EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000014168 (Gene tree)
Gene ID: 105354939
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC105354939
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 17022 bases
Position: chr1:32861228-32878249
Accession: 105354939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017770	zf-C2H2	PF00096.26	3.5e-21	1	5
ENSORLP00000017770	zf-C2H2	PF00096.26	3.5e-21	2	5
ENSORLP00000017770	zf-C2H2	PF00096.26	3.5e-21	3	5
ENSORLP00000017770	zf-C2H2	PF00096.26	3.5e-21	4	5
ENSORLP00000017770	zf-C2H2	PF00096.26	3.5e-21	5	5
ENSORLP00000031202	zf-C2H2	PF00096.26	3.1e-19	1	2
ENSORLP00000031202	zf-C2H2	PF00096.26	3.1e-19	2	2
ENSORLP00000017770	zf-met	PF12874.7	8.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000017771	-	1770	-	ENSORLP00000017770	589 (aa)	-	H2MGN2
ENSORLT00000029102	-	5040	XM_020706044	ENSORLP00000031202	1679 (aa)	XP_020561703	UPI0009D99F93

Gene Model

Click here to download ENSORLG00000014168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000014168	-	51	32.749	ENSORLG00000000076	ZNF319	87	32.749
ENSORLG00000014168	-	50	37.895	ENSORLG00000027982	-	98	48.936
ENSORLG00000014168	-	52	37.143	ENSORLG00000002268	-	87	38.961
ENSORLG00000014168	-	53	36.082	ENSORLG00000002307	-	90	39.623
ENSORLG00000014168	-	54	34.328	ENSORLG00000022825	-	59	34.328
ENSORLG00000014168	-	52	42.353	ENSORLG00000023744	-	92	42.353
ENSORLG00000014168	-	54	39.412	ENSORLG00000028381	-	94	39.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014168	-	69	37.870	ENSNBRG00000024051	-	70	37.870	Neolamprologus_brichardi
ENSORLG00000014168	-	69	37.692	ENSNBRG00000013838	-	98	37.692	Neolamprologus_brichardi
ENSORLG00000014168	-	91	79.109	ENSOMEG00000002552	-	99	79.109	Oryzias_melastigma
ENSORLG00000014168	-	51	40.278	ENSSLDG00000007500	-	82	40.606	Seriola_lalandi_dorsalis