	cnot1	89	88.846	ENSEEUG00000006015	CNOT1	90	89.010	Erinaceus_europaeus
ENSORLG00000013734	cnot1	100	93.502	ENSELUG00000014085	cnot1	100	93.375	Esox_lucius
ENSORLG00000013734	cnot1	100	90.171	ENSFCAG00000025155	CNOT1	100	90.343	Felis_catus
ENSORLG00000013734	cnot1	100	90.189	ENSFALG00000007285	CNOT1	100	90.105	Ficedula_albicollis
ENSORLG00000013734	cnot1	100	90.352	ENSFDAG00000013399	CNOT1	100	90.314	Fukomys_damarensis
ENSORLG00000013734	cnot1	100	95.216	ENSFHEG00000020574	cnot1	100	95.216	Fundulus_heteroclitus
ENSORLG00000013734	cnot1	91	93.932	ENSGMOG00000012864	cnot1	100	93.330	Gadus_morhua
ENSORLG00000013734	cnot1	100	90.021	ENSGALG00000002301	CNOT1	100	89.937	Gallus_gallus
ENSORLG00000013734	cnot1	100	93.905	ENSGAFG00000015005	cnot1	100	93.905	Gambusia_affinis
ENSORLG00000013734	cnot1	91	95.324	ENSGACG00000002606	cnot1	100	98.545	Gasterosteus_aculeatus
ENSORLG00000013734	cnot1	100	90.440	ENSGAGG00000022646	CNOT1	100	91.392	Gopherus_agassizii
ENSORLG00000013734	cnot1	100	90.436	ENSGGOG00000009547	CNOT1	100	90.398	Gorilla_gorilla
ENSORLG00000013734	cnot1	100	93.627	ENSHBUG00000001729	cnot1	100	93.711	Haplochromis_burtoni
ENSORLG00000013734	cnot1	100	90.394	ENSHGLG00000014322	CNOT1	100	90.356	Heterocephalus_glaber_female
ENSORLG00000013734	cnot1	100	94.684	ENSHCOG00000006501	cnot1	100	94.558	Hippocampus_comes
ENSORLG00000013734	cnot1	100	91.740	ENSIPUG00000011915	cnot1	100	91.698	Ictalurus_punctatus
ENSORLG00000013734	cnot1	100	90.268	ENSSTOG00000005490	CNOT1	100	90.231	Ictidomys_tridecemlineatus
ENSORLG00000013734	cnot1	100	89.765	ENSJJAG00000000633	Cnot1	100	89.727	Jaculus_jaculus
ENSORLG00000013734	cnot1	100	95.641	ENSKMAG00000006149	cnot1	100	95.096	Kryptolebias_marmoratus
ENSORLG00000013734	cnot1	95	98.603	ENSLBEG00000004740	cnot1	100	98.603	Labrus_bergylta
ENSORLG00000013734	cnot1	100	90.608	ENSLACG00000010869	CNOT1	100	90.566	Latimeria_chalumnae
ENSORLG00000013734	cnot1	100	93.417	ENSLOCG00000006324	cnot1	100	93.456	Lepisosteus_oculatus
ENSORLG00000013734	cnot1	100	90.277	ENSLAFG00000000098	CNOT1	100	90.448	Loxodonta_africana
ENSORLG00000013734	cnot1	100	90.626	ENSMFAG00000035888	CNOT1	100	90.588	Macaca_fascicularis
ENSORLG00000013734	cnot1	100	90.352	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSORLG00000013734	cnot1	100	87.913	ENSMNEG00000031820	CNOT1	100	90.140	Macaca_nemestrina
ENSORLG00000013734	cnot1	100	89.042	ENSMLEG00000040933	CNOT1	100	89.214	Mandrillus_leucophaeus
ENSORLG00000013734	cnot1	100	93.235	ENSMAMG00000016524	cnot1	100	93.235	Mastacembelus_armatus
ENSORLG00000013734	cnot1	100	90.390	ENSMZEG00005016210	cnot1	100	90.180	Maylandia_zebra
ENSORLG00000013734	cnot1	100	90.294	ENSMGAG00000001908	CNOT1	100	90.210	Meleagris_gallopavo
ENSORLG00000013734	cnot1	100	90.264	ENSMICG00000007071	CNOT1	100	90.306	Microcebus_murinus
ENSORLG00000013734	cnot1	100	90.352	ENSMOCG00000017969	Cnot1	100	90.398	Microtus_ochrogaster
ENSORLG00000013734	cnot1	100	91.849	ENSMMOG00000019134	cnot1	100	91.555	Mola_mola
ENSORLG00000013734	cnot1	100	90.147	ENSMODG00000014199	CNOT1	100	90.356	Monodelphis_domestica
ENSORLG00000013734	cnot1	100	93.655	ENSMALG00000008645	cnot1	100	93.655	Monopterus_albus
ENSORLG00000013734	cnot1	95	95.238	MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	Mus_caroli
ENSORLG00000013734	cnot1	100	90.542	ENSMUSG00000036550	Cnot1	100	90.588	Mus_musculus
ENSORLG00000013734	cnot1	100	90.394	MGP_PahariEiJ_G0023028	Cnot1	100	90.440	Mus_pahari
ENSORLG00000013734	cnot1	100	90.394	MGP_SPRETEiJ_G0032549	Cnot1	100	90.440	Mus_spretus
ENSORLG00000013734	cnot1	100	90.436	ENSMPUG00000004830	CNOT1	100	90.398	Mustela_putorius_furo
ENSORLG00000013734	cnot1	100	89.933	ENSMLUG00000003728	CNOT1	100	89.937	Myotis_lucifugus
ENSORLG00000013734	cnot1	100	90.227	ENSNGAG00000018628	Cnot1	100	90.189	Nannospalax_galili
ENSORLG00000013734	cnot1	94	99.299	ENSNBRG00000019358	cnot1	100	99.299	Neolamprologus_brichardi
ENSORLG00000013734	cnot1	100	90.432	ENSNLEG00000003566	CNOT1	100	90.394	Nomascus_leucogenys
ENSORLG00000013734	cnot1	86	91.275	ENSMEUG00000006145	CNOT1	88	91.275	Notamacropus_eugenii
ENSORLG00000013734	cnot1	86	97.333	ENSOPRG00000005604	CNOT1	86	97.333	Ochotona_princeps
ENSORLG00000013734	cnot1	100	90.310	ENSODEG00000016337	CNOT1	100	90.273	Octodon_degus
ENSORLG00000013734	cnot1	100	95.304	ENSONIG00000007358	cnot1	100	95.220	Oreochromis_niloticus
ENSORLG00000013734	cnot1	91	89.833	ENSOANG00000012109	CNOT1	99	90.394	Ornithorhynchus_anatinus
ENSORLG00000013734	cnot1	100	90.394	ENSOCUG00000006911	CNOT1	100	90.356	Oryctolagus_cuniculus
ENSORLG00000013734	cnot1	100	97.939	ENSORLG00020017012	cnot1	100	97.939	Oryzias_latipes_hni
ENSORLG00000013734	cnot1	100	97.813	ENSORLG00015007091	cnot1	100	97.813	Oryzias_latipes_hsok
ENSORLG00000013734	cnot1	100	96.804	ENSOMEG00000015124	cnot1	100	96.804	Oryzias_melastigma
ENSORLG00000013734	cnot1	100	90.356	ENSOGAG00000000543	CNOT1	100	90.273	Otolemur_garnettii
ENSORLG00000013734	cnot1	100	90.478	ENSOARG00000001567	CNOT1	100	90.440	Ovis_aries
ENSORLG00000013734	cnot1	100	90.394	ENSPPAG00000022013	CNOT1	100	90.356	Pan_paniscus
ENSORLG00000013734	cnot1	100	90.436	ENSPPRG00000004867	CNOT1	100	90.398	Panthera_pardus
ENSORLG00000013734	cnot1	100	90.436	ENSPTIG00000012589	CNOT1	100	90.398	Panthera_tigris_altaica
ENSORLG00000013734	cnot1	100	90.130	ENSPTRG00000008183	CNOT1	100	90.301	Pan_troglodytes
ENSORLG00000013734	cnot1	100	87.385	ENSPANG00000020901	CNOT1	100	87.349	Papio_anubis
ENSORLG00000013734	cnot1	100	93.328	ENSPKIG00000023538	CNOT1	100	93.076	Paramormyrops_kingsleyae
ENSORLG00000013734	cnot1	97	94.663	ENSPKIG00000002914	CNOT1	99	86.886	Paramormyrops_kingsleyae
ENSORLG00000013734	cnot1	100	90.147	ENSPSIG00000005499	CNOT1	100	90.063	Pelodiscus_sinensis
ENSORLG00000013734	cnot1	100	79.580	ENSPMAG00000009381	cnot1	100	79.681	Petromyzon_marinus
ENSORLG00000013734	cnot1	95	96.407	ENSPCIG00000007343	CNOT1	100	96.407	Phascolarctos_cinereus
ENSORLG00000013734	cnot1	99	94.833	ENSPFOG00000003497	cnot1	100	95.002	Poecilia_formosa
ENSORLG00000013734	cnot1	95	98.004	ENSPLAG00000014018	cnot1	100	98.004	Poecilia_latipinna
ENSORLG00000013734	cnot1	95	98.004	ENSPMEG00000005868	cnot1	100	98.004	Poecilia_mexicana
ENSORLG00000013734	cnot1	95	98.004	ENSPREG00000018793	cnot1	100	98.004	Poecilia_reticulata
ENSORLG00000013734	cnot1	100	90.352	ENSPPYG00000007410	CNOT1	100	90.314	Pongo_abelii
ENSORLG00000013734	cnot1	87	88.830	ENSPCAG00000003241	CNOT1	88	88.830	Procavia_capensis
ENSORLG00000013734	cnot1	100	90.042	ENSPCOG00000027139	CNOT1	100	90.293	Propithecus_coquereli
ENSORLG00000013734	cnot1	100	87.626	ENSPVAG00000004243	CNOT1	100	88.050	Pteropus_vampyrus
ENSORLG00000013734	cnot1	100	92.220	ENSPNYG00000012919	cnot1	100	92.010	Pundamilia_nyererei
ENSORLG00000013734	cnot1	100	92.473	ENSPNAG00000000246	cnot1	100	92.473	Pygocentrus_nattereri
ENSORLG00000013734	cnot1	100	90.352	ENSRNOG00000012271	Cnot1	100	90.398	Rattus_norvegicus
ENSORLG00000013734	cnot1	100	88.248	ENSRBIG00000044598	CNOT1	100	88.211	Rhinopithecus_bieti
ENSORLG00000013734	cnot1	100	90.394	ENSRROG00000000906	CNOT1	100	90.356	Rhinopithecus_roxellana
ENSORLG00000013734	cnot1	100	86.191	ENSSBOG00000029155	CNOT1	100	86.155	Saimiri_boliviensis_boliviensis
ENSORLG00000013734	cnot1	100	90.185	ENSSHAG00000012187	CNOT1	100	90.185	Sarcophilus_harrisii
ENSORLG00000013734	cnot1	100	92.153	ENSSFOG00015017614	cnot1	100	91.901	Scleropages_formosus
ENSORLG00000013734	cnot1	100	95.600	ENSSMAG00000013844	cnot1	100	95.600	Scophthalmus_maximus
ENSORLG00000013734	cnot1	100	92.986	ENSSDUG00000021491	cnot1	100	92.776	Seriola_dumerili
ENSORLG00000013734	cnot1	100	96.445	ENSSLDG00000014816	cnot1	100	96.445	Seriola_lalandi_dorsalis
ENSORLG00000013734	cnot1	84	97.400	ENSSARG00000000762	CNOT1	88	97.400	Sorex_araneus
ENSORLG00000013734	cnot1	100	94.666	ENSSPAG00000018802	cnot1	100	94.624	Stegastes_partitus
ENSORLG00000013734	cnot1	95	96.208	ENSSSCG00000002799	CNOT1	100	96.208	Sus_scrofa
ENSORLG00000013734	cnot1	100	90.075	ENSTGUG00000005919	CNOT1	100	89.992	Taeniopygia_guttata
ENSORLG00000013734	cnot1	100	93.486	ENSTNIG00000018706	cnot1	100	93.361	Tetraodon_nigroviridis
ENSORLG00000013734	cnot1	80	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSORLG00000013734	cnot1	95	89.559	ENSTTRG00000008460	CNOT1	95	89.507	Tursiops_truncatus
ENSORLG00000013734	cnot1	100	90.436	ENSUAMG00000009251	CNOT1	100	90.398	Ursus_americanus
ENSORLG00000013734	cnot1	100	90.436	ENSUMAG00000021291	CNOT1	100	90.398	Ursus_maritimus
ENSORLG00000013734	cnot1	97	91.549	ENSVPAG00000008846	CNOT1	97	91.549	Vicugna_pacos
ENSORLG00000013734	cnot1	100	89.386	ENSVVUG00000024037	CNOT1	100	93.042	Vulpes_vulpes
ENSORLG00000013734	cnot1	100	85.558	ENSXETG00000015900	cnot1	100	85.487	Xenopus_tropicalis
ENSORLG00000013734	cnot1	100	93.947	ENSXCOG00000013552	cnot1	100	93.947	Xiphophorus_couchianus
ENSORLG00000013734	cnot1	100	93.989	ENSXMAG00000006031	cnot1	100	93.989	Xiphophorus_maculatus