EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000013806 (Gene tree)
Gene ID: 110015008
Gene Symbol: gfi1ab
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3089 bases
Position: chr4:24102762-24105850
Accession: 110015008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017311	zf-C2H2	PF00096.26	1.2e-28	1	5
ENSORLP00000017311	zf-C2H2	PF00096.26	1.2e-28	2	5
ENSORLP00000017311	zf-C2H2	PF00096.26	1.2e-28	3	5
ENSORLP00000017311	zf-C2H2	PF00096.26	1.2e-28	4	5
ENSORLP00000017311	zf-C2H2	PF00096.26	1.2e-28	5	5
ENSORLP00000017311	zf-met	PF12874.7	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000017312	-	2020	XM_023954452	ENSORLP00000017311	380 (aa)	XP_023810220	H2MFD9

Gene Model

Click here to download ENSORLG00000013806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000013806	gfi1ab	61	41.259	ENSORLG00000027822	-	90	42.073
ENSORLG00000013806	gfi1ab	63	44.628	ENSORLG00000027982	-	98	44.628
ENSORLG00000013806	gfi1ab	58	34.595	ENSORLG00000009152	zbtb41	66	35.088
ENSORLG00000013806	gfi1ab	57	36.879	ENSORLG00000012610	znf710b	51	36.879
ENSORLG00000013806	gfi1ab	51	42.771	ENSORLG00000000262	-	96	42.262
ENSORLG00000013806	gfi1ab	52	42.336	ENSORLG00000000191	-	94	42.336
ENSORLG00000013806	gfi1ab	99	43.114	ENSORLG00000014390	GFI1B	96	43.114
ENSORLG00000013806	gfi1ab	51	36.464	ENSORLG00000021885	-	65	49.180
ENSORLG00000013806	gfi1ab	51	39.674	ENSORLG00000000253	-	97	41.463
ENSORLG00000013806	gfi1ab	56	42.754	ENSORLG00000029994	-	95	42.754
ENSORLG00000013806	gfi1ab	66	43.750	ENSORLG00000028091	-	89	47.222
ENSORLG00000013806	gfi1ab	73	42.515	ENSORLG00000019331	zbtb48	57	42.515
ENSORLG00000013806	gfi1ab	58	40.367	ENSORLG00000024255	si:dkey-89b17.4	52	40.367
ENSORLG00000013806	gfi1ab	63	42.857	ENSORLG00000022187	-	62	42.857
ENSORLG00000013806	gfi1ab	64	40.964	ENSORLG00000025576	-	91	40.964
ENSORLG00000013806	gfi1ab	55	44.275	ENSORLG00000007009	-	92	45.783
ENSORLG00000013806	gfi1ab	50	38.298	ENSORLG00000001615	-	74	37.888
ENSORLG00000013806	gfi1ab	52	34.375	ENSORLG00000028851	-	66	34.375
ENSORLG00000013806	gfi1ab	100	61.013	ENSORLG00000005060	GFI1	100	61.013
ENSORLG00000013806	gfi1ab	51	44.048	ENSORLG00000013344	znf574	56	38.406
ENSORLG00000013806	gfi1ab	51	46.988	ENSORLG00000007097	-	96	46.988
ENSORLG00000013806	gfi1ab	52	42.727	ENSORLG00000007885	znf646	71	42.727
ENSORLG00000013806	gfi1ab	53	46.018	ENSORLG00000029343	-	78	32.000
ENSORLG00000013806	gfi1ab	67	42.553	ENSORLG00000030655	-	100	42.553
ENSORLG00000013806	gfi1ab	52	41.558	ENSORLG00000024789	-	67	38.172
ENSORLG00000013806	gfi1ab	51	38.798	ENSORLG00000028168	-	89	38.798
ENSORLG00000013806	gfi1ab	65	43.452	ENSORLG00000024174	-	83	41.667
ENSORLG00000013806	gfi1ab	58	45.833	ENSORLG00000002268	-	89	45.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013806	gfi1ab	100	60.930	ENSG00000162676	GFI1	100	61.395	Homo_sapiens
ENSORLG00000013806	gfi1ab	100	78.626	ENSAPOG00000015189	gfi1ab	100	78.626	Acanthochromis_polyacanthus
ENSORLG00000013806	gfi1ab	100	78.553	ENSACIG00000016354	gfi1ab	100	78.553	Amphilophus_citrinellus
ENSORLG00000013806	gfi1ab	100	53.222	ENSAOCG00000008339	gfi1ab	100	56.079	Amphiprion_ocellaris
ENSORLG00000013806	gfi1ab	100	78.372	ENSAPEG00000023870	gfi1ab	100	78.372	Amphiprion_percula
ENSORLG00000013806	gfi1ab	100	74.740	ENSATEG00000009167	gfi1ab	89	74.740	Anabas_testudineus
ENSORLG00000013806	gfi1ab	86	64.265	ENSAPLG00000015700	GFI1	99	64.265	Anas_platyrhynchos
ENSORLG00000013806	gfi1ab	100	63.415	ENSACAG00000004498	GFI1	100	64.146	Anolis_carolinensis
ENSORLG00000013806	gfi1ab	100	61.163	ENSANAG00000019656	GFI1	100	61.163	Aotus_nancymaae
ENSORLG00000013806	gfi1ab	100	79.587	ENSACLG00000026458	gfi1ab	93	79.587	Astatotilapia_calliptera
ENSORLG00000013806	gfi1ab	100	55.000	ENSAMXG00000006669	GFI1	100	55.000	Astyanax_mexicanus
ENSORLG00000013806	gfi1ab	100	62.069	ENSAMXG00000039600	gfi1ab	100	62.069	Astyanax_mexicanus
ENSORLG00000013806	gfi1ab	100	60.471	ENSBTAG00000016723	GFI1	100	60.941	Bos_taurus
ENSORLG00000013806	gfi1ab	100	61.163	ENSCJAG00000017609	GFI1	100	61.882	Callithrix_jacchus
ENSORLG00000013806	gfi1ab	100	60.656	ENSCAFG00000020155	GFI1	100	61.124	Canis_familiaris
ENSORLG00000013806	gfi1ab	100	60.656	ENSCAFG00020013371	GFI1	88	61.124	Canis_lupus_dingo
ENSORLG00000013806	gfi1ab	100	60.235	ENSCHIG00000016135	GFI1	100	60.706	Capra_hircus
ENSORLG00000013806	gfi1ab	100	61.682	ENSCPOG00000011727	GFI1	100	62.383	Cavia_porcellus
ENSORLG00000013806	gfi1ab	100	60.930	ENSCCAG00000036072	GFI1	100	61.395	Cebus_capucinus
ENSORLG00000013806	gfi1ab	100	61.163	ENSCATG00000037873	GFI1	100	61.628	Cercocebus_atys
ENSORLG00000013806	gfi1ab	86	89.175	ENSCLAG00000005915	GFI1	100	58.257	Chinchilla_lanigera
ENSORLG00000013806	gfi1ab	99	55.645	ENSCSAG00000001469	GFI1	100	56.183	Chlorocebus_sabaeus
ENSORLG00000013806	gfi1ab	100	61.395	ENSCANG00000034077	GFI1	100	61.860	Colobus_angolensis_palliatus
ENSORLG00000013806	gfi1ab	100	59.859	ENSCGRG00001015432	Gfi1	100	58.726	Cricetulus_griseus_chok1gshd
ENSORLG00000013806	gfi1ab	100	60.349	ENSCSEG00000017729	GFI1	100	60.599	Cynoglossus_semilaevis
ENSORLG00000013806	gfi1ab	100	58.049	ENSCVAG00000004930	GFI1	100	60.000	Cyprinodon_variegatus
ENSORLG00000013806	gfi1ab	100	77.835	ENSCVAG00000011828	gfi1ab	100	77.835	Cyprinodon_variegatus
ENSORLG00000013806	gfi1ab	100	68.090	ENSDARG00000044457	gfi1ab	100	68.342	Danio_rerio
ENSORLG00000013806	gfi1ab	100	60.798	ENSDNOG00000000782	GFI1	97	61.737	Dasypus_novemcinctus
ENSORLG00000013806	gfi1ab	100	62.175	ENSEASG00005015509	GFI1	86	62.648	Equus_asinus_asinus
ENSORLG00000013806	gfi1ab	99	52.513	ENSECAG00000006647	GFI1	94	53.015	Equus_caballus
ENSORLG00000013806	gfi1ab	100	61.005	ENSEEUG00000000198	GFI1	100	61.667	Erinaceus_europaeus
ENSORLG00000013806	gfi1ab	100	68.844	ENSELUG00000003015	gfi1ab	99	68.844	Esox_lucius
ENSORLG00000013806	gfi1ab	100	60.302	ENSELUG00000019033	GFI1	100	60.902	Esox_lucius
ENSORLG00000013806	gfi1ab	100	60.890	ENSFCAG00000005914	GFI1	100	61.358	Felis_catus
ENSORLG00000013806	gfi1ab	71	78.899	ENSFHEG00000002747	-	69	61.585	Fundulus_heteroclitus
ENSORLG00000013806	gfi1ab	100	59.158	ENSFHEG00000000341	GFI1	100	61.881	Fundulus_heteroclitus
ENSORLG00000013806	gfi1ab	100	77.577	ENSFHEG00000010997	gfi1ab	100	77.577	Fundulus_heteroclitus
ENSORLG00000013806	gfi1ab	100	71.066	ENSGMOG00000007737	gfi1ab	100	71.066	Gadus_morhua
ENSORLG00000013806	gfi1ab	100	63.145	ENSGALG00000043650	GFI1	100	63.725	Gallus_gallus
ENSORLG00000013806	gfi1ab	100	78.772	ENSGAFG00000016637	gfi1ab	100	78.772	Gambusia_affinis
ENSORLG00000013806	gfi1ab	100	59.559	ENSGAFG00000018063	GFI1	100	61.179	Gambusia_affinis
ENSORLG00000013806	gfi1ab	100	77.979	ENSGACG00000004257	gfi1ab	97	78.238	Gasterosteus_aculeatus
ENSORLG00000013806	gfi1ab	100	60.930	ENSGGOG00000005320	GFI1	100	61.395	Gorilla_gorilla
ENSORLG00000013806	gfi1ab	100	77.778	ENSHBUG00000011969	gfi1ab	100	77.778	Haplochromis_burtoni
ENSORLG00000013806	gfi1ab	100	61.647	ENSHGLG00000008020	GFI1	100	62.118	Heterocephalus_glaber_female
ENSORLG00000013806	gfi1ab	100	61.647	ENSHGLG00100000610	GFI1	100	62.118	Heterocephalus_glaber_male
ENSORLG00000013806	gfi1ab	100	60.577	ENSHCOG00000008590	gfi1ab	100	60.577	Hippocampus_comes
ENSORLG00000013806	gfi1ab	100	59.079	ENSHCOG00000019555	GFI1	100	67.568	Hippocampus_comes
ENSORLG00000013806	gfi1ab	100	62.972	ENSIPUG00000010071	gfi1ab	87	64.322	Ictalurus_punctatus
ENSORLG00000013806	gfi1ab	100	60.354	ENSIPUG00000013414	GFI1	100	60.354	Ictalurus_punctatus
ENSORLG00000013806	gfi1ab	100	59.859	ENSSTOG00000014583	GFI1	100	60.094	Ictidomys_tridecemlineatus
ENSORLG00000013806	gfi1ab	100	77.979	ENSKMAG00000003810	gfi1ab	100	77.979	Kryptolebias_marmoratus
ENSORLG00000013806	gfi1ab	100	78.571	ENSLBEG00000027776	gfi1ab	100	78.571	Labrus_bergylta
ENSORLG00000013806	gfi1ab	99	46.457	ENSLACG00000017590	-	99	46.457	Latimeria_chalumnae
ENSORLG00000013806	gfi1ab	100	66.749	ENSLACG00000013362	GFI1	98	66.749	Latimeria_chalumnae
ENSORLG00000013806	gfi1ab	100	68.227	ENSLOCG00000004711	gfi1ab	100	68.473	Lepisosteus_oculatus
ENSORLG00000013806	gfi1ab	100	60.488	ENSLAFG00000018346	GFI1	100	61.165	Loxodonta_africana
ENSORLG00000013806	gfi1ab	100	61.163	ENSMFAG00000045801	GFI1	100	61.628	Macaca_fascicularis
ENSORLG00000013806	gfi1ab	100	61.163	ENSMNEG00000036338	GFI1	100	61.628	Macaca_nemestrina
ENSORLG00000013806	gfi1ab	100	61.163	ENSMLEG00000036181	GFI1	100	61.628	Mandrillus_leucophaeus
ENSORLG00000013806	gfi1ab	100	79.275	ENSMAMG00000008125	gfi1ab	100	79.275	Mastacembelus_armatus
ENSORLG00000013806	gfi1ab	100	79.845	ENSMZEG00005009895	gfi1ab	100	79.845	Maylandia_zebra
ENSORLG00000013806	gfi1ab	86	65.318	ENSMGAG00000008187	GFI1	99	65.318	Meleagris_gallopavo
ENSORLG00000013806	gfi1ab	100	60.094	ENSMICG00000047208	GFI1	100	60.094	Microcebus_murinus
ENSORLG00000013806	gfi1ab	100	72.051	ENSMMOG00000005556	gfi1ab	100	72.051	Mola_mola
ENSORLG00000013806	gfi1ab	100	58.933	ENSMODG00000011802	GFI1	100	59.722	Monodelphis_domestica
ENSORLG00000013806	gfi1ab	100	76.166	ENSMALG00000014672	gfi1ab	100	76.166	Monopterus_albus
ENSORLG00000013806	gfi1ab	100	60.187	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.037	Mus_caroli
ENSORLG00000013806	gfi1ab	100	60.187	ENSMUSG00000029275	Gfi1	100	60.656	Mus_musculus
ENSORLG00000013806	gfi1ab	100	59.953	MGP_PahariEiJ_G0017280	Gfi1	100	97.037	Mus_pahari
ENSORLG00000013806	gfi1ab	100	60.187	MGP_SPRETEiJ_G0028507	Gfi1	100	59.529	Mus_spretus
ENSORLG00000013806	gfi1ab	100	63.384	ENSMPUG00000004178	GFI1	97	63.131	Mustela_putorius_furo
ENSORLG00000013806	gfi1ab	100	60.377	ENSMLUG00000015191	GFI1	97	60.613	Myotis_lucifugus
ENSORLG00000013806	gfi1ab	100	77.041	ENSNBRG00000015774	gfi1ab	100	77.041	Neolamprologus_brichardi
ENSORLG00000013806	gfi1ab	86	62.567	ENSNLEG00000010470	GFI1	91	63.102	Nomascus_leucogenys
ENSORLG00000013806	gfi1ab	100	61.882	ENSOPRG00000001473	GFI1	100	62.353	Ochotona_princeps
ENSORLG00000013806	gfi1ab	100	79.587	ENSONIG00000019246	gfi1ab	100	79.587	Oreochromis_niloticus
ENSORLG00000013806	gfi1ab	98	54.865	ENSOCUG00000023553	GFI1	93	54.865	Oryctolagus_cuniculus
ENSORLG00000013806	gfi1ab	100	56.154	ENSORLG00020002817	GFI1	100	56.154	Oryzias_latipes_hni
ENSORLG00000013806	gfi1ab	100	98.425	ENSORLG00020001602	gfi1ab	100	98.425	Oryzias_latipes_hni
ENSORLG00000013806	gfi1ab	100	58.987	ENSORLG00015006070	GFI1	100	60.000	Oryzias_latipes_hsok
ENSORLG00000013806	gfi1ab	100	61.000	ENSOMEG00000016722	GFI1	100	61.772	Oryzias_melastigma
ENSORLG00000013806	gfi1ab	100	64.398	ENSOGAG00000027913	GFI1	100	64.398	Otolemur_garnettii
ENSORLG00000013806	gfi1ab	98	95.238	ENSOARG00000016329	GFI1	94	53.538	Ovis_aries
ENSORLG00000013806	gfi1ab	100	65.365	ENSPPAG00000042186	GFI1	100	65.885	Pan_paniscus
ENSORLG00000013806	gfi1ab	100	60.890	ENSPPRG00000007521	GFI1	100	61.358	Panthera_pardus
ENSORLG00000013806	gfi1ab	100	60.930	ENSPTRG00000043053	GFI1	100	61.395	Pan_troglodytes
ENSORLG00000013806	gfi1ab	100	61.163	ENSPANG00000016433	GFI1	100	61.628	Papio_anubis
ENSORLG00000013806	gfi1ab	100	69.500	ENSPKIG00000004263	GFI1	100	69.500	Paramormyrops_kingsleyae
ENSORLG00000013806	gfi1ab	85	65.015	ENSPSIG00000008734	GFI1	96	65.698	Pelodiscus_sinensis
ENSORLG00000013806	gfi1ab	99	91.667	ENSPMGG00000011041	GFI1	53	91.667	Periophthalmus_magnuspinnatus
ENSORLG00000013806	gfi1ab	100	74.479	ENSPMGG00000012546	gfi1ab	100	75.000	Periophthalmus_magnuspinnatus
ENSORLG00000013806	gfi1ab	100	61.905	ENSPCIG00000013728	GFI1	100	60.698	Phascolarctos_cinereus
ENSORLG00000013806	gfi1ab	100	77.749	ENSPFOG00000023214	gfi1ab	100	77.749	Poecilia_formosa
ENSORLG00000013806	gfi1ab	100	57.805	ENSPLAG00000005376	GFI1	91	60.644	Poecilia_latipinna
ENSORLG00000013806	gfi1ab	100	77.749	ENSPLAG00000010879	gfi1ab	100	77.749	Poecilia_latipinna
ENSORLG00000013806	gfi1ab	100	58.621	ENSPMEG00000019299	GFI1	100	61.500	Poecilia_mexicana
ENSORLG00000013806	gfi1ab	100	78.005	ENSPMEG00000013694	gfi1ab	100	78.005	Poecilia_mexicana
ENSORLG00000013806	gfi1ab	100	79.177	ENSPREG00000014097	gfi1ab	100	79.177	Poecilia_reticulata
ENSORLG00000013806	gfi1ab	100	55.181	ENSPREG00000007997	GFI1	100	55.181	Poecilia_reticulata
ENSORLG00000013806	gfi1ab	100	49.535	ENSPCAG00000011020	GFI1	100	49.535	Procavia_capensis
ENSORLG00000013806	gfi1ab	100	60.465	ENSPCOG00000020540	GFI1	100	60.706	Propithecus_coquereli
ENSORLG00000013806	gfi1ab	100	59.953	ENSPVAG00000006928	GFI1	100	60.900	Pteropus_vampyrus
ENSORLG00000013806	gfi1ab	100	79.587	ENSPNYG00000021183	gfi1ab	100	79.587	Pundamilia_nyererei
ENSORLG00000013806	gfi1ab	100	58.015	ENSPNAG00000028014	GFI1	100	58.015	Pygocentrus_nattereri
ENSORLG00000013806	gfi1ab	100	63.027	ENSPNAG00000027258	gfi1ab	100	63.027	Pygocentrus_nattereri
ENSORLG00000013806	gfi1ab	100	59.953	ENSRNOG00000002042	Gfi1	100	60.471	Rattus_norvegicus
ENSORLG00000013806	gfi1ab	100	61.163	ENSRBIG00000036467	GFI1	100	61.628	Rhinopithecus_bieti
ENSORLG00000013806	gfi1ab	100	61.163	ENSRROG00000031687	GFI1	100	61.628	Rhinopithecus_roxellana
ENSORLG00000013806	gfi1ab	100	61.163	ENSSBOG00000031300	GFI1	100	61.628	Saimiri_boliviensis_boliviensis
ENSORLG00000013806	gfi1ab	100	69.802	ENSSFOG00015020295	gfi1	100	69.802	Scleropages_formosus
ENSORLG00000013806	gfi1ab	99	41.775	ENSSFOG00015008114	-	98	41.995	Scleropages_formosus
ENSORLG00000013806	gfi1ab	100	75.959	ENSSMAG00000002782	gfi1ab	100	75.959	Scophthalmus_maximus
ENSORLG00000013806	gfi1ab	100	77.979	ENSSDUG00000022410	gfi1ab	100	78.238	Seriola_dumerili
ENSORLG00000013806	gfi1ab	100	77.979	ENSSLDG00000020163	gfi1ab	100	78.238	Seriola_lalandi_dorsalis
ENSORLG00000013806	gfi1ab	79	88.235	ENSSPAG00000009140	gfi1ab	100	88.235	Stegastes_partitus
ENSORLG00000013806	gfi1ab	100	61.045	ENSSSCG00000006902	GFI1	100	61.758	Sus_scrofa
ENSORLG00000013806	gfi1ab	86	65.706	ENSTGUG00000006060	GFI1	100	66.379	Taeniopygia_guttata
ENSORLG00000013806	gfi1ab	100	74.935	ENSTRUG00000000415	gfi1ab	100	74.935	Takifugu_rubripes
ENSORLG00000013806	gfi1ab	100	69.923	ENSTNIG00000000651	gfi1ab	97	70.361	Tetraodon_nigroviridis
ENSORLG00000013806	gfi1ab	100	60.757	ENSTTRG00000000082	GFI1	100	61.229	Tursiops_truncatus
ENSORLG00000013806	gfi1ab	100	62.195	ENSUAMG00000021124	GFI1	91	62.195	Ursus_americanus
ENSORLG00000013806	gfi1ab	100	61.347	ENSXETG00000023006	gfi1	98	61.347	Xenopus_tropicalis
ENSORLG00000013806	gfi1ab	100	77.892	ENSXMAG00000010523	gfi1ab	100	77.892	Xiphophorus_maculatus
ENSORLG00000013806	gfi1ab	85	52.691	ENSXMAG00000009274	GFI1	70	54.701	Xiphophorus_maculatus