EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000013827 (Gene tree)
Gene ID: 101164220
Gene Symbol: sall1a
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11585 bases
Position: chr3:30115450-30127034
Accession: 101164220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017336	zf-C2H2	PF00096.26	4.6e-37	1	7
ENSORLP00000017336	zf-C2H2	PF00096.26	4.6e-37	2	7
ENSORLP00000017336	zf-C2H2	PF00096.26	4.6e-37	3	7
ENSORLP00000017336	zf-C2H2	PF00096.26	4.6e-37	4	7
ENSORLP00000017336	zf-C2H2	PF00096.26	4.6e-37	5	7
ENSORLP00000017336	zf-C2H2	PF00096.26	4.6e-37	6	7
ENSORLP00000017336	zf-C2H2	PF00096.26	4.6e-37	7	7
ENSORLP00000017337	zf-C2H2	PF00096.26	5.6e-34	1	7
ENSORLP00000017337	zf-C2H2	PF00096.26	5.6e-34	2	7
ENSORLP00000017337	zf-C2H2	PF00096.26	5.6e-34	3	7
ENSORLP00000017337	zf-C2H2	PF00096.26	5.6e-34	4	7
ENSORLP00000017337	zf-C2H2	PF00096.26	5.6e-34	5	7
ENSORLP00000017337	zf-C2H2	PF00096.26	5.6e-34	6	7
ENSORLP00000017337	zf-C2H2	PF00096.26	5.6e-34	7	7
ENSORLP00000017336	zf-met	PF12874.7	4.7e-24	1	5
ENSORLP00000017336	zf-met	PF12874.7	4.7e-24	2	5
ENSORLP00000017336	zf-met	PF12874.7	4.7e-24	3	5
ENSORLP00000017336	zf-met	PF12874.7	4.7e-24	4	5
ENSORLP00000017336	zf-met	PF12874.7	4.7e-24	5	5
ENSORLP00000017337	zf-met	PF12874.7	1e-23	1	5
ENSORLP00000017337	zf-met	PF12874.7	1e-23	2	5
ENSORLP00000017337	zf-met	PF12874.7	1e-23	3	5
ENSORLP00000017337	zf-met	PF12874.7	1e-23	4	5
ENSORLP00000017337	zf-met	PF12874.7	1e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000017337	-	5856	-	ENSORLP00000017336	1184 (aa)	-	H2MFG4
ENSORLT00000017338	-	5745	XM_004067439	ENSORLP00000017337	1305 (aa)	XP_004067487	H2MFG5

Gene Model

Click here to download ENSORLG00000013827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000013827	sall1a	68	46.154	ENSORLG00000002268	-	94	46.154
ENSORLG00000013827	sall1a	52	52.000	ENSORLG00000024652	-	95	50.000
ENSORLG00000013827	sall1a	99	44.636	ENSORLG00000020718	sall3a	100	63.265
ENSORLG00000013827	sall1a	56	46.296	ENSORLG00000026463	-	63	44.643
ENSORLG00000013827	sall1a	99	65.385	ENSORLG00000016130	sall4	99	65.385
ENSORLG00000013827	sall1a	54	42.857	ENSORLG00000028323	-	95	42.857
ENSORLG00000013827	sall1a	50	46.296	ENSORLG00000007885	znf646	50	46.296
ENSORLG00000013827	sall1a	63	63.855	ENSORLG00000024765	-	88	75.926
ENSORLG00000013827	sall1a	63	48.936	ENSORLG00000010117	-	88	49.020
ENSORLG00000013827	sall1a	63	51.020	ENSORLG00000007097	-	95	51.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013827	sall1a	99	67.886	ENSG00000103449	SALL1	100	67.812	Homo_sapiens
ENSORLG00000013827	sall1a	100	92.314	ENSAPOG00000022764	sall1a	100	91.813	Acanthochromis_polyacanthus
ENSORLG00000013827	sall1a	97	69.179	ENSAMEG00000006817	SALL1	100	66.716	Ailuropoda_melanoleuca
ENSORLG00000013827	sall1a	100	90.878	ENSACIG00000004231	sall1a	100	90.513	Amphilophus_citrinellus
ENSORLG00000013827	sall1a	100	92.736	ENSAOCG00000002800	sall1a	100	92.196	Amphiprion_ocellaris
ENSORLG00000013827	sall1a	100	92.483	ENSAPEG00000010179	sall1a	100	91.890	Amphiprion_percula
ENSORLG00000013827	sall1a	99	90.871	ENSATEG00000003006	sall1a	99	90.413	Anabas_testudineus
ENSORLG00000013827	sall1a	100	69.242	ENSAPLG00000003356	SALL1	100	69.294	Anas_platyrhynchos
ENSORLG00000013827	sall1a	99	68.567	ENSACAG00000014399	SALL1	97	66.995	Anolis_carolinensis
ENSORLG00000013827	sall1a	99	67.838	ENSANAG00000027238	SALL1	100	68.111	Aotus_nancymaae
ENSORLG00000013827	sall1a	100	91.216	ENSACLG00000017148	sall1a	100	90.819	Astatotilapia_calliptera
ENSORLG00000013827	sall1a	99	51.141	ENSAMXG00000017702	sall1b	99	51.393	Astyanax_mexicanus
ENSORLG00000013827	sall1a	100	80.269	ENSAMXG00000018599	sall1a	100	79.985	Astyanax_mexicanus
ENSORLG00000013827	sall1a	100	67.440	ENSBTAG00000008544	SALL1	100	67.566	Bos_taurus
ENSORLG00000013827	sall1a	99	68.138	ENSCJAG00000001740	SALL1	100	68.335	Callithrix_jacchus
ENSORLG00000013827	sall1a	99	66.891	ENSCAFG00000009755	SALL1	100	67.341	Canis_familiaris
ENSORLG00000013827	sall1a	99	66.891	ENSCAFG00020002842	SALL1	100	67.341	Canis_lupus_dingo
ENSORLG00000013827	sall1a	100	66.890	ENSCHIG00000026074	SALL1	100	67.063	Capra_hircus
ENSORLG00000013827	sall1a	99	67.862	ENSTSYG00000029464	SALL1	100	67.788	Carlito_syrichta
ENSORLG00000013827	sall1a	97	69.718	ENSCPOG00000006564	SALL1	99	67.565	Cavia_porcellus
ENSORLG00000013827	sall1a	99	65.819	ENSCCAG00000001639	SALL1	100	66.318	Cebus_capucinus
ENSORLG00000013827	sall1a	99	68.063	ENSCATG00000004982	SALL1	100	68.185	Cercocebus_atys
ENSORLG00000013827	sall1a	97	69.355	ENSCLAG00000006380	SALL1	100	66.815	Chinchilla_lanigera
ENSORLG00000013827	sall1a	99	67.464	ENSCSAG00000005319	SALL1	100	67.513	Chlorocebus_sabaeus
ENSORLG00000013827	sall1a	65	70.682	ENSCHOG00000000800	-	69	67.059	Choloepus_hoffmanni
ENSORLG00000013827	sall1a	100	68.816	ENSCPBG00000015924	SALL1	100	69.017	Chrysemys_picta_bellii
ENSORLG00000013827	sall1a	99	68.287	ENSCANG00000036664	SALL1	100	68.212	Colobus_angolensis_palliatus
ENSORLG00000013827	sall1a	98	68.350	ENSCGRG00001023314	-	100	66.766	Cricetulus_griseus_chok1gshd
ENSORLG00000013827	sall1a	98	68.350	ENSCGRG00000009496	Sall1	100	66.717	Cricetulus_griseus_crigri
ENSORLG00000013827	sall1a	99	88.964	ENSCSEG00000009349	sall1a	99	88.092	Cynoglossus_semilaevis
ENSORLG00000013827	sall1a	90	89.252	ENSCVAG00000020513	sall1a	99	89.252	Cyprinodon_variegatus
ENSORLG00000013827	sall1a	100	78.894	ENSDARG00000074319	sall1a	100	77.736	Danio_rerio
ENSORLG00000013827	sall1a	99	47.705	ENSDARG00000075891	sall1b	99	46.781	Danio_rerio
ENSORLG00000013827	sall1a	97	70.323	ENSDNOG00000016413	SALL1	100	68.111	Dasypus_novemcinctus
ENSORLG00000013827	sall1a	97	69.761	ENSETEG00000015150	SALL1	99	67.177	Echinops_telfairi
ENSORLG00000013827	sall1a	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSORLG00000013827	sall1a	69	42.608	ENSEBUG00000008798	SALL1	94	36.537	Eptatretus_burgeri
ENSORLG00000013827	sall1a	96	70.112	ENSEASG00005014602	SALL1	100	67.640	Equus_asinus_asinus
ENSORLG00000013827	sall1a	90	64.988	ENSECAG00000011334	SALL1	99	65.566	Equus_caballus
ENSORLG00000013827	sall1a	96	70.533	ENSEEUG00000002014	SALL1	100	67.735	Erinaceus_europaeus
ENSORLG00000013827	sall1a	100	54.296	ENSELUG00000017774	-	100	54.836	Esox_lucius
ENSORLG00000013827	sall1a	100	77.129	ENSELUG00000006159	sall1a	100	77.083	Esox_lucius
ENSORLG00000013827	sall1a	100	65.969	ENSFCAG00000024654	SALL1	100	66.492	Felis_catus
ENSORLG00000013827	sall1a	100	69.346	ENSFALG00000000074	SALL1	100	69.098	Ficedula_albicollis
ENSORLG00000013827	sall1a	79	65.854	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSORLG00000013827	sall1a	100	91.132	ENSFHEG00000012579	sall1a	100	90.360	Fundulus_heteroclitus
ENSORLG00000013827	sall1a	97	40.879	ENSGMOG00000013383	-	99	40.565	Gadus_morhua
ENSORLG00000013827	sall1a	100	82.843	ENSGMOG00000006103	sall1a	100	82.470	Gadus_morhua
ENSORLG00000013827	sall1a	100	69.670	ENSGALG00000039238	SALL1	100	69.520	Gallus_gallus
ENSORLG00000013827	sall1a	100	91.147	ENSGAFG00000009964	sall1a	100	90.527	Gambusia_affinis
ENSORLG00000013827	sall1a	99	89.180	ENSGACG00000016702	sall1a	99	88.515	Gasterosteus_aculeatus
ENSORLG00000013827	sall1a	100	68.891	ENSGAGG00000013979	SALL1	100	69.092	Gopherus_agassizii
ENSORLG00000013827	sall1a	99	68.111	ENSGGOG00000000663	SALL1	100	68.036	Gorilla_gorilla
ENSORLG00000013827	sall1a	100	91.132	ENSHBUG00000022005	sall1a	100	90.742	Haplochromis_burtoni
ENSORLG00000013827	sall1a	97	69.617	ENSHGLG00000004288	-	100	67.562	Heterocephalus_glaber_female
ENSORLG00000013827	sall1a	97	69.617	ENSHGLG00100017496	SALL1	100	67.562	Heterocephalus_glaber_male
ENSORLG00000013827	sall1a	100	83.820	ENSHCOG00000000974	sall1a	100	83.283	Hippocampus_comes
ENSORLG00000013827	sall1a	100	79.597	ENSIPUG00000016265	SALL1	100	78.370	Ictalurus_punctatus
ENSORLG00000013827	sall1a	97	52.446	ENSIPUG00000022928	sall1b	99	50.075	Ictalurus_punctatus
ENSORLG00000013827	sall1a	99	68.237	ENSSTOG00000020885	SALL1	100	68.202	Ictidomys_tridecemlineatus
ENSORLG00000013827	sall1a	100	91.723	ENSKMAG00000016681	sall1a	100	90.895	Kryptolebias_marmoratus
ENSORLG00000013827	sall1a	99	88.776	ENSLBEG00000012207	sall1a	95	88.097	Labrus_bergylta
ENSORLG00000013827	sall1a	100	68.740	ENSLACG00000003556	SALL1	100	68.774	Latimeria_chalumnae
ENSORLG00000013827	sall1a	60	40.868	ENSLACG00000014018	-	93	39.968	Latimeria_chalumnae
ENSORLG00000013827	sall1a	100	77.583	ENSLOCG00000007283	sall1b	100	77.173	Lepisosteus_oculatus
ENSORLG00000013827	sall1a	97	70.017	ENSLAFG00000015251	SALL1	100	67.727	Loxodonta_africana
ENSORLG00000013827	sall1a	99	68.161	ENSMFAG00000003298	SALL1	100	68.185	Macaca_fascicularis
ENSORLG00000013827	sall1a	96	70.231	ENSMMUG00000017200	SALL1	99	68.277	Macaca_mulatta
ENSORLG00000013827	sall1a	96	70.231	ENSMNEG00000034770	SALL1	99	68.196	Macaca_nemestrina
ENSORLG00000013827	sall1a	99	68.287	ENSMLEG00000036406	SALL1	100	68.185	Mandrillus_leucophaeus
ENSORLG00000013827	sall1a	99	91.470	ENSMAMG00000004164	sall1a	99	91.082	Mastacembelus_armatus
ENSORLG00000013827	sall1a	100	91.216	ENSMZEG00005006479	sall1a	100	90.819	Maylandia_zebra
ENSORLG00000013827	sall1a	97	71.575	ENSMGAG00000004704	SALL1	100	69.243	Meleagris_gallopavo
ENSORLG00000013827	sall1a	100	66.567	ENSMAUG00000019093	Sall1	100	66.493	Mesocricetus_auratus
ENSORLG00000013827	sall1a	100	67.341	ENSMICG00000036486	SALL1	100	67.391	Microcebus_murinus
ENSORLG00000013827	sall1a	99	90.025	ENSMMOG00000016400	sall1a	99	89.510	Mola_mola
ENSORLG00000013827	sall1a	97	70.709	ENSMODG00000013114	SALL1	99	68.464	Monodelphis_domestica
ENSORLG00000013827	sall1a	99	90.871	ENSMALG00000013400	sall1a	99	90.199	Monopterus_albus
ENSORLG00000013827	sall1a	100	66.568	MGP_CAROLIEiJ_G0031362	Sall1	100	66.543	Mus_caroli
ENSORLG00000013827	sall1a	100	66.320	ENSMUSG00000031665	Sall1	100	66.395	Mus_musculus
ENSORLG00000013827	sall1a	98	68.033	MGP_PahariEiJ_G0022961	Sall1	100	66.148	Mus_pahari
ENSORLG00000013827	sall1a	98	68.007	MGP_SPRETEiJ_G0032480	Sall1	100	66.395	Mus_spretus
ENSORLG00000013827	sall1a	97	69.021	ENSMPUG00000003265	SALL1	96	66.261	Mustela_putorius_furo
ENSORLG00000013827	sall1a	96	67.888	ENSMLUG00000015541	SALL1	99	65.826	Myotis_lucifugus
ENSORLG00000013827	sall1a	100	91.470	ENSNBRG00000009307	sall1a	100	90.972	Neolamprologus_brichardi
ENSORLG00000013827	sall1a	93	81.564	ENSNLEG00000001008	SALL1	99	81.111	Nomascus_leucogenys
ENSORLG00000013827	sall1a	99	68.499	ENSMEUG00000012206	SALL1	99	68.346	Notamacropus_eugenii
ENSORLG00000013827	sall1a	86	72.647	ENSOPRG00000005645	SALL1	71	72.312	Ochotona_princeps
ENSORLG00000013827	sall1a	97	69.744	ENSODEG00000003685	SALL1	100	67.440	Octodon_degus
ENSORLG00000013827	sall1a	100	91.554	ENSONIG00000002831	sall1a	100	91.125	Oreochromis_niloticus
ENSORLG00000013827	sall1a	96	67.513	ENSOANG00000013399	SALL1	96	77.959	Ornithorhynchus_anatinus
ENSORLG00000013827	sall1a	100	99.831	ENSORLG00020020570	sall1a	100	99.770	Oryzias_latipes_hni
ENSORLG00000013827	sall1a	100	99.578	ENSORLG00015018830	sall1a	100	99.578	Oryzias_latipes_hsok
ENSORLG00000013827	sall1a	100	97.720	ENSOMEG00000016043	sall1a	100	97.192	Oryzias_melastigma
ENSORLG00000013827	sall1a	100	67.812	ENSOGAG00000027316	SALL1	100	67.862	Otolemur_garnettii
ENSORLG00000013827	sall1a	100	63.426	ENSOARG00000017583	SALL1	100	63.217	Ovis_aries
ENSORLG00000013827	sall1a	96	70.145	ENSPPAG00000035657	SALL1	100	68.012	Pan_paniscus
ENSORLG00000013827	sall1a	99	50.226	ENSPPAG00000035136	-	99	50.604	Pan_paniscus
ENSORLG00000013827	sall1a	100	66.043	ENSPPRG00000023283	SALL1	100	66.774	Panthera_pardus
ENSORLG00000013827	sall1a	84	71.053	ENSPTIG00000013539	-	94	71.078	Panthera_tigris_altaica
ENSORLG00000013827	sall1a	98	50.422	ENSPTRG00000045256	-	99	50.807	Pan_troglodytes
ENSORLG00000013827	sall1a	99	67.913	ENSPTRG00000008108	SALL1	100	67.934	Pan_troglodytes
ENSORLG00000013827	sall1a	99	68.212	ENSPANG00000024176	SALL1	100	68.111	Papio_anubis
ENSORLG00000013827	sall1a	100	70.106	ENSPKIG00000005383	-	100	70.258	Paramormyrops_kingsleyae
ENSORLG00000013827	sall1a	100	72.705	ENSPKIG00000022251	sall1a	100	71.612	Paramormyrops_kingsleyae
ENSORLG00000013827	sall1a	100	69.271	ENSPSIG00000008582	SALL1	100	69.248	Pelodiscus_sinensis
ENSORLG00000013827	sall1a	99	85.738	ENSPMGG00000021788	sall1a	99	83.233	Periophthalmus_magnuspinnatus
ENSORLG00000013827	sall1a	99	68.632	ENSPCIG00000017840	SALL1	99	68.346	Phascolarctos_cinereus
ENSORLG00000013827	sall1a	100	91.231	ENSPFOG00000015799	sall1a	96	90.365	Poecilia_formosa
ENSORLG00000013827	sall1a	100	91.315	ENSPLAG00000022539	sall1a	100	90.680	Poecilia_latipinna
ENSORLG00000013827	sall1a	100	91.400	ENSPMEG00000020894	sall1a	100	90.833	Poecilia_mexicana
ENSORLG00000013827	sall1a	100	90.809	ENSPREG00000006802	sall1a	100	90.222	Poecilia_reticulata
ENSORLG00000013827	sall1a	90	66.974	ENSPPYG00000007345	SALL1	96	66.889	Pongo_abelii
ENSORLG00000013827	sall1a	86	69.291	ENSPCAG00000008162	SALL1	93	69.358	Procavia_capensis
ENSORLG00000013827	sall1a	100	67.116	ENSPCOG00000028192	SALL1	100	67.590	Propithecus_coquereli
ENSORLG00000013827	sall1a	74	69.861	ENSPVAG00000015374	SALL1	100	69.942	Pteropus_vampyrus
ENSORLG00000013827	sall1a	100	91.301	ENSPNYG00000010865	sall1a	100	90.895	Pundamilia_nyererei
ENSORLG00000013827	sall1a	72	65.306	ENSPNAG00000028248	-	83	65.306	Pygocentrus_nattereri
ENSORLG00000013827	sall1a	100	78.188	ENSPNAG00000023644	sall1a	100	78.023	Pygocentrus_nattereri
ENSORLG00000013827	sall1a	99	52.826	ENSPNAG00000007442	sall1b	99	53.017	Pygocentrus_nattereri
ENSORLG00000013827	sall1a	100	66.542	ENSRNOG00000013907	Sall1	100	66.766	Rattus_norvegicus
ENSORLG00000013827	sall1a	96	70.205	ENSRBIG00000015707	SALL1	99	68.003	Rhinopithecus_bieti
ENSORLG00000013827	sall1a	96	70.231	ENSRROG00000035777	SALL1	99	68.203	Rhinopithecus_roxellana
ENSORLG00000013827	sall1a	99	68.012	ENSSBOG00000032186	SALL1	100	68.185	Saimiri_boliviensis_boliviensis
ENSORLG00000013827	sall1a	97	70.523	ENSSHAG00000009477	SALL1	99	68.120	Sarcophilus_harrisii
ENSORLG00000013827	sall1a	99	74.728	ENSSFOG00015020020	sall1a	100	72.521	Scleropages_formosus
ENSORLG00000013827	sall1a	100	71.703	ENSSFOG00015001590	sall1a	99	70.779	Scleropages_formosus
ENSORLG00000013827	sall1a	99	91.462	ENSSMAG00000009160	sall1a	99	90.735	Scophthalmus_maximus
ENSORLG00000013827	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSORLG00000013827	sall1a	99	92.984	ENSSDUG00000006507	sall1a	99	92.479	Seriola_dumerili
ENSORLG00000013827	sall1a	63	88.235	ENSSLDG00000014465	-	80	88.235	Seriola_lalandi_dorsalis
ENSORLG00000013827	sall1a	99	93.153	ENSSLDG00000017721	sall1a	99	92.496	Seriola_lalandi_dorsalis
ENSORLG00000013827	sall1a	96	69.684	ENSSARG00000000661	SALL1	99	67.510	Sorex_araneus
ENSORLG00000013827	sall1a	100	68.243	ENSSPUG00000000156	SALL1	100	68.520	Sphenodon_punctatus
ENSORLG00000013827	sall1a	100	93.249	ENSSPAG00000021615	sall1a	100	92.813	Stegastes_partitus
ENSORLG00000013827	sall1a	100	66.791	ENSSSCG00000002836	SALL1	100	66.841	Sus_scrofa
ENSORLG00000013827	sall1a	100	69.046	ENSTGUG00000007514	SALL1	100	68.896	Taeniopygia_guttata
ENSORLG00000013827	sall1a	91	85.941	ENSTRUG00000008950	sall1a	100	85.941	Takifugu_rubripes
ENSORLG00000013827	sall1a	92	84.667	ENSTNIG00000004257	sall1a	100	84.667	Tetraodon_nigroviridis
ENSORLG00000013827	sall1a	69	76.712	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSORLG00000013827	sall1a	90	65.604	ENSUAMG00000023379	-	92	65.664	Ursus_americanus
ENSORLG00000013827	sall1a	90	65.578	ENSVVUG00000019383	-	99	65.695	Vulpes_vulpes
ENSORLG00000013827	sall1a	63	37.838	ENSXETG00000017176	sall2	59	46.203	Xenopus_tropicalis
ENSORLG00000013827	sall1a	99	67.672	ENSXETG00000018417	sall1	100	65.004	Xenopus_tropicalis
ENSORLG00000013827	sall1a	100	91.231	ENSXMAG00000016273	sall1a	100	90.767	Xiphophorus_maculatus