EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000013938 (Gene tree)
Gene ID: 101156358
Gene Symbol: rab11bb
Alias: -
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4981 bases
Position: chr17:21229039-21234019
Accession: 101156358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017474	MMR_HSR1	PF01926.23	3.5e-07	1	1
ENSORLP00000035081	MMR_HSR1	PF01926.23	7.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031099	-	1025	-	ENSORLP00000035081	234 (aa)	-	-
ENSORLT00000017475	-	978	XM_023964990	ENSORLP00000017474	218 (aa)	XP_023820758	H2MFU7

Gene Model

Click here to download ENSORLG00000013938's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000013938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000013938	rab11bb	78	39.205	ENSORLG00000006628	-	82	39.205
ENSORLG00000013938	rab11bb	72	40.491	ENSORLG00000001351	-	78	40.491
ENSORLG00000013938	rab11bb	50	30.328	ENSORLG00000013843	arl4cb	62	30.328
ENSORLG00000013938	rab11bb	77	52.096	ENSORLG00000029921	-	78	52.096
ENSORLG00000013938	rab11bb	76	53.012	ENSORLG00000021846	-	82	53.012
ENSORLG00000013938	rab11bb	68	36.667	ENSORLG00000024443	zgc:55558	87	37.195
ENSORLG00000013938	rab11bb	74	41.358	ENSORLG00000024116	RAB15	78	41.358
ENSORLG00000013938	rab11bb	94	42.029	ENSORLG00000012261	rab5aa	90	42.029
ENSORLG00000013938	rab11bb	68	35.333	ENSORLG00000018912	hrasb	86	35.976
ENSORLG00000013938	rab11bb	99	61.290	ENSORLG00000012158	rab25a	99	61.290
ENSORLG00000013938	rab11bb	77	46.746	ENSORLG00000001850	RAB39B	81	46.512
ENSORLG00000013938	rab11bb	79	46.821	ENSORLG00000025395	-	87	46.821
ENSORLG00000013938	rab11bb	72	34.146	ENSORLG00000000937	-	76	34.146
ENSORLG00000013938	rab11bb	73	44.720	ENSORLG00000024558	-	66	45.161
ENSORLG00000013938	rab11bb	78	39.884	ENSORLG00000030642	zgc:101559	74	39.884
ENSORLG00000013938	rab11bb	96	40.476	ENSORLG00000029812	rab30	97	40.476
ENSORLG00000013938	rab11bb	82	38.587	ENSORLG00000030566	rab33a	68	37.368
ENSORLG00000013938	rab11bb	96	43.541	ENSORLG00000028885	rab35b	99	43.541
ENSORLG00000013938	rab11bb	72	32.099	ENSORLG00000025098	si:dkey-13a21.4	80	32.099
ENSORLG00000013938	rab11bb	78	37.500	ENSORLG00000030109	rab33ba	77	37.500
ENSORLG00000013938	rab11bb	76	34.302	ENSORLG00000027892	RAB29	83	34.302
ENSORLG00000013938	rab11bb	84	41.935	ENSORLG00000022335	rab42a	85	41.935
ENSORLG00000013938	rab11bb	72	37.580	ENSORLG00000026197	rab6a	75	37.580
ENSORLG00000013938	rab11bb	83	41.758	ENSORLG00000003902	rab12	84	38.426
ENSORLG00000013938	rab11bb	96	39.234	ENSORLG00000001098	si:dkey-16l2.16	97	39.234
ENSORLG00000013938	rab11bb	77	52.695	ENSORLG00000007406	rab14	78	52.695
ENSORLG00000013938	rab11bb	99	95.392	ENSORLG00000015284	-	72	95.392
ENSORLG00000013938	rab11bb	59	30.070	ENSORLG00000027941	arl8ba	70	30.070
ENSORLG00000013938	rab11bb	72	36.306	ENSORLG00000016290	rab6bb	80	35.669
ENSORLG00000013938	rab11bb	79	38.372	ENSORLG00000016555	rab3db	81	38.690
ENSORLG00000013938	rab11bb	96	44.762	ENSORLG00000000602	zgc:171927	99	44.762
ENSORLG00000013938	rab11bb	72	37.580	ENSORLG00000027669	RAB41	74	37.580
ENSORLG00000013938	rab11bb	99	83.028	ENSORLG00000016126	rab11al	99	83.028
ENSORLG00000013938	rab11bb	79	34.302	ENSORLG00000010115	rab23	79	36.196
ENSORLG00000013938	rab11bb	72	34.591	ENSORLG00000009874	rabl2	68	34.591
ENSORLG00000013938	rab11bb	75	33.728	ENSORLG00000024102	kras	95	34.807
ENSORLG00000013938	rab11bb	96	31.818	ENSORLG00000014099	si:dkey-34d22.5	98	31.818
ENSORLG00000013938	rab11bb	75	30.488	ENSORLG00000025819	-	89	30.488
ENSORLG00000013938	rab11bb	78	54.386	ENSORLG00000013432	rab2a	81	54.386
ENSORLG00000013938	rab11bb	74	45.679	ENSORLG00000004624	rab18a	80	45.122
ENSORLG00000013938	rab11bb	79	46.286	ENSORLG00000008345	-	82	46.286
ENSORLG00000013938	rab11bb	74	44.444	ENSORLG00000010846	rab15	76	44.444
ENSORLG00000013938	rab11bb	79	31.638	ENSORLG00000025519	rras	96	32.804
ENSORLG00000013938	rab11bb	73	32.500	ENSORLG00000003681	rheb	86	32.500
ENSORLG00000013938	rab11bb	81	71.186	ENSORLG00000016135	rab25b	86	71.429
ENSORLG00000013938	rab11bb	75	46.626	ENSORLG00000003882	rab5c	90	41.748
ENSORLG00000013938	rab11bb	96	45.972	ENSORLG00000028104	rab1ab	99	45.972
ENSORLG00000013938	rab11bb	100	87.615	ENSORLG00000018331	RAB11A	100	87.615
ENSORLG00000013938	rab11bb	70	34.615	ENSORLG00000004394	rab34a	59	34.615
ENSORLG00000013938	rab11bb	99	94.470	ENSORLG00000015307	rab11ba	99	94.470
ENSORLG00000013938	rab11bb	68	41.935	ENSORLG00000002071	-	64	41.935
ENSORLG00000013938	rab11bb	76	40.000	ENSORLG00000017806	rab9a	87	40.000
ENSORLG00000013938	rab11bb	85	38.947	ENSORLG00000006405	rab9b	90	38.947
ENSORLG00000013938	rab11bb	84	42.703	ENSORLG00000009609	rab18b	86	42.703
ENSORLG00000013938	rab11bb	72	40.491	ENSORLG00000029090	-	79	40.491
ENSORLG00000013938	rab11bb	74	33.742	ENSORLG00000018119	si:ch73-116o1.2	83	34.637

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000013938	rab11bb	100	99.541	ENSAPOG00000023455	rab11bb	100	99.541	Acanthochromis_polyacanthus
ENSORLG00000013938	rab11bb	100	97.248	ENSACIG00000024376	-	100	97.248	Amphilophus_citrinellus
ENSORLG00000013938	rab11bb	100	86.697	ENSACIG00000019631	rab11bb	100	86.697	Amphilophus_citrinellus
ENSORLG00000013938	rab11bb	100	99.541	ENSAOCG00000018239	rab11bb	100	99.541	Amphiprion_ocellaris
ENSORLG00000013938	rab11bb	100	97.248	ENSAOCG00000018849	-	100	97.248	Amphiprion_ocellaris
ENSORLG00000013938	rab11bb	100	99.541	ENSAPEG00000016590	rab11bb	100	99.541	Amphiprion_percula
ENSORLG00000013938	rab11bb	100	99.541	ENSATEG00000017696	rab11bb	100	99.541	Anabas_testudineus
ENSORLG00000013938	rab11bb	100	97.706	ENSATEG00000023725	-	100	97.706	Anabas_testudineus
ENSORLG00000013938	rab11bb	94	97.573	ENSAPLG00000011046	-	98	94.836	Anas_platyrhynchos
ENSORLG00000013938	rab11bb	100	99.541	ENSACLG00000007076	rab11bb	100	99.541	Astatotilapia_calliptera
ENSORLG00000013938	rab11bb	100	97.248	ENSACLG00000005446	-	100	97.248	Astatotilapia_calliptera
ENSORLG00000013938	rab11bb	100	96.330	ENSAMXG00000037623	-	100	96.330	Astyanax_mexicanus
ENSORLG00000013938	rab11bb	100	98.165	ENSAMXG00000042655	rab11bb	100	98.165	Astyanax_mexicanus
ENSORLG00000013938	rab11bb	100	95.872	ENSBTAG00000002475	RAB11B	100	95.872	Bos_taurus
ENSORLG00000013938	rab11bb	96	94.258	ENSCHIG00000022426	-	92	96.098	Capra_hircus
ENSORLG00000013938	rab11bb	100	95.872	ENSCATG00000029188	-	100	95.872	Cercocebus_atys
ENSORLG00000013938	rab11bb	100	96.789	ENSCPBG00000017056	-	100	96.789	Chrysemys_picta_bellii
ENSORLG00000013938	rab11bb	100	99.541	ENSCSEG00000012149	rab11bb	100	99.541	Cynoglossus_semilaevis
ENSORLG00000013938	rab11bb	100	96.789	ENSCSEG00000007239	-	100	96.789	Cynoglossus_semilaevis
ENSORLG00000013938	rab11bb	100	99.541	ENSCVAG00000017021	-	100	99.541	Cyprinodon_variegatus
ENSORLG00000013938	rab11bb	100	94.037	ENSCVAG00000019751	-	100	94.037	Cyprinodon_variegatus
ENSORLG00000013938	rab11bb	100	96.330	ENSCVAG00000019718	-	100	96.330	Cyprinodon_variegatus
ENSORLG00000013938	rab11bb	100	97.706	ENSDARG00000090086	rab11bb	100	97.706	Danio_rerio
ENSORLG00000013938	rab11bb	99	94.470	ENSETEG00000000905	-	99	94.470	Echinops_telfairi
ENSORLG00000013938	rab11bb	99	94.419	ENSEASG00005003708	-	99	94.419	Equus_asinus_asinus
ENSORLG00000013938	rab11bb	99	94.419	ENSECAG00000000716	RAB11B	99	94.419	Equus_caballus
ENSORLG00000013938	rab11bb	100	94.954	ENSELUG00000000916	-	100	94.954	Esox_lucius
ENSORLG00000013938	rab11bb	100	97.706	ENSELUG00000021148	rab11bb	100	97.706	Esox_lucius
ENSORLG00000013938	rab11bb	100	95.872	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSORLG00000013938	rab11bb	100	96.789	ENSFALG00000011828	-	100	96.789	Ficedula_albicollis
ENSORLG00000013938	rab11bb	100	99.541	ENSFHEG00000018353	rab11bb	100	99.541	Fundulus_heteroclitus
ENSORLG00000013938	rab11bb	100	97.706	ENSFHEG00000022676	-	100	97.706	Fundulus_heteroclitus
ENSORLG00000013938	rab11bb	99	93.056	ENSGMOG00000009668	-	99	93.056	Gadus_morhua
ENSORLG00000013938	rab11bb	100	99.083	ENSGMOG00000009211	rab11bb	100	99.083	Gadus_morhua
ENSORLG00000013938	rab11bb	100	96.789	ENSGALG00000000613	RAB11B	100	96.789	Gallus_gallus
ENSORLG00000013938	rab11bb	100	99.541	ENSGAFG00000007102	rab11bb	100	99.541	Gambusia_affinis
ENSORLG00000013938	rab11bb	100	99.083	ENSGACG00000015479	rab11bb	100	99.083	Gasterosteus_aculeatus
ENSORLG00000013938	rab11bb	100	94.037	ENSGACG00000013297	-	99	94.037	Gasterosteus_aculeatus
ENSORLG00000013938	rab11bb	100	95.872	ENSGGOG00000014516	RAB11B	100	95.872	Gorilla_gorilla
ENSORLG00000013938	rab11bb	100	99.541	ENSHBUG00000014777	rab11bb	100	99.541	Haplochromis_burtoni
ENSORLG00000013938	rab11bb	100	97.248	ENSHBUG00000009947	-	100	97.248	Haplochromis_burtoni
ENSORLG00000013938	rab11bb	100	99.083	ENSHCOG00000002423	rab11bb	100	99.083	Hippocampus_comes
ENSORLG00000013938	rab11bb	100	94.954	ENSHCOG00000000954	-	100	94.954	Hippocampus_comes
ENSORLG00000013938	rab11bb	100	93.119	ENSHCOG00000000985	-	100	93.119	Hippocampus_comes
ENSORLG00000013938	rab11bb	100	98.624	ENSIPUG00000019927	rab11bb	100	98.624	Ictalurus_punctatus
ENSORLG00000013938	rab11bb	100	96.789	ENSIPUG00000025100	rab11b	100	96.789	Ictalurus_punctatus
ENSORLG00000013938	rab11bb	100	97.248	ENSKMAG00000006170	-	100	97.248	Kryptolebias_marmoratus
ENSORLG00000013938	rab11bb	100	99.541	ENSKMAG00000009033	rab11bb	100	99.541	Kryptolebias_marmoratus
ENSORLG00000013938	rab11bb	100	96.330	ENSLBEG00000004172	-	100	96.330	Labrus_bergylta
ENSORLG00000013938	rab11bb	100	88.991	ENSLBEG00000005981	-	100	88.991	Labrus_bergylta
ENSORLG00000013938	rab11bb	100	99.083	ENSLBEG00000015248	rab11bb	100	99.083	Labrus_bergylta
ENSORLG00000013938	rab11bb	100	96.789	ENSLACG00000016857	-	100	96.789	Latimeria_chalumnae
ENSORLG00000013938	rab11bb	100	95.872	ENSMFAG00000003654	RAB11B	100	95.872	Macaca_fascicularis
ENSORLG00000013938	rab11bb	100	95.872	ENSMLEG00000030601	-	100	95.872	Mandrillus_leucophaeus
ENSORLG00000013938	rab11bb	100	96.330	ENSMAMG00000018533	-	100	96.330	Mastacembelus_armatus
ENSORLG00000013938	rab11bb	100	99.083	ENSMAMG00000006378	rab11bb	100	99.083	Mastacembelus_armatus
ENSORLG00000013938	rab11bb	100	97.248	ENSMZEG00005010975	-	100	97.248	Maylandia_zebra
ENSORLG00000013938	rab11bb	100	99.541	ENSMZEG00005003352	rab11bb	100	99.541	Maylandia_zebra
ENSORLG00000013938	rab11bb	100	95.872	ENSMICG00000034065	-	100	95.872	Microcebus_murinus
ENSORLG00000013938	rab11bb	99	95.392	ENSMMOG00000001238	-	99	95.392	Mola_mola
ENSORLG00000013938	rab11bb	94	99.512	ENSMMOG00000007917	rab11bb	100	99.512	Mola_mola
ENSORLG00000013938	rab11bb	100	97.248	ENSMMOG00000001250	-	100	97.248	Mola_mola
ENSORLG00000013938	rab11bb	100	96.789	ENSMODG00000003841	-	100	96.789	Monodelphis_domestica
ENSORLG00000013938	rab11bb	100	99.541	ENSMALG00000022187	rab11bb	100	99.541	Monopterus_albus
ENSORLG00000013938	rab11bb	94	87.440	ENSMLUG00000006677	-	100	87.440	Myotis_lucifugus
ENSORLG00000013938	rab11bb	100	99.541	ENSNBRG00000000372	rab11bb	100	99.541	Neolamprologus_brichardi
ENSORLG00000013938	rab11bb	100	97.248	ENSNBRG00000023885	-	100	97.248	Neolamprologus_brichardi
ENSORLG00000013938	rab11bb	100	96.789	ENSMEUG00000003686	-	100	96.789	Notamacropus_eugenii
ENSORLG00000013938	rab11bb	100	99.541	ENSONIG00000010435	rab11bb	100	99.541	Oreochromis_niloticus
ENSORLG00000013938	rab11bb	100	97.248	ENSONIG00000002544	-	100	97.248	Oreochromis_niloticus
ENSORLG00000013938	rab11bb	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSORLG00000013938	rab11bb	99	95.392	ENSORLG00020020844	RAB11B	99	95.392	Oryzias_latipes_hni
ENSORLG00000013938	rab11bb	100	100.000	ENSORLG00020019393	rab11bb	100	100.000	Oryzias_latipes_hni
ENSORLG00000013938	rab11bb	100	100.000	ENSORLG00015020173	rab11bb	100	100.000	Oryzias_latipes_hsok
ENSORLG00000013938	rab11bb	99	95.392	ENSORLG00015016999	RAB11B	99	95.392	Oryzias_latipes_hsok
ENSORLG00000013938	rab11bb	100	96.330	ENSOMEG00000002562	-	100	96.330	Oryzias_melastigma
ENSORLG00000013938	rab11bb	100	99.541	ENSOMEG00000017806	-	100	99.541	Oryzias_melastigma
ENSORLG00000013938	rab11bb	100	95.872	ENSPPAG00000028589	-	100	95.872	Pan_paniscus
ENSORLG00000013938	rab11bb	100	95.872	ENSPTRG00000010422	RAB11B	100	95.872	Pan_troglodytes
ENSORLG00000013938	rab11bb	100	95.872	ENSPANG00000007765	-	100	95.872	Papio_anubis
ENSORLG00000013938	rab11bb	100	98.624	ENSPKIG00000011640	rab11bb	100	98.624	Paramormyrops_kingsleyae
ENSORLG00000013938	rab11bb	98	96.729	ENSPKIG00000001389	-	69	96.729	Paramormyrops_kingsleyae
ENSORLG00000013938	rab11bb	100	98.165	ENSPKIG00000011703	-	100	98.165	Paramormyrops_kingsleyae
ENSORLG00000013938	rab11bb	98	92.694	ENSPSIG00000010242	-	85	92.694	Pelodiscus_sinensis
ENSORLG00000013938	rab11bb	100	99.541	ENSPMGG00000009435	rab11bb	100	99.541	Periophthalmus_magnuspinnatus
ENSORLG00000013938	rab11bb	99	92.627	ENSPMGG00000014336	-	99	92.627	Periophthalmus_magnuspinnatus
ENSORLG00000013938	rab11bb	100	96.330	ENSPMGG00000014333	-	100	96.330	Periophthalmus_magnuspinnatus
ENSORLG00000013938	rab11bb	97	95.283	ENSPCIG00000020371	-	99	95.283	Phascolarctos_cinereus
ENSORLG00000013938	rab11bb	100	99.541	ENSPFOG00000024114	-	100	99.541	Poecilia_formosa
ENSORLG00000013938	rab11bb	100	97.248	ENSPFOG00000006224	-	100	97.248	Poecilia_formosa
ENSORLG00000013938	rab11bb	100	97.248	ENSPLAG00000014207	-	100	97.248	Poecilia_latipinna
ENSORLG00000013938	rab11bb	100	99.541	ENSPLAG00000001598	rab11bb	100	99.541	Poecilia_latipinna
ENSORLG00000013938	rab11bb	100	97.248	ENSPMEG00000007842	-	100	97.248	Poecilia_mexicana
ENSORLG00000013938	rab11bb	100	99.541	ENSPMEG00000012389	rab11bb	100	99.541	Poecilia_mexicana
ENSORLG00000013938	rab11bb	100	96.789	ENSPREG00000006336	-	100	96.789	Poecilia_reticulata
ENSORLG00000013938	rab11bb	100	99.541	ENSPREG00000014269	rab11bb	100	99.541	Poecilia_reticulata
ENSORLG00000013938	rab11bb	100	97.248	ENSPNYG00000019611	-	100	97.248	Pundamilia_nyererei
ENSORLG00000013938	rab11bb	100	99.541	ENSPNYG00000004098	rab11bb	100	99.541	Pundamilia_nyererei
ENSORLG00000013938	rab11bb	100	95.872	ENSRROG00000037812	-	100	95.872	Rhinopithecus_roxellana
ENSORLG00000013938	rab11bb	97	95.755	ENSSHAG00000006816	-	97	95.755	Sarcophilus_harrisii
ENSORLG00000013938	rab11bb	100	74.771	ENSSFOG00015006245	-	100	74.771	Scleropages_formosus
ENSORLG00000013938	rab11bb	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSORLG00000013938	rab11bb	100	94.495	ENSSMAG00000018613	-	100	94.495	Scophthalmus_maximus
ENSORLG00000013938	rab11bb	100	99.083	ENSSMAG00000004922	rab11bb	100	99.083	Scophthalmus_maximus
ENSORLG00000013938	rab11bb	100	99.541	ENSSDUG00000013558	rab11bb	100	99.541	Seriola_dumerili
ENSORLG00000013938	rab11bb	100	97.248	ENSSDUG00000002934	-	100	97.248	Seriola_dumerili
ENSORLG00000013938	rab11bb	100	97.248	ENSSLDG00000005275	-	100	97.248	Seriola_lalandi_dorsalis
ENSORLG00000013938	rab11bb	100	99.541	ENSSLDG00000020676	rab11bb	100	99.541	Seriola_lalandi_dorsalis
ENSORLG00000013938	rab11bb	100	96.330	ENSSPUG00000002243	-	100	96.330	Sphenodon_punctatus
ENSORLG00000013938	rab11bb	100	97.248	ENSSPAG00000014559	-	100	97.248	Stegastes_partitus
ENSORLG00000013938	rab11bb	100	99.541	ENSSPAG00000011419	rab11bb	100	99.541	Stegastes_partitus
ENSORLG00000013938	rab11bb	100	96.789	ENSTGUG00000000084	-	100	96.789	Taeniopygia_guttata
ENSORLG00000013938	rab11bb	100	99.541	ENSTRUG00000022029	rab11bb	100	99.541	Takifugu_rubripes
ENSORLG00000013938	rab11bb	99	97.222	ENSTRUG00000021619	-	100	97.222	Takifugu_rubripes
ENSORLG00000013938	rab11bb	99	94.470	ENSTRUG00000021614	-	99	94.470	Takifugu_rubripes
ENSORLG00000013938	rab11bb	100	98.165	ENSTNIG00000011081	rab11bb	100	98.165	Tetraodon_nigroviridis
ENSORLG00000013938	rab11bb	93	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSORLG00000013938	rab11bb	99	97.222	ENSTNIG00000013182	-	100	97.222	Tetraodon_nigroviridis
ENSORLG00000013938	rab11bb	99	94.009	ENSTNIG00000013184	-	99	94.009	Tetraodon_nigroviridis
ENSORLG00000013938	rab11bb	94	96.585	ENSUAMG00000006639	-	99	96.585	Ursus_americanus
ENSORLG00000013938	rab11bb	100	96.804	ENSXETG00000025484	rab11b.1	99	96.804	Xenopus_tropicalis
ENSORLG00000013938	rab11bb	100	97.248	ENSXCOG00000009190	-	100	97.248	Xiphophorus_couchianus
ENSORLG00000013938	rab11bb	100	99.541	ENSXCOG00000008042	-	100	99.541	Xiphophorus_couchianus
ENSORLG00000013938	rab11bb	100	96.789	ENSXMAG00000024840	-	100	96.789	Xiphophorus_maculatus
ENSORLG00000013938	rab11bb	100	99.541	ENSXMAG00000011926	rab11bb	100	99.541	Xiphophorus_maculatus